co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G16595

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0002191: cap-dependent translational initiation	0.00E+00
2	GO:0042430: indole-containing compound metabolic process	0.00E+00
3	GO:0002376: immune system process	0.00E+00
4	GO:0010360: negative regulation of anion channel activity	0.00E+00
5	GO:0039694: viral RNA genome replication	0.00E+00
6	GO:0030149: sphingolipid catabolic process	0.00E+00
7	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
8	GO:0007141: male meiosis I	0.00E+00
9	GO:0006793: phosphorus metabolic process	0.00E+00
10	GO:0048227: plasma membrane to endosome transport	0.00E+00
11	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
12	GO:0010398: xylogalacturonan metabolic process	0.00E+00
13	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
14	GO:0001881: receptor recycling	0.00E+00
15	GO:0072722: response to amitrole	0.00E+00
16	GO:0006805: xenobiotic metabolic process	3.34E-04
17	GO:0006422: aspartyl-tRNA aminoacylation	3.34E-04
18	GO:0002143: tRNA wobble position uridine thiolation	3.34E-04
19	GO:1902361: mitochondrial pyruvate transmembrane transport	3.34E-04
20	GO:0010265: SCF complex assembly	3.34E-04
21	GO:0080120: CAAX-box protein maturation	3.34E-04
22	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	3.34E-04
23	GO:0071586: CAAX-box protein processing	3.34E-04
24	GO:0009819: drought recovery	3.55E-04
25	GO:0046685: response to arsenic-containing substance	5.24E-04
26	GO:0006468: protein phosphorylation	6.60E-04
27	GO:0006850: mitochondrial pyruvate transport	7.29E-04
28	GO:0019752: carboxylic acid metabolic process	7.29E-04
29	GO:1902000: homogentisate catabolic process	7.29E-04
30	GO:0019441: tryptophan catabolic process to kynurenine	7.29E-04
31	GO:0051592: response to calcium ion	7.29E-04
32	GO:0031648: protein destabilization	7.29E-04
33	GO:0015914: phospholipid transport	7.29E-04
34	GO:0010155: regulation of proton transport	7.29E-04
35	GO:0015706: nitrate transport	9.49E-04
36	GO:0010272: response to silver ion	1.18E-03
37	GO:0009072: aromatic amino acid family metabolic process	1.18E-03
38	GO:0048281: inflorescence morphogenesis	1.18E-03
39	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	1.18E-03
40	GO:0010359: regulation of anion channel activity	1.18E-03
41	GO:0008333: endosome to lysosome transport	1.18E-03
42	GO:0061158: 3'-UTR-mediated mRNA destabilization	1.18E-03
43	GO:0080055: low-affinity nitrate transport	1.18E-03
44	GO:0010351: lithium ion transport	1.18E-03
45	GO:0009410: response to xenobiotic stimulus	1.18E-03
46	GO:0006952: defense response	1.29E-03
47	GO:0010053: root epidermal cell differentiation	1.35E-03
48	GO:0072583: clathrin-dependent endocytosis	1.70E-03
49	GO:0006882: cellular zinc ion homeostasis	1.70E-03
50	GO:0001676: long-chain fatty acid metabolic process	1.70E-03
51	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.70E-03
52	GO:0048194: Golgi vesicle budding	1.70E-03
53	GO:0006874: cellular calcium ion homeostasis	1.84E-03
54	GO:0010150: leaf senescence	1.86E-03
55	GO:0046686: response to cadmium ion	2.05E-03
56	GO:0042742: defense response to bacterium	2.28E-03
57	GO:0010188: response to microbial phytotoxin	2.28E-03
58	GO:0046345: abscisic acid catabolic process	2.28E-03
59	GO:0033320: UDP-D-xylose biosynthetic process	2.28E-03
60	GO:0006364: rRNA processing	2.89E-03
61	GO:0030308: negative regulation of cell growth	2.91E-03
62	GO:0007029: endoplasmic reticulum organization	2.91E-03
63	GO:0048232: male gamete generation	3.60E-03
64	GO:0042732: D-xylose metabolic process	3.60E-03
65	GO:1902456: regulation of stomatal opening	3.60E-03
66	GO:1900425: negative regulation of defense response to bacterium	3.60E-03
67	GO:0018258: protein O-linked glycosylation via hydroxyproline	3.60E-03
68	GO:0035435: phosphate ion transmembrane transport	3.60E-03
69	GO:0010405: arabinogalactan protein metabolic process	3.60E-03
70	GO:0001731: formation of translation preinitiation complex	3.60E-03
71	GO:0006751: glutathione catabolic process	3.60E-03
72	GO:0006777: Mo-molybdopterin cofactor biosynthetic process	3.60E-03
73	GO:0006623: protein targeting to vacuole	3.81E-03
74	GO:0000302: response to reactive oxygen species	4.08E-03
75	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	4.33E-03
76	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.33E-03
77	GO:0007264: small GTPase mediated signal transduction	4.35E-03
78	GO:0043090: amino acid import	5.11E-03
79	GO:0006744: ubiquinone biosynthetic process	5.11E-03
80	GO:1900056: negative regulation of leaf senescence	5.11E-03
81	GO:0070370: cellular heat acclimation	5.11E-03
82	GO:0030026: cellular manganese ion homeostasis	5.11E-03
83	GO:1902074: response to salt	5.11E-03
84	GO:0050790: regulation of catalytic activity	5.11E-03
85	GO:0009615: response to virus	5.89E-03
86	GO:0006605: protein targeting	5.94E-03
87	GO:1900150: regulation of defense response to fungus	5.94E-03
88	GO:2000070: regulation of response to water deprivation	5.94E-03
89	GO:0000028: ribosomal small subunit assembly	5.94E-03
90	GO:0042128: nitrate assimilation	6.58E-03
91	GO:0045454: cell redox homeostasis	6.61E-03
92	GO:0006002: fructose 6-phosphate metabolic process	6.81E-03
93	GO:0015996: chlorophyll catabolic process	6.81E-03
94	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	6.81E-03
95	GO:0030968: endoplasmic reticulum unfolded protein response	6.81E-03
96	GO:0017004: cytochrome complex assembly	6.81E-03
97	GO:0009790: embryo development	7.35E-03
98	GO:0009821: alkaloid biosynthetic process	7.73E-03
99	GO:0009407: toxin catabolic process	8.49E-03
100	GO:0043067: regulation of programmed cell death	8.68E-03
101	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.68E-03
102	GO:0010043: response to zinc ion	8.91E-03
103	GO:0010629: negative regulation of gene expression	9.69E-03
104	GO:0055062: phosphate ion homeostasis	9.69E-03
105	GO:0006995: cellular response to nitrogen starvation	9.69E-03
106	GO:0051026: chiasma assembly	9.69E-03
107	GO:0006032: chitin catabolic process	9.69E-03
108	GO:0043069: negative regulation of programmed cell death	9.69E-03
109	GO:0010072: primary shoot apical meristem specification	1.07E-02
110	GO:0072593: reactive oxygen species metabolic process	1.07E-02
111	GO:0000272: polysaccharide catabolic process	1.07E-02
112	GO:0016485: protein processing	1.07E-02
113	GO:0007166: cell surface receptor signaling pathway	1.08E-02
114	GO:0010582: floral meristem determinacy	1.18E-02
115	GO:0009651: response to salt stress	1.24E-02
116	GO:0006626: protein targeting to mitochondrion	1.29E-02
117	GO:0010102: lateral root morphogenesis	1.29E-02
118	GO:0034605: cellular response to heat	1.41E-02
119	GO:0002237: response to molecule of bacterial origin	1.41E-02
120	GO:0007034: vacuolar transport	1.41E-02
121	GO:0006446: regulation of translational initiation	1.41E-02
122	GO:0009225: nucleotide-sugar metabolic process	1.53E-02
123	GO:0010167: response to nitrate	1.53E-02
124	GO:0070588: calcium ion transmembrane transport	1.53E-02
125	GO:0034976: response to endoplasmic reticulum stress	1.65E-02
126	GO:0006970: response to osmotic stress	1.74E-02
127	GO:0000027: ribosomal large subunit assembly	1.77E-02
128	GO:0009863: salicylic acid mediated signaling pathway	1.77E-02
129	GO:0030150: protein import into mitochondrial matrix	1.77E-02
130	GO:2000377: regulation of reactive oxygen species metabolic process	1.77E-02
131	GO:0016998: cell wall macromolecule catabolic process	2.03E-02
132	GO:0009814: defense response, incompatible interaction	2.17E-02
133	GO:0007131: reciprocal meiotic recombination	2.17E-02
134	GO:0010200: response to chitin	2.17E-02
135	GO:0007005: mitochondrion organization	2.17E-02
136	GO:0031348: negative regulation of defense response	2.17E-02
137	GO:0009620: response to fungus	2.22E-02
138	GO:0009625: response to insect	2.31E-02
139	GO:0010227: floral organ abscission	2.31E-02
140	GO:0006012: galactose metabolic process	2.31E-02
141	GO:0050832: defense response to fungus	2.34E-02
142	GO:0009553: embryo sac development	2.36E-02
143	GO:0010091: trichome branching	2.45E-02
144	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	2.60E-02
145	GO:0042147: retrograde transport, endosome to Golgi	2.60E-02
146	GO:0042631: cellular response to water deprivation	2.74E-02
147	GO:0010501: RNA secondary structure unwinding	2.74E-02
148	GO:0010087: phloem or xylem histogenesis	2.74E-02
149	GO:0008360: regulation of cell shape	2.89E-02
150	GO:0006520: cellular amino acid metabolic process	2.89E-02
151	GO:0045489: pectin biosynthetic process	2.89E-02
152	GO:0006662: glycerol ether metabolic process	2.89E-02
153	GO:0009737: response to abscisic acid	3.02E-02
154	GO:0009646: response to absence of light	3.05E-02
155	GO:0006814: sodium ion transport	3.05E-02
156	GO:0042752: regulation of circadian rhythm	3.05E-02
157	GO:0015031: protein transport	3.19E-02
158	GO:0032259: methylation	3.21E-02
159	GO:0010193: response to ozone	3.36E-02
160	GO:0009409: response to cold	3.54E-02
161	GO:0030163: protein catabolic process	3.69E-02
162	GO:0006310: DNA recombination	3.85E-02
163	GO:0051607: defense response to virus	4.19E-02
164	GO:0009607: response to biotic stimulus	4.54E-02
165	GO:0009627: systemic acquired resistance	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0051670: inulinase activity	0.00E+00
4	GO:0070577: lysine-acetylated histone binding	0.00E+00
5	GO:0098808: mRNA cap binding	0.00E+00
6	GO:0050220: prostaglandin-E synthase activity	0.00E+00
7	GO:0061605: molybdopterin-synthase adenylyltransferase activity	0.00E+00
8	GO:0016504: peptidase activator activity	0.00E+00
9	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
10	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
11	GO:0032442: phenylcoumaran benzylic ether reductase activity	0.00E+00
12	GO:0015370: solute:sodium symporter activity	0.00E+00
13	GO:0061604: molybdopterin-synthase sulfurtransferase activity	0.00E+00
14	GO:0005524: ATP binding	1.11E-05
15	GO:0004557: alpha-galactosidase activity	1.79E-05
16	GO:0052692: raffinose alpha-galactosidase activity	1.79E-05
17	GO:0030515: snoRNA binding	2.83E-04
18	GO:0004815: aspartate-tRNA ligase activity	3.34E-04
19	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	3.34E-04
20	GO:0051669: fructan beta-fructosidase activity	3.34E-04
21	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	3.34E-04
22	GO:0031219: levanase activity	3.34E-04
23	GO:0042134: rRNA primary transcript binding	3.34E-04
24	GO:0032050: clathrin heavy chain binding	3.34E-04
25	GO:0004713: protein tyrosine kinase activity	7.22E-04
26	GO:0004061: arylformamidase activity	7.29E-04
27	GO:0043141: ATP-dependent 5'-3' DNA helicase activity	7.29E-04
28	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.07E-03
29	GO:0008430: selenium binding	1.18E-03
30	GO:0003840: gamma-glutamyltransferase activity	1.18E-03
31	GO:0036374: glutathione hydrolase activity	1.18E-03
32	GO:0050833: pyruvate transmembrane transporter activity	1.18E-03
33	GO:0016805: dipeptidase activity	1.18E-03
34	GO:0080054: low-affinity nitrate transmembrane transporter activity	1.18E-03
35	GO:0005093: Rab GDP-dissociation inhibitor activity	1.18E-03
36	GO:0008265: Mo-molybdopterin cofactor sulfurase activity	1.18E-03
37	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.70E-03
38	GO:0004792: thiosulfate sulfurtransferase activity	1.70E-03
39	GO:0031176: endo-1,4-beta-xylanase activity	1.70E-03
40	GO:0004364: glutathione transferase activity	1.88E-03
41	GO:0015369: calcium:proton antiporter activity	2.28E-03
42	GO:0070628: proteasome binding	2.28E-03
43	GO:0004301: epoxide hydrolase activity	2.28E-03
44	GO:0015204: urea transmembrane transporter activity	2.28E-03
45	GO:0015368: calcium:cation antiporter activity	2.28E-03
46	GO:0015293: symporter activity	2.29E-03
47	GO:0008641: small protein activating enzyme activity	2.91E-03
48	GO:0004040: amidase activity	2.91E-03
49	GO:0005496: steroid binding	2.91E-03
50	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	2.91E-03
51	GO:1990714: hydroxyproline O-galactosyltransferase activity	3.60E-03
52	GO:0031593: polyubiquitin binding	3.60E-03
53	GO:0035252: UDP-xylosyltransferase activity	3.60E-03
54	GO:0030976: thiamine pyrophosphate binding	3.60E-03
55	GO:0048040: UDP-glucuronate decarboxylase activity	3.60E-03
56	GO:0043531: ADP binding	4.17E-03
57	GO:0102391: decanoate--CoA ligase activity	4.33E-03
58	GO:0004012: phospholipid-translocating ATPase activity	4.33E-03
59	GO:0004602: glutathione peroxidase activity	4.33E-03
60	GO:0003978: UDP-glucose 4-epimerase activity	4.33E-03
61	GO:0070403: NAD+ binding	4.33E-03
62	GO:0016301: kinase activity	4.44E-03
63	GO:0015035: protein disulfide oxidoreductase activity	4.70E-03
64	GO:0016831: carboxy-lyase activity	5.11E-03
65	GO:0008235: metalloexopeptidase activity	5.11E-03
66	GO:0003872: 6-phosphofructokinase activity	5.11E-03
67	GO:0008320: protein transmembrane transporter activity	5.11E-03
68	GO:0043295: glutathione binding	5.11E-03
69	GO:0004467: long-chain fatty acid-CoA ligase activity	5.11E-03
70	GO:0052747: sinapyl alcohol dehydrogenase activity	5.94E-03
71	GO:0015491: cation:cation antiporter activity	5.94E-03
72	GO:0004714: transmembrane receptor protein tyrosine kinase activity	5.94E-03
73	GO:0003843: 1,3-beta-D-glucan synthase activity	6.81E-03
74	GO:0004683: calmodulin-dependent protein kinase activity	6.94E-03
75	GO:0071949: FAD binding	7.73E-03
76	GO:0003678: DNA helicase activity	7.73E-03
77	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	8.32E-03
78	GO:0016844: strictosidine synthase activity	8.68E-03
79	GO:0015112: nitrate transmembrane transporter activity	8.68E-03
80	GO:0004568: chitinase activity	9.69E-03
81	GO:0003746: translation elongation factor activity	9.77E-03
82	GO:0005543: phospholipid binding	1.07E-02
83	GO:0008794: arsenate reductase (glutaredoxin) activity	1.07E-02
84	GO:0001054: RNA polymerase I activity	1.07E-02
85	GO:0004177: aminopeptidase activity	1.07E-02
86	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.07E-02
87	GO:0008378: galactosyltransferase activity	1.18E-02
88	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.18E-02
89	GO:0005515: protein binding	1.28E-02
90	GO:0005516: calmodulin binding	1.29E-02
91	GO:0005388: calcium-transporting ATPase activity	1.29E-02
92	GO:0000175: 3'-5'-exoribonuclease activity	1.29E-02
93	GO:0005315: inorganic phosphate transmembrane transporter activity	1.29E-02
94	GO:0004674: protein serine/threonine kinase activity	1.29E-02
95	GO:0004175: endopeptidase activity	1.41E-02
96	GO:0004535: poly(A)-specific ribonuclease activity	1.41E-02
97	GO:0005198: structural molecule activity	1.42E-02
98	GO:0008168: methyltransferase activity	1.51E-02
99	GO:0008061: chitin binding	1.53E-02
100	GO:0003712: transcription cofactor activity	1.53E-02
101	GO:0004970: ionotropic glutamate receptor activity	1.53E-02
102	GO:0005217: intracellular ligand-gated ion channel activity	1.53E-02
103	GO:0004190: aspartic-type endopeptidase activity	1.53E-02
104	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	1.71E-02
105	GO:0016887: ATPase activity	1.76E-02
106	GO:0003954: NADH dehydrogenase activity	1.77E-02
107	GO:0005509: calcium ion binding	1.86E-02
108	GO:0004540: ribonuclease activity	2.03E-02
109	GO:0004298: threonine-type endopeptidase activity	2.03E-02
110	GO:0008408: 3'-5' exonuclease activity	2.03E-02
111	GO:0003756: protein disulfide isomerase activity	2.45E-02
112	GO:0003727: single-stranded RNA binding	2.45E-02
113	GO:0008026: ATP-dependent helicase activity	2.58E-02
114	GO:0047134: protein-disulfide reductase activity	2.60E-02
115	GO:0004791: thioredoxin-disulfide reductase activity	3.05E-02
116	GO:0004197: cysteine-type endopeptidase activity	3.52E-02
117	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.69E-02
118	GO:0008483: transaminase activity	4.02E-02
119	GO:0051213: dioxygenase activity	4.37E-02
120	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.72E-02
121	GO:0004721: phosphoprotein phosphatase activity	4.90E-02
122	GO:0004004: ATP-dependent RNA helicase activity	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0034457: Mpp10 complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0034455: t-UTP complex	0.00E+00
5	GO:0005829: cytosol	2.28E-05
6	GO:0005783: endoplasmic reticulum	5.56E-05
7	GO:0005773: vacuole	1.59E-04
8	GO:0030014: CCR4-NOT complex	3.34E-04
9	GO:0034388: Pwp2p-containing subcomplex of 90S preribosome	3.34E-04
10	GO:0005789: endoplasmic reticulum membrane	6.55E-04
11	GO:0031304: intrinsic component of mitochondrial inner membrane	7.29E-04
12	GO:0030134: ER to Golgi transport vesicle	7.29E-04
13	GO:0005886: plasma membrane	8.19E-04
14	GO:0032040: small-subunit processome	9.49E-04
15	GO:0031461: cullin-RING ubiquitin ligase complex	1.70E-03
16	GO:0005839: proteasome core complex	2.02E-03
17	GO:0048046: apoplast	2.38E-03
18	GO:0005746: mitochondrial respiratory chain	2.91E-03
19	GO:0005945: 6-phosphofructokinase complex	2.91E-03
20	GO:0030904: retromer complex	3.60E-03
21	GO:0016282: eukaryotic 43S preinitiation complex	3.60E-03
22	GO:0005771: multivesicular body	3.60E-03
23	GO:0016363: nuclear matrix	4.33E-03
24	GO:0033290: eukaryotic 48S preinitiation complex	4.33E-03
25	GO:0005801: cis-Golgi network	4.33E-03
26	GO:0016272: prefoldin complex	4.33E-03
27	GO:0000794: condensed nuclear chromosome	5.11E-03
28	GO:0005794: Golgi apparatus	5.55E-03
29	GO:0016021: integral component of membrane	5.84E-03
30	GO:0031305: integral component of mitochondrial inner membrane	5.94E-03
31	GO:0019773: proteasome core complex, alpha-subunit complex	6.81E-03
32	GO:0000148: 1,3-beta-D-glucan synthase complex	6.81E-03
33	GO:0000326: protein storage vacuole	6.81E-03
34	GO:0016020: membrane	7.46E-03
35	GO:0005736: DNA-directed RNA polymerase I complex	7.73E-03
36	GO:0015030: Cajal body	8.68E-03
37	GO:0030125: clathrin vesicle coat	9.69E-03
38	GO:0017119: Golgi transport complex	9.69E-03
39	GO:0005819: spindle	1.07E-02
40	GO:0031902: late endosome membrane	1.16E-02
41	GO:0031307: integral component of mitochondrial outer membrane	1.18E-02
42	GO:0019013: viral nucleocapsid	1.29E-02
43	GO:0005764: lysosome	1.41E-02
44	GO:0030176: integral component of endoplasmic reticulum membrane	1.53E-02
45	GO:0043234: protein complex	1.65E-02
46	GO:0005730: nucleolus	1.96E-02
47	GO:0005744: mitochondrial inner membrane presequence translocase complex	2.45E-02
48	GO:0000790: nuclear chromatin	2.60E-02
49	GO:0009504: cell plate	3.20E-02
50	GO:0019898: extrinsic component of membrane	3.20E-02
51	GO:0009524: phragmoplast	3.21E-02
52	GO:0005802: trans-Golgi network	4.29E-02
53	GO:0030529: intracellular ribonucleoprotein complex	4.37E-02
54	GO:0005788: endoplasmic reticulum lumen	4.54E-02
55	GO:0005887: integral component of plasma membrane	4.93E-02