co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G15480

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0032780: negative regulation of ATPase activity	0.00E+00
2	GO:0006482: protein demethylation	0.00E+00
3	GO:0070482: response to oxygen levels	0.00E+00
4	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
5	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
6	GO:0010360: negative regulation of anion channel activity	0.00E+00
7	GO:0016559: peroxisome fission	3.42E-05
8	GO:0035266: meristem growth	7.23E-05
9	GO:0007292: female gamete generation	7.23E-05
10	GO:0015760: glucose-6-phosphate transport	7.23E-05
11	GO:1902361: mitochondrial pyruvate transmembrane transport	7.23E-05
12	GO:0000266: mitochondrial fission	1.10E-04
13	GO:0009308: amine metabolic process	1.74E-04
14	GO:0009156: ribonucleoside monophosphate biosynthetic process	1.74E-04
15	GO:0051788: response to misfolded protein	1.74E-04
16	GO:0015712: hexose phosphate transport	1.74E-04
17	GO:0006850: mitochondrial pyruvate transport	1.74E-04
18	GO:0034976: response to endoplasmic reticulum stress	1.85E-04
19	GO:0007005: mitochondrion organization	2.78E-04
20	GO:0016226: iron-sulfur cluster assembly	2.78E-04
21	GO:0060968: regulation of gene silencing	2.93E-04
22	GO:0015714: phosphoenolpyruvate transport	2.93E-04
23	GO:0035436: triose phosphate transmembrane transport	2.93E-04
24	GO:0051176: positive regulation of sulfur metabolic process	2.93E-04
25	GO:0006986: response to unfolded protein	4.23E-04
26	GO:0001676: long-chain fatty acid metabolic process	4.23E-04
27	GO:0006809: nitric oxide biosynthetic process	4.23E-04
28	GO:0009165: nucleotide biosynthetic process	5.65E-04
29	GO:0010109: regulation of photosynthesis	5.65E-04
30	GO:0015713: phosphoglycerate transport	5.65E-04
31	GO:0042991: transcription factor import into nucleus	5.65E-04
32	GO:0006914: autophagy	6.19E-04
33	GO:0009247: glycolipid biosynthetic process	7.14E-04
34	GO:0046283: anthocyanin-containing compound metabolic process	7.14E-04
35	GO:0048827: phyllome development	8.73E-04
36	GO:0048232: male gamete generation	8.73E-04
37	GO:0043248: proteasome assembly	8.73E-04
38	GO:0070814: hydrogen sulfide biosynthetic process	8.73E-04
39	GO:1900425: negative regulation of defense response to bacterium	8.73E-04
40	GO:0009643: photosynthetic acclimation	8.73E-04
41	GO:0006014: D-ribose metabolic process	8.73E-04
42	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	8.73E-04
43	GO:0048280: vesicle fusion with Golgi apparatus	1.04E-03
44	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	1.21E-03
45	GO:0006614: SRP-dependent cotranslational protein targeting to membrane	1.21E-03
46	GO:0006605: protein targeting	1.40E-03
47	GO:0019375: galactolipid biosynthetic process	1.40E-03
48	GO:0010078: maintenance of root meristem identity	1.40E-03
49	GO:2000070: regulation of response to water deprivation	1.40E-03
50	GO:0030968: endoplasmic reticulum unfolded protein response	1.59E-03
51	GO:0009657: plastid organization	1.59E-03
52	GO:0090333: regulation of stomatal closure	1.80E-03
53	GO:0048829: root cap development	2.23E-03
54	GO:0010629: negative regulation of gene expression	2.23E-03
55	GO:0006896: Golgi to vacuole transport	2.23E-03
56	GO:0000103: sulfate assimilation	2.23E-03
57	GO:0009408: response to heat	2.24E-03
58	GO:0010015: root morphogenesis	2.46E-03
59	GO:0010105: negative regulation of ethylene-activated signaling pathway	2.70E-03
60	GO:0009266: response to temperature stimulus	3.19E-03
61	GO:0009933: meristem structural organization	3.19E-03
62	GO:0090351: seedling development	3.44E-03
63	GO:0009116: nucleoside metabolic process	3.98E-03
64	GO:0031408: oxylipin biosynthetic process	4.54E-03
65	GO:0030433: ubiquitin-dependent ERAD pathway	4.83E-03
66	GO:0016117: carotenoid biosynthetic process	5.74E-03
67	GO:0042147: retrograde transport, endosome to Golgi	5.74E-03
68	GO:0019252: starch biosynthetic process	7.04E-03
69	GO:0006623: protein targeting to vacuole	7.04E-03
70	GO:0048825: cotyledon development	7.04E-03
71	GO:0009749: response to glucose	7.04E-03
72	GO:0002229: defense response to oomycetes	7.38E-03
73	GO:0000302: response to reactive oxygen species	7.38E-03
74	GO:0006891: intra-Golgi vesicle-mediated transport	7.38E-03
75	GO:0009630: gravitropism	7.72E-03
76	GO:0007264: small GTPase mediated signal transduction	7.72E-03
77	GO:1901657: glycosyl compound metabolic process	8.07E-03
78	GO:0006464: cellular protein modification process	8.43E-03
79	GO:0071805: potassium ion transmembrane transport	8.79E-03
80	GO:0010200: response to chitin	9.74E-03
81	GO:0006888: ER to Golgi vesicle-mediated transport	1.07E-02
82	GO:0010311: lateral root formation	1.19E-02
83	GO:0006499: N-terminal protein myristoylation	1.23E-02
84	GO:0009910: negative regulation of flower development	1.27E-02
85	GO:0045087: innate immune response	1.36E-02
86	GO:0006631: fatty acid metabolic process	1.54E-02
87	GO:0009744: response to sucrose	1.63E-02
88	GO:0051707: response to other organism	1.63E-02
89	GO:0009644: response to high light intensity	1.72E-02
90	GO:0009965: leaf morphogenesis	1.77E-02
91	GO:0009873: ethylene-activated signaling pathway	1.80E-02
92	GO:0005975: carbohydrate metabolic process	1.93E-02
93	GO:0006813: potassium ion transport	2.01E-02
94	GO:0009736: cytokinin-activated signaling pathway	2.01E-02
95	GO:0048367: shoot system development	2.31E-02
96	GO:0009626: plant-type hypersensitive response	2.37E-02
97	GO:0009738: abscisic acid-activated signaling pathway	2.40E-02
98	GO:0009624: response to nematode	2.58E-02
99	GO:0009058: biosynthetic process	3.15E-02
100	GO:0055114: oxidation-reduction process	3.19E-02
101	GO:0006511: ubiquitin-dependent protein catabolic process	3.36E-02
102	GO:0009790: embryo development	3.38E-02
103	GO:0016036: cellular response to phosphate starvation	3.63E-02
104	GO:0010150: leaf senescence	3.81E-02
105	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	4.13E-02
106	GO:0006351: transcription, DNA-templated	4.94E-02
107	GO:0042742: defense response to bacterium	4.98E-02

Rank	GO Term	Adjusted P value
1	GO:0042030: ATPase inhibitor activity	0.00E+00
2	GO:0008901: ferredoxin hydrogenase activity	0.00E+00
3	GO:0051723: protein methylesterase activity	0.00E+00
4	GO:0052596: phenethylamine:oxygen oxidoreductase (deaminating) activity	7.23E-05
5	GO:0052594: aminoacetone:oxygen oxidoreductase(deaminating) activity	7.23E-05
6	GO:0019786: Atg8-specific protease activity	7.23E-05
7	GO:0052593: tryptamine:oxygen oxidoreductase (deaminating) activity	7.23E-05
8	GO:0052595: aliphatic-amine oxidase activity	7.23E-05
9	GO:0046481: digalactosyldiacylglycerol synthase activity	7.23E-05
10	GO:0015152: glucose-6-phosphate transmembrane transporter activity	1.74E-04
11	GO:0019779: Atg8 activating enzyme activity	1.74E-04
12	GO:0004781: sulfate adenylyltransferase (ATP) activity	2.93E-04
13	GO:0071917: triose-phosphate transmembrane transporter activity	2.93E-04
14	GO:0052692: raffinose alpha-galactosidase activity	2.93E-04
15	GO:0005047: signal recognition particle binding	2.93E-04
16	GO:0004557: alpha-galactosidase activity	2.93E-04
17	GO:0050833: pyruvate transmembrane transporter activity	2.93E-04
18	GO:0004749: ribose phosphate diphosphokinase activity	4.23E-04
19	GO:0035250: UDP-galactosyltransferase activity	4.23E-04
20	GO:0004301: epoxide hydrolase activity	5.65E-04
21	GO:0015120: phosphoglycerate transmembrane transporter activity	5.65E-04
22	GO:0019776: Atg8 ligase activity	5.65E-04
23	GO:0009916: alternative oxidase activity	5.65E-04
24	GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	7.14E-04
25	GO:0051213: dioxygenase activity	7.34E-04
26	GO:0036402: proteasome-activating ATPase activity	8.73E-04
27	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	1.04E-03
28	GO:0004747: ribokinase activity	1.04E-03
29	GO:0051539: 4 iron, 4 sulfur cluster binding	1.34E-03
30	GO:0008865: fructokinase activity	1.40E-03
31	GO:0008047: enzyme activator activity	2.23E-03
32	GO:0003924: GTPase activity	2.24E-03
33	GO:0008794: arsenate reductase (glutaredoxin) activity	2.46E-03
34	GO:0005515: protein binding	2.82E-03
35	GO:0005388: calcium-transporting ATPase activity	2.94E-03
36	GO:0005315: inorganic phosphate transmembrane transporter activity	2.94E-03
37	GO:0008131: primary amine oxidase activity	3.19E-03
38	GO:0017025: TBP-class protein binding	3.44E-03
39	GO:0051536: iron-sulfur cluster binding	3.98E-03
40	GO:0043424: protein histidine kinase binding	4.26E-03
41	GO:0015079: potassium ion transmembrane transporter activity	4.26E-03
42	GO:0005524: ATP binding	5.75E-03
43	GO:0004872: receptor activity	7.04E-03
44	GO:0048038: quinone binding	7.38E-03
45	GO:0043565: sequence-specific DNA binding	8.56E-03
46	GO:0005525: GTP binding	8.71E-03
47	GO:0008483: transaminase activity	8.79E-03
48	GO:0016597: amino acid binding	9.16E-03
49	GO:0102483: scopolin beta-glucosidase activity	1.07E-02
50	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.36E-02
51	GO:0003746: translation elongation factor activity	1.36E-02
52	GO:0000149: SNARE binding	1.45E-02
53	GO:0008422: beta-glucosidase activity	1.45E-02
54	GO:0009055: electron carrier activity	1.50E-02
55	GO:0005484: SNAP receptor activity	1.63E-02
56	GO:0046872: metal ion binding	1.96E-02
57	GO:0003700: transcription factor activity, sequence-specific DNA binding	2.14E-02
58	GO:0008234: cysteine-type peptidase activity	2.16E-02
59	GO:0016301: kinase activity	2.48E-02
60	GO:0015035: protein disulfide oxidoreductase activity	2.64E-02
61	GO:0008026: ATP-dependent helicase activity	2.69E-02
62	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.27E-02
63	GO:0030246: carbohydrate binding	3.33E-02
64	GO:0015297: antiporter activity	3.69E-02
65	GO:0008194: UDP-glycosyltransferase activity	4.13E-02

Rank	GO Term	Adjusted P value
1	GO:0005785: signal recognition particle receptor complex	0.00E+00
2	GO:0046862: chromoplast membrane	0.00E+00
3	GO:0005778: peroxisomal membrane	3.28E-05
4	GO:0005741: mitochondrial outer membrane	2.53E-04
5	GO:0005782: peroxisomal matrix	2.93E-04
6	GO:0005775: vacuolar lumen	4.23E-04
7	GO:0000323: lytic vacuole	4.23E-04
8	GO:0005776: autophagosome	5.65E-04
9	GO:0030140: trans-Golgi network transport vesicle	8.73E-04
10	GO:0031597: cytosolic proteasome complex	1.04E-03
11	GO:0031595: nuclear proteasome complex	1.21E-03
12	GO:0031305: integral component of mitochondrial inner membrane	1.40E-03
13	GO:0012507: ER to Golgi transport vesicle membrane	1.40E-03
14	GO:0000421: autophagosome membrane	1.40E-03
15	GO:0005786: signal recognition particle, endoplasmic reticulum targeting	1.59E-03
16	GO:0016604: nuclear body	2.01E-03
17	GO:0008540: proteasome regulatory particle, base subcomplex	2.01E-03
18	GO:0048471: perinuclear region of cytoplasm	2.46E-03
19	GO:0005773: vacuole	2.66E-03
20	GO:0031307: integral component of mitochondrial outer membrane	2.70E-03
21	GO:0070469: respiratory chain	4.26E-03
22	GO:0005783: endoplasmic reticulum	4.56E-03
23	GO:0031410: cytoplasmic vesicle	4.83E-03
24	GO:0005770: late endosome	6.38E-03
25	GO:0009707: chloroplast outer membrane	1.15E-02
26	GO:0000325: plant-type vacuole	1.27E-02
27	GO:0031201: SNARE complex	1.54E-02
28	GO:0031902: late endosome membrane	1.54E-02
29	GO:0000502: proteasome complex	2.01E-02
30	GO:0005635: nuclear envelope	2.11E-02
31	GO:0005829: cytosol	2.56E-02
32	GO:0005777: peroxisome	2.84E-02
33	GO:0005654: nucleoplasm	2.97E-02