co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G15290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080094: response to trehalose-6-phosphate	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0006096: glycolytic process	5.56E-05
4	GO:0019510: S-adenosylhomocysteine catabolic process	1.23E-04
5	GO:0060627: regulation of vesicle-mediated transport	1.23E-04
6	GO:0006169: adenosine salvage	1.23E-04
7	GO:0006695: cholesterol biosynthetic process	2.86E-04
8	GO:0033353: S-adenosylmethionine cycle	2.86E-04
9	GO:0080183: response to photooxidative stress	2.86E-04
10	GO:0015774: polysaccharide transport	2.86E-04
11	GO:0006729: tetrahydrobiopterin biosynthetic process	2.86E-04
12	GO:0090506: axillary shoot meristem initiation	4.72E-04
13	GO:0009062: fatty acid catabolic process	4.72E-04
14	GO:0016556: mRNA modification	6.76E-04
15	GO:0055070: copper ion homeostasis	6.76E-04
16	GO:0007231: osmosensory signaling pathway	6.76E-04
17	GO:0033500: carbohydrate homeostasis	8.97E-04
18	GO:0031122: cytoplasmic microtubule organization	8.97E-04
19	GO:0006546: glycine catabolic process	8.97E-04
20	GO:0009956: radial pattern formation	8.97E-04
21	GO:0046686: response to cadmium ion	1.01E-03
22	GO:0010236: plastoquinone biosynthetic process	1.13E-03
23	GO:0044209: AMP salvage	1.13E-03
24	GO:0006633: fatty acid biosynthetic process	1.33E-03
25	GO:0006086: acetyl-CoA biosynthetic process from pyruvate	1.39E-03
26	GO:0009955: adaxial/abaxial pattern specification	1.66E-03
27	GO:0010067: procambium histogenesis	1.66E-03
28	GO:1901259: chloroplast rRNA processing	1.66E-03
29	GO:0017148: negative regulation of translation	1.66E-03
30	GO:0006694: steroid biosynthetic process	1.66E-03
31	GO:0010189: vitamin E biosynthetic process	1.66E-03
32	GO:0071555: cell wall organization	1.77E-03
33	GO:0010196: nonphotochemical quenching	1.95E-03
34	GO:0007155: cell adhesion	2.26E-03
35	GO:0048564: photosystem I assembly	2.26E-03
36	GO:0032544: plastid translation	2.58E-03
37	GO:0009808: lignin metabolic process	2.58E-03
38	GO:0006098: pentose-phosphate shunt	2.91E-03
39	GO:0045337: farnesyl diphosphate biosynthetic process	2.91E-03
40	GO:0033384: geranyl diphosphate biosynthetic process	2.91E-03
41	GO:0048589: developmental growth	2.91E-03
42	GO:0019538: protein metabolic process	3.62E-03
43	GO:0042538: hyperosmotic salinity response	3.83E-03
44	GO:0010015: root morphogenesis	4.00E-03
45	GO:0006816: calcium ion transport	4.00E-03
46	GO:0006415: translational termination	4.00E-03
47	GO:0018119: peptidyl-cysteine S-nitrosylation	4.00E-03
48	GO:0006094: gluconeogenesis	4.79E-03
49	GO:0006869: lipid transport	4.82E-03
50	GO:0010020: chloroplast fission	5.20E-03
51	GO:0009933: meristem structural organization	5.20E-03
52	GO:0010223: secondary shoot formation	5.20E-03
53	GO:0046688: response to copper ion	5.63E-03
54	GO:0070588: calcium ion transmembrane transport	5.63E-03
55	GO:0055114: oxidation-reduction process	6.40E-03
56	GO:0007010: cytoskeleton organization	6.51E-03
57	GO:0008299: isoprenoid biosynthetic process	6.98E-03
58	GO:0007017: microtubule-based process	6.98E-03
59	GO:0030245: cellulose catabolic process	7.93E-03
60	GO:0006730: one-carbon metabolic process	7.93E-03
61	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	8.43E-03
62	GO:0009294: DNA mediated transformation	8.43E-03
63	GO:0009411: response to UV	8.43E-03
64	GO:0001944: vasculature development	8.43E-03
65	GO:0019722: calcium-mediated signaling	8.93E-03
66	GO:0010089: xylem development	8.93E-03
67	GO:0042335: cuticle development	9.99E-03
68	GO:0010087: phloem or xylem histogenesis	9.99E-03
69	GO:0010305: leaf vascular tissue pattern formation	1.05E-02
70	GO:0006412: translation	1.08E-02
71	GO:0009409: response to cold	1.15E-02
72	GO:0006635: fatty acid beta-oxidation	1.22E-02
73	GO:0016132: brassinosteroid biosynthetic process	1.22E-02
74	GO:0016032: viral process	1.28E-02
75	GO:0009828: plant-type cell wall loosening	1.40E-02
76	GO:0010286: heat acclimation	1.46E-02
77	GO:0007267: cell-cell signaling	1.46E-02
78	GO:0009826: unidimensional cell growth	1.51E-02
79	GO:0009658: chloroplast organization	1.56E-02
80	GO:0016126: sterol biosynthetic process	1.58E-02
81	GO:0010027: thylakoid membrane organization	1.58E-02
82	GO:0042254: ribosome biogenesis	1.59E-02
83	GO:0015995: chlorophyll biosynthetic process	1.78E-02
84	GO:0009817: defense response to fungus, incompatible interaction	1.91E-02
85	GO:0018298: protein-chromophore linkage	1.91E-02
86	GO:0080167: response to karrikin	1.94E-02
87	GO:0048767: root hair elongation	1.98E-02
88	GO:0000160: phosphorelay signal transduction system	1.98E-02
89	GO:0009834: plant-type secondary cell wall biogenesis	2.05E-02
90	GO:0007568: aging	2.12E-02
91	GO:0015979: photosynthesis	2.22E-02
92	GO:0045454: cell redox homeostasis	2.33E-02
93	GO:0006839: mitochondrial transport	2.48E-02
94	GO:0006631: fatty acid metabolic process	2.56E-02
95	GO:0008152: metabolic process	3.16E-02
96	GO:0009664: plant-type cell wall organization	3.19E-02
97	GO:0009736: cytokinin-activated signaling pathway	3.35E-02
98	GO:0048367: shoot system development	3.86E-02
99	GO:0042545: cell wall modification	4.22E-02
100	GO:0005975: carbohydrate metabolic process	4.72E-02

Rank	GO Term	Adjusted P value
1	GO:0050614: delta24-sterol reductase activity	0.00E+00
2	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
3	GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity	0.00E+00
4	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
5	GO:0050613: delta14-sterol reductase activity	0.00E+00
6	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
7	GO:0051738: xanthophyll binding	0.00E+00
8	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	7.73E-07
9	GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity	6.84E-06
10	GO:0019843: rRNA binding	7.99E-06
11	GO:0051920: peroxiredoxin activity	4.51E-05
12	GO:0016209: antioxidant activity	7.88E-05
13	GO:0047259: glucomannan 4-beta-mannosyltransferase activity	1.23E-04
14	GO:0004560: alpha-L-fucosidase activity	1.23E-04
15	GO:0004013: adenosylhomocysteinase activity	1.23E-04
16	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	1.23E-04
17	GO:0004001: adenosine kinase activity	1.23E-04
18	GO:0008568: microtubule-severing ATPase activity	1.23E-04
19	GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity	1.23E-04
20	GO:0005080: protein kinase C binding	1.23E-04
21	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.23E-04
22	GO:0008809: carnitine racemase activity	1.23E-04
23	GO:0004047: aminomethyltransferase activity	2.86E-04
24	GO:0008967: phosphoglycolate phosphatase activity	2.86E-04
25	GO:0003913: DNA photolyase activity	4.72E-04
26	GO:0004148: dihydrolipoyl dehydrogenase activity	4.72E-04
27	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	6.76E-04
28	GO:0004165: dodecenoyl-CoA delta-isomerase activity	6.76E-04
29	GO:0016491: oxidoreductase activity	7.25E-04
30	GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity	8.97E-04
31	GO:0016836: hydro-lyase activity	8.97E-04
32	GO:0005200: structural constituent of cytoskeleton	1.30E-03
33	GO:0004332: fructose-bisphosphate aldolase activity	1.39E-03
34	GO:0102391: decanoate--CoA ligase activity	1.66E-03
35	GO:0051753: mannan synthase activity	1.66E-03
36	GO:0009881: photoreceptor activity	1.95E-03
37	GO:0004467: long-chain fatty acid-CoA ligase activity	1.95E-03
38	GO:0005544: calcium-dependent phospholipid binding	2.26E-03
39	GO:0004033: aldo-keto reductase (NADP) activity	2.26E-03
40	GO:0004337: geranyltranstransferase activity	2.91E-03
41	GO:0003747: translation release factor activity	2.91E-03
42	GO:0005198: structural molecule activity	3.43E-03
43	GO:0004161: dimethylallyltranstransferase activity	4.00E-03
44	GO:0047372: acylglycerol lipase activity	4.00E-03
45	GO:0004565: beta-galactosidase activity	4.79E-03
46	GO:0031072: heat shock protein binding	4.79E-03
47	GO:0005262: calcium channel activity	4.79E-03
48	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	5.20E-03
49	GO:0030599: pectinesterase activity	5.49E-03
50	GO:0003924: GTPase activity	5.60E-03
51	GO:0003735: structural constituent of ribosome	5.90E-03
52	GO:0033612: receptor serine/threonine kinase binding	7.45E-03
53	GO:0003824: catalytic activity	8.35E-03
54	GO:0008810: cellulase activity	8.43E-03
55	GO:0022891: substrate-specific transmembrane transporter activity	8.43E-03
56	GO:0008289: lipid binding	8.51E-03
57	GO:0005102: receptor binding	9.45E-03
58	GO:0000156: phosphorelay response regulator activity	1.34E-02
59	GO:0016759: cellulose synthase activity	1.40E-02
60	GO:0008483: transaminase activity	1.46E-02
61	GO:0016722: oxidoreductase activity, oxidizing metal ions	1.46E-02
62	GO:0004601: peroxidase activity	1.56E-02
63	GO:0016168: chlorophyll binding	1.65E-02
64	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	1.65E-02
65	GO:0005507: copper ion binding	1.82E-02
66	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.85E-02
67	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.12E-02
68	GO:0030145: manganese ion binding	2.12E-02
69	GO:0005525: GTP binding	2.18E-02
70	GO:0009055: electron carrier activity	3.08E-02
71	GO:0051287: NAD binding	3.11E-02
72	GO:0045330: aspartyl esterase activity	3.60E-02
73	GO:0045735: nutrient reservoir activity	3.78E-02
74	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.04E-02
75	GO:0004650: polygalacturonase activity	4.04E-02
76	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.04E-02
77	GO:0051082: unfolded protein binding	4.31E-02
78	GO:0016757: transferase activity, transferring glycosyl groups	4.47E-02

Rank	GO Term	Adjusted P value
1	GO:0009507: chloroplast	1.41E-15
2	GO:0009941: chloroplast envelope	2.70E-12
3	GO:0009534: chloroplast thylakoid	4.36E-10
4	GO:0009570: chloroplast stroma	3.43E-09
5	GO:0048046: apoplast	5.90E-08
6	GO:0009579: thylakoid	1.14E-07
7	GO:0046658: anchored component of plasma membrane	3.40E-05
8	GO:0005618: cell wall	3.45E-05
9	GO:0009535: chloroplast thylakoid membrane	1.35E-04
10	GO:0009505: plant-type cell wall	1.42E-04
11	GO:0031225: anchored component of membrane	2.39E-04
12	GO:0045254: pyruvate dehydrogenase complex	2.86E-04
13	GO:0005840: ribosome	4.58E-04
14	GO:0015630: microtubule cytoskeleton	6.76E-04
15	GO:0009517: PSII associated light-harvesting complex II	8.97E-04
16	GO:0055035: plastid thylakoid membrane	1.13E-03
17	GO:0016020: membrane	1.39E-03
18	GO:0009533: chloroplast stromal thylakoid	1.95E-03
19	GO:0009986: cell surface	1.95E-03
20	GO:0015934: large ribosomal subunit	2.17E-03
21	GO:0009536: plastid	2.53E-03
22	GO:0009539: photosystem II reaction center	2.58E-03
23	GO:0045298: tubulin complex	2.91E-03
24	GO:0005763: mitochondrial small ribosomal subunit	2.91E-03
25	GO:0030176: integral component of endoplasmic reticulum membrane	5.63E-03
26	GO:0009706: chloroplast inner membrane	5.83E-03
27	GO:0010287: plastoglobule	6.91E-03
28	GO:0009654: photosystem II oxygen evolving complex	6.98E-03
29	GO:0042651: thylakoid membrane	6.98E-03
30	GO:0009543: chloroplast thylakoid lumen	7.30E-03
31	GO:0015935: small ribosomal subunit	7.45E-03
32	GO:0009532: plastid stroma	7.45E-03
33	GO:0022626: cytosolic ribosome	1.10E-02
34	GO:0009523: photosystem II	1.16E-02
35	GO:0005886: plasma membrane	1.39E-02
36	GO:0005778: peroxisomal membrane	1.46E-02
37	GO:0005874: microtubule	1.88E-02
38	GO:0005802: trans-Golgi network	2.11E-02
39	GO:0005576: extracellular region	2.45E-02
40	GO:0005768: endosome	2.47E-02
41	GO:0031977: thylakoid lumen	2.56E-02
42	GO:0009506: plasmodesma	2.60E-02
43	GO:0005856: cytoskeleton	2.95E-02
44	GO:0043231: intracellular membrane-bounded organelle	3.16E-02
45	GO:0005773: vacuole	3.17E-02
46	GO:0000139: Golgi membrane	4.10E-02
47	GO:0005794: Golgi apparatus	4.76E-02