Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G04780

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1905499: trichome papilla formation0.00E+00
2GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
3GO:0080094: response to trehalose-6-phosphate0.00E+00
4GO:0007638: mechanosensory behavior0.00E+00
5GO:0006065: UDP-glucuronate biosynthetic process2.75E-06
6GO:0046739: transport of virus in multicellular host6.48E-06
7GO:0071555: cell wall organization6.87E-05
8GO:0010583: response to cyclopentenone6.93E-05
9GO:0007267: cell-cell signaling9.19E-05
10GO:0010497: plasmodesmata-mediated intercellular transport9.46E-05
11GO:0010442: guard cell morphogenesis1.20E-04
12GO:0010729: positive regulation of hydrogen peroxide biosynthetic process1.20E-04
13GO:0019510: S-adenosylhomocysteine catabolic process1.20E-04
14GO:0060627: regulation of vesicle-mediated transport1.20E-04
15GO:0006169: adenosine salvage1.20E-04
16GO:0015774: polysaccharide transport2.77E-04
17GO:2000123: positive regulation of stomatal complex development2.77E-04
18GO:0043039: tRNA aminoacylation2.77E-04
19GO:0052541: plant-type cell wall cellulose metabolic process2.77E-04
20GO:0033353: S-adenosylmethionine cycle2.77E-04
21GO:0042546: cell wall biogenesis3.31E-04
22GO:0090506: axillary shoot meristem initiation4.58E-04
23GO:0019722: calcium-mediated signaling6.39E-04
24GO:0007231: osmosensory signaling pathway6.57E-04
25GO:0051016: barbed-end actin filament capping6.57E-04
26GO:0000271: polysaccharide biosynthetic process7.45E-04
27GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway8.72E-04
28GO:0009956: radial pattern formation8.72E-04
29GO:0009765: photosynthesis, light harvesting8.72E-04
30GO:0006183: GTP biosynthetic process8.72E-04
31GO:0000919: cell plate assembly8.72E-04
32GO:0033500: carbohydrate homeostasis8.72E-04
33GO:2000038: regulation of stomatal complex development8.72E-04
34GO:0071554: cell wall organization or biogenesis9.78E-04
35GO:0016123: xanthophyll biosynthetic process1.10E-03
36GO:0044209: AMP salvage1.10E-03
37GO:0006665: sphingolipid metabolic process1.10E-03
38GO:0010375: stomatal complex patterning1.10E-03
39GO:0048359: mucilage metabolic process involved in seed coat development1.10E-03
40GO:0016120: carotene biosynthetic process1.10E-03
41GO:0006633: fatty acid biosynthetic process1.26E-03
42GO:0016126: sterol biosynthetic process1.39E-03
43GO:0045490: pectin catabolic process1.42E-03
44GO:0006694: steroid biosynthetic process1.61E-03
45GO:0009955: adaxial/abaxial pattern specification1.61E-03
46GO:0010067: procambium histogenesis1.61E-03
47GO:1901259: chloroplast rRNA processing1.61E-03
48GO:0010411: xyloglucan metabolic process1.63E-03
49GO:0051693: actin filament capping1.89E-03
50GO:0071669: plant-type cell wall organization or biogenesis1.89E-03
51GO:0032544: plastid translation2.50E-03
52GO:0009808: lignin metabolic process2.50E-03
53GO:0009932: cell tip growth2.50E-03
54GO:0000902: cell morphogenesis2.82E-03
55GO:0015780: nucleotide-sugar transport2.82E-03
56GO:0042761: very long-chain fatty acid biosynthetic process3.16E-03
57GO:0005975: carbohydrate metabolic process3.40E-03
58GO:0042538: hyperosmotic salinity response3.66E-03
59GO:0018119: peptidyl-cysteine S-nitrosylation3.88E-03
60GO:0010015: root morphogenesis3.88E-03
61GO:0006816: calcium ion transport3.88E-03
62GO:0030036: actin cytoskeleton organization4.64E-03
63GO:0050826: response to freezing4.64E-03
64GO:0048367: shoot system development4.79E-03
65GO:0007015: actin filament organization5.04E-03
66GO:0010223: secondary shoot formation5.04E-03
67GO:0010020: chloroplast fission5.04E-03
68GO:0009933: meristem structural organization5.04E-03
69GO:0009408: response to heat5.29E-03
70GO:0070588: calcium ion transmembrane transport5.46E-03
71GO:0006071: glycerol metabolic process5.88E-03
72GO:0010025: wax biosynthetic process5.88E-03
73GO:0009414: response to water deprivation6.54E-03
74GO:0006418: tRNA aminoacylation for protein translation6.76E-03
75GO:0010026: trichome differentiation6.76E-03
76GO:0030245: cellulose catabolic process7.69E-03
77GO:0006730: one-carbon metabolic process7.69E-03
78GO:0009294: DNA mediated transformation8.18E-03
79GO:0001944: vasculature development8.18E-03
80GO:0010089: xylem development8.66E-03
81GO:0010091: trichome branching8.66E-03
82GO:0016117: carotenoid biosynthetic process9.17E-03
83GO:0010087: phloem or xylem histogenesis9.68E-03
84GO:0042335: cuticle development9.68E-03
85GO:0009741: response to brassinosteroid1.02E-02
86GO:0045489: pectin biosynthetic process1.02E-02
87GO:0010305: leaf vascular tissue pattern formation1.02E-02
88GO:0016132: brassinosteroid biosynthetic process1.18E-02
89GO:0002229: defense response to oomycetes1.18E-02
90GO:0016032: viral process1.24E-02
91GO:0007264: small GTPase mediated signal transduction1.24E-02
92GO:0016125: sterol metabolic process1.36E-02
93GO:0009826: unidimensional cell growth1.44E-02
94GO:0006970: response to osmotic stress1.61E-02
95GO:0030244: cellulose biosynthetic process1.85E-02
96GO:0009832: plant-type cell wall biogenesis1.92E-02
97GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.92E-02
98GO:0009813: flavonoid biosynthetic process1.92E-02
99GO:0009834: plant-type secondary cell wall biogenesis1.99E-02
100GO:0007568: aging2.05E-02
101GO:0016051: carbohydrate biosynthetic process2.19E-02
102GO:0006631: fatty acid metabolic process2.48E-02
103GO:0051707: response to other organism2.63E-02
104GO:0008643: carbohydrate transport2.78E-02
105GO:0055114: oxidation-reduction process2.85E-02
106GO:0051603: proteolysis involved in cellular protein catabolic process3.33E-02
107GO:0006857: oligopeptide transport3.41E-02
108GO:0009409: response to cold3.89E-02
109GO:0009742: brassinosteroid mediated signaling pathway4.35E-02
110GO:0009735: response to cytokinin4.44E-02
RankGO TermAdjusted P value
1GO:0050613: delta14-sterol reductase activity0.00E+00
2GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
3GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
4GO:0050614: delta24-sterol reductase activity0.00E+00
5GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
6GO:0004496: mevalonate kinase activity0.00E+00
7GO:0045435: lycopene epsilon cyclase activity0.00E+00
8GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity0.00E+00
9GO:0003979: UDP-glucose 6-dehydrogenase activity2.75E-06
10GO:0030570: pectate lyase activity2.70E-05
11GO:0051753: mannan synthase activity4.28E-05
12GO:0005544: calcium-dependent phospholipid binding7.49E-05
13GO:0009374: biotin binding1.20E-04
14GO:0047259: glucomannan 4-beta-mannosyltransferase activity1.20E-04
15GO:0004013: adenosylhomocysteinase activity1.20E-04
16GO:0004831: tyrosine-tRNA ligase activity1.20E-04
17GO:0004001: adenosine kinase activity1.20E-04
18GO:0003938: IMP dehydrogenase activity2.77E-04
19GO:0004312: fatty acid synthase activity2.77E-04
20GO:0051287: NAD binding4.03E-04
21GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity4.58E-04
22GO:0004148: dihydrolipoyl dehydrogenase activity4.58E-04
23GO:0005504: fatty acid binding4.58E-04
24GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity6.57E-04
25GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor6.57E-04
26GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds7.77E-04
27GO:0045430: chalcone isomerase activity8.72E-04
28GO:0046527: glucosyltransferase activity8.72E-04
29GO:0005507: copper ion binding8.87E-04
30GO:0016762: xyloglucan:xyloglucosyl transferase activity9.78E-04
31GO:0003989: acetyl-CoA carboxylase activity1.10E-03
32GO:0009922: fatty acid elongase activity1.10E-03
33GO:0051011: microtubule minus-end binding1.10E-03
34GO:0016722: oxidoreductase activity, oxidizing metal ions1.24E-03
35GO:0016413: O-acetyltransferase activity1.32E-03
36GO:0051920: peroxiredoxin activity1.61E-03
37GO:0016798: hydrolase activity, acting on glycosyl bonds1.63E-03
38GO:0016209: antioxidant activity2.19E-03
39GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors2.82E-03
40GO:0008889: glycerophosphodiester phosphodiesterase activity2.82E-03
41GO:0005516: calmodulin binding4.32E-03
42GO:0005262: calcium channel activity4.64E-03
43GO:0004565: beta-galactosidase activity4.64E-03
44GO:0004650: polygalacturonase activity5.10E-03
45GO:0019843: rRNA binding6.98E-03
46GO:0033612: receptor serine/threonine kinase binding7.22E-03
47GO:0016829: lyase activity7.55E-03
48GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity7.69E-03
49GO:0016760: cellulose synthase (UDP-forming) activity8.18E-03
50GO:0008810: cellulase activity8.18E-03
51GO:0008514: organic anion transmembrane transporter activity8.66E-03
52GO:0004812: aminoacyl-tRNA ligase activity9.17E-03
53GO:0005102: receptor binding9.17E-03
54GO:0019901: protein kinase binding1.13E-02
55GO:0051015: actin filament binding1.30E-02
56GO:0016759: cellulose synthase activity1.36E-02
57GO:0030145: manganese ion binding2.05E-02
58GO:0016614: oxidoreductase activity, acting on CH-OH group of donors2.05E-02
59GO:0004871: signal transducer activity2.33E-02
60GO:0004185: serine-type carboxypeptidase activity2.63E-02
61GO:0003924: GTPase activity2.74E-02
62GO:0009055: electron carrier activity2.94E-02
63GO:0003690: double-stranded DNA binding3.33E-02
64GO:0045735: nutrient reservoir activity3.66E-02
65GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.74E-02
66GO:0030599: pectinesterase activity4.00E-02
67GO:0022857: transmembrane transporter activity4.00E-02
68GO:0016758: transferase activity, transferring hexosyl groups4.80E-02
69GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.99E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0048046: apoplast3.76E-11
3GO:0031225: anchored component of membrane7.58E-11
4GO:0046658: anchored component of plasma membrane3.30E-09
5GO:0005886: plasma membrane1.41E-06
6GO:0009506: plasmodesma8.98E-06
7GO:0009505: plant-type cell wall1.93E-05
8GO:0005618: cell wall2.90E-05
9GO:0009986: cell surface5.77E-05
10GO:0009923: fatty acid elongase complex1.20E-04
11GO:0005576: extracellular region1.40E-04
12GO:0008290: F-actin capping protein complex2.77E-04
13GO:0009317: acetyl-CoA carboxylase complex4.58E-04
14GO:0009570: chloroplast stroma5.92E-04
15GO:0009579: thylakoid6.54E-04
16GO:0015934: large ribosomal subunit2.08E-03
17GO:0009941: chloroplast envelope2.61E-03
18GO:0016020: membrane2.66E-03
19GO:0000139: Golgi membrane2.78E-03
20GO:0005763: mitochondrial small ribosomal subunit2.82E-03
21GO:0005876: spindle microtubule3.16E-03
22GO:0005884: actin filament3.88E-03
23GO:0030176: integral component of endoplasmic reticulum membrane5.46E-03
24GO:0005875: microtubule associated complex5.88E-03
25GO:0009536: plastid9.23E-03
26GO:0005615: extracellular space1.08E-02
27GO:0016021: integral component of membrane1.34E-02
28GO:0009507: chloroplast1.48E-02
29GO:0005794: Golgi apparatus1.89E-02
30GO:0005840: ribosome2.83E-02
31GO:0005856: cytoskeleton2.85E-02
32GO:0005773: vacuole2.94E-02
33GO:0005774: vacuolar membrane4.30E-02
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Gene type



Gene DE type