co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02370

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0010360: negative regulation of anion channel activity	0.00E+00
2	GO:2001253: regulation of histone H3-K36 trimethylation	0.00E+00
3	GO:0032497: detection of lipopolysaccharide	0.00E+00
4	GO:0006987: activation of signaling protein activity involved in unfolded protein response	0.00E+00
5	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
6	GO:0006983: ER overload response	0.00E+00
7	GO:0010793: regulation of mRNA export from nucleus	0.00E+00
8	GO:0000188: inactivation of MAPK activity	0.00E+00
9	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
10	GO:0006182: cGMP biosynthetic process	0.00E+00
11	GO:0006592: ornithine biosynthetic process	0.00E+00
12	GO:0051788: response to misfolded protein	3.02E-06
13	GO:0010150: leaf senescence	1.87E-05
14	GO:0006014: D-ribose metabolic process	1.04E-04
15	GO:0043248: proteasome assembly	1.04E-04
16	GO:0016559: peroxisome fission	2.38E-04
17	GO:0006481: C-terminal protein methylation	2.55E-04
18	GO:0010941: regulation of cell death	2.55E-04
19	GO:1901183: positive regulation of camalexin biosynthetic process	2.55E-04
20	GO:0035344: hypoxanthine transport	2.55E-04
21	GO:1902361: mitochondrial pyruvate transmembrane transport	2.55E-04
22	GO:0010265: SCF complex assembly	2.55E-04
23	GO:0098721: uracil import across plasma membrane	2.55E-04
24	GO:0042759: long-chain fatty acid biosynthetic process	2.55E-04
25	GO:0006144: purine nucleobase metabolic process	2.55E-04
26	GO:0098702: adenine import across plasma membrane	2.55E-04
27	GO:1903648: positive regulation of chlorophyll catabolic process	2.55E-04
28	GO:0048455: stamen formation	2.55E-04
29	GO:0035266: meristem growth	2.55E-04
30	GO:0098710: guanine import across plasma membrane	2.55E-04
31	GO:0048363: mucilage pectin metabolic process	2.55E-04
32	GO:0071596: ubiquitin-dependent protein catabolic process via the N-end rule pathway	2.55E-04
33	GO:0007292: female gamete generation	2.55E-04
34	GO:0019628: urate catabolic process	2.55E-04
35	GO:0010120: camalexin biosynthetic process	2.94E-04
36	GO:0006468: protein phosphorylation	4.02E-04
37	GO:0008202: steroid metabolic process	4.21E-04
38	GO:0043069: negative regulation of programmed cell death	4.92E-04
39	GO:0009727: detection of ethylene stimulus	5.64E-04
40	GO:0006672: ceramide metabolic process	5.64E-04
41	GO:0043066: negative regulation of apoptotic process	5.64E-04
42	GO:0006850: mitochondrial pyruvate transport	5.64E-04
43	GO:0015865: purine nucleotide transport	5.64E-04
44	GO:0051258: protein polymerization	5.64E-04
45	GO:0042325: regulation of phosphorylation	5.64E-04
46	GO:0019441: tryptophan catabolic process to kynurenine	5.64E-04
47	GO:0080183: response to photooxidative stress	5.64E-04
48	GO:0050684: regulation of mRNA processing	5.64E-04
49	GO:0050994: regulation of lipid catabolic process	5.64E-04
50	GO:0000266: mitochondrial fission	6.51E-04
51	GO:0046777: protein autophosphorylation	6.54E-04
52	GO:0010311: lateral root formation	6.95E-04
53	GO:1900055: regulation of leaf senescence	9.15E-04
54	GO:0032784: regulation of DNA-templated transcription, elongation	9.15E-04
55	GO:0010359: regulation of anion channel activity	9.15E-04
56	GO:0010476: gibberellin mediated signaling pathway	9.15E-04
57	GO:0010325: raffinose family oligosaccharide biosynthetic process	9.15E-04
58	GO:0060968: regulation of gene silencing	9.15E-04
59	GO:0046902: regulation of mitochondrial membrane permeability	1.31E-03
60	GO:0072334: UDP-galactose transmembrane transport	1.31E-03
61	GO:0009399: nitrogen fixation	1.31E-03
62	GO:0080001: mucilage extrusion from seed coat	1.31E-03
63	GO:0046513: ceramide biosynthetic process	1.31E-03
64	GO:0010116: positive regulation of abscisic acid biosynthetic process	1.31E-03
65	GO:2001289: lipid X metabolic process	1.31E-03
66	GO:0070301: cellular response to hydrogen peroxide	1.31E-03
67	GO:0051260: protein homooligomerization	1.37E-03
68	GO:0042991: transcription factor import into nucleus	1.75E-03
69	GO:0006542: glutamine biosynthetic process	1.75E-03
70	GO:0010222: stem vascular tissue pattern formation	1.75E-03
71	GO:0033320: UDP-D-xylose biosynthetic process	1.75E-03
72	GO:0009939: positive regulation of gibberellic acid mediated signaling pathway	1.75E-03
73	GO:0048015: phosphatidylinositol-mediated signaling	2.23E-03
74	GO:0006090: pyruvate metabolic process	2.23E-03
75	GO:0007029: endoplasmic reticulum organization	2.23E-03
76	GO:0010225: response to UV-C	2.23E-03
77	GO:0048367: shoot system development	2.26E-03
78	GO:0048366: leaf development	2.54E-03
79	GO:0019252: starch biosynthetic process	2.57E-03
80	GO:1902456: regulation of stomatal opening	2.75E-03
81	GO:1900425: negative regulation of defense response to bacterium	2.75E-03
82	GO:0002238: response to molecule of fungal origin	2.75E-03
83	GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly	2.75E-03
84	GO:0006561: proline biosynthetic process	2.75E-03
85	GO:0048827: phyllome development	2.75E-03
86	GO:0048232: male gamete generation	2.75E-03
87	GO:0042732: D-xylose metabolic process	2.75E-03
88	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.30E-03
89	GO:0048280: vesicle fusion with Golgi apparatus	3.30E-03
90	GO:0048444: floral organ morphogenesis	3.30E-03
91	GO:1900057: positive regulation of leaf senescence	3.89E-03
92	GO:1902074: response to salt	3.89E-03
93	GO:0048528: post-embryonic root development	3.89E-03
94	GO:1900056: negative regulation of leaf senescence	3.89E-03
95	GO:0010029: regulation of seed germination	4.20E-03
96	GO:1900150: regulation of defense response to fungus	4.52E-03
97	GO:0010078: maintenance of root meristem identity	4.52E-03
98	GO:2000070: regulation of response to water deprivation	4.52E-03
99	GO:0009827: plant-type cell wall modification	5.18E-03
100	GO:0006526: arginine biosynthetic process	5.18E-03
101	GO:0030968: endoplasmic reticulum unfolded protein response	5.18E-03
102	GO:0009808: lignin metabolic process	5.18E-03
103	GO:0048364: root development	5.30E-03
104	GO:0006499: N-terminal protein myristoylation	5.71E-03
105	GO:0009821: alkaloid biosynthetic process	5.86E-03
106	GO:0009056: catabolic process	5.86E-03
107	GO:0007338: single fertilization	5.86E-03
108	GO:0009051: pentose-phosphate shunt, oxidative branch	5.86E-03
109	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	6.33E-03
110	GO:0006470: protein dephosphorylation	6.51E-03
111	GO:0007166: cell surface receptor signaling pathway	6.51E-03
112	GO:0045087: innate immune response	6.56E-03
113	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.58E-03
114	GO:0016310: phosphorylation	6.71E-03
115	GO:0006896: Golgi to vacuole transport	7.33E-03
116	GO:0048829: root cap development	7.33E-03
117	GO:0010629: negative regulation of gene expression	7.33E-03
118	GO:0046686: response to cadmium ion	7.76E-03
119	GO:0006897: endocytosis	7.80E-03
120	GO:0072593: reactive oxygen species metabolic process	8.11E-03
121	GO:0010015: root morphogenesis	8.11E-03
122	GO:0000038: very long-chain fatty acid metabolic process	8.11E-03
123	GO:0071365: cellular response to auxin stimulus	8.92E-03
124	GO:0006108: malate metabolic process	9.75E-03
125	GO:0055046: microgametogenesis	9.75E-03
126	GO:0009718: anthocyanin-containing compound biosynthetic process	9.75E-03
127	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	1.03E-02
128	GO:0009933: meristem structural organization	1.06E-02
129	GO:0010167: response to nitrate	1.15E-02
130	GO:0090351: seedling development	1.15E-02
131	GO:0046854: phosphatidylinositol phosphorylation	1.15E-02
132	GO:0009225: nucleotide-sugar metabolic process	1.15E-02
133	GO:0007031: peroxisome organization	1.15E-02
134	GO:0034976: response to endoplasmic reticulum stress	1.24E-02
135	GO:0009733: response to auxin	1.32E-02
136	GO:2000377: regulation of reactive oxygen species metabolic process	1.34E-02
137	GO:0005992: trehalose biosynthetic process	1.34E-02
138	GO:0006096: glycolytic process	1.35E-02
139	GO:0009737: response to abscisic acid	1.42E-02
140	GO:0009620: response to fungus	1.49E-02
141	GO:0016998: cell wall macromolecule catabolic process	1.53E-02
142	GO:0045454: cell redox homeostasis	1.58E-02
143	GO:0030433: ubiquitin-dependent ERAD pathway	1.64E-02
144	GO:0007005: mitochondrion organization	1.64E-02
145	GO:0009742: brassinosteroid mediated signaling pathway	1.73E-02
146	GO:0071369: cellular response to ethylene stimulus	1.74E-02
147	GO:0006012: galactose metabolic process	1.74E-02
148	GO:0006817: phosphate ion transport	1.85E-02
149	GO:0006511: ubiquitin-dependent protein catabolic process	1.88E-02
150	GO:0042147: retrograde transport, endosome to Golgi	1.95E-02
151	GO:0009751: response to salicylic acid	2.03E-02
152	GO:0009408: response to heat	2.06E-02
153	GO:0010087: phloem or xylem histogenesis	2.07E-02
154	GO:0046323: glucose import	2.18E-02
155	GO:0048544: recognition of pollen	2.29E-02
156	GO:0042752: regulation of circadian rhythm	2.29E-02
157	GO:0006623: protein targeting to vacuole	2.41E-02
158	GO:0048825: cotyledon development	2.41E-02
159	GO:0009749: response to glucose	2.41E-02
160	GO:0071554: cell wall organization or biogenesis	2.53E-02
161	GO:0006891: intra-Golgi vesicle-mediated transport	2.53E-02
162	GO:0006635: fatty acid beta-oxidation	2.53E-02
163	GO:0006633: fatty acid biosynthetic process	2.57E-02
164	GO:0010583: response to cyclopentenone	2.65E-02
165	GO:0009630: gravitropism	2.65E-02
166	GO:0030163: protein catabolic process	2.78E-02
167	GO:0009873: ethylene-activated signaling pathway	2.84E-02
168	GO:0010252: auxin homeostasis	2.90E-02
169	GO:0006914: autophagy	2.90E-02
170	GO:0009567: double fertilization forming a zygote and endosperm	2.90E-02
171	GO:0009739: response to gibberellin	3.16E-02
172	GO:0009615: response to virus	3.29E-02
173	GO:0009617: response to bacterium	3.37E-02
174	GO:0009816: defense response to bacterium, incompatible interaction	3.42E-02
175	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	3.42E-02
176	GO:0006974: cellular response to DNA damage stimulus	3.56E-02
177	GO:0042128: nitrate assimilation	3.56E-02
178	GO:0006888: ER to Golgi vesicle-mediated transport	3.70E-02
179	GO:0006950: response to stress	3.70E-02
180	GO:0048767: root hair elongation	4.12E-02
181	GO:0009407: toxin catabolic process	4.26E-02
182	GO:0010119: regulation of stomatal movement	4.41E-02
183	GO:0035556: intracellular signal transduction	4.50E-02
184	GO:0006970: response to osmotic stress	4.69E-02
185	GO:0009867: jasmonic acid mediated signaling pathway	4.70E-02
186	GO:0016051: carbohydrate biosynthetic process	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
2	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
3	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
4	GO:0004846: urate oxidase activity	0.00E+00
5	GO:0008777: acetylornithine deacetylase activity	0.00E+00
6	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
7	GO:0017017: MAP kinase tyrosine/serine/threonine phosphatase activity	0.00E+00
8	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
9	GO:0016301: kinase activity	6.56E-08
10	GO:0004674: protein serine/threonine kinase activity	6.96E-05
11	GO:0005524: ATP binding	7.88E-05
12	GO:0004747: ribokinase activity	1.43E-04
13	GO:0008865: fructokinase activity	2.38E-04
14	GO:0016303: 1-phosphatidylinositol-3-kinase activity	2.55E-04
15	GO:0015208: guanine transmembrane transporter activity	2.55E-04
16	GO:0015294: solute:cation symporter activity	2.55E-04
17	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	2.55E-04
18	GO:0015207: adenine transmembrane transporter activity	2.55E-04
19	GO:0019707: protein-cysteine S-acyltransferase activity	2.55E-04
20	GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity	2.55E-04
21	GO:0015168: glycerol transmembrane transporter activity	2.55E-04
22	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	2.55E-04
23	GO:0008142: oxysterol binding	2.94E-04
24	GO:0030955: potassium ion binding	4.21E-04
25	GO:0004743: pyruvate kinase activity	4.21E-04
26	GO:0032934: sterol binding	5.64E-04
27	GO:0004061: arylformamidase activity	5.64E-04
28	GO:0015036: disulfide oxidoreductase activity	5.64E-04
29	GO:0010331: gibberellin binding	5.64E-04
30	GO:0050291: sphingosine N-acyltransferase activity	5.64E-04
31	GO:0000975: regulatory region DNA binding	9.15E-04
32	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.15E-04
33	GO:0050833: pyruvate transmembrane transporter activity	9.15E-04
34	GO:0004383: guanylate cyclase activity	9.15E-04
35	GO:0016805: dipeptidase activity	9.15E-04
36	GO:0016595: glutamate binding	9.15E-04
37	GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity	9.15E-04
38	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.31E-03
39	GO:0004300: enoyl-CoA hydratase activity	1.31E-03
40	GO:0005354: galactose transmembrane transporter activity	1.31E-03
41	GO:0001653: peptide receptor activity	1.31E-03
42	GO:0015210: uracil transmembrane transporter activity	1.75E-03
43	GO:0004470: malic enzyme activity	1.75E-03
44	GO:0010279: indole-3-acetic acid amido synthetase activity	1.75E-03
45	GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor	1.75E-03
46	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	1.75E-03
47	GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity	1.75E-03
48	GO:0008948: oxaloacetate decarboxylase activity	2.23E-03
49	GO:0005496: steroid binding	2.23E-03
50	GO:0005471: ATP:ADP antiporter activity	2.23E-03
51	GO:0004356: glutamate-ammonia ligase activity	2.23E-03
52	GO:0005459: UDP-galactose transmembrane transporter activity	2.23E-03
53	GO:0015145: monosaccharide transmembrane transporter activity	2.23E-03
54	GO:0031593: polyubiquitin binding	2.75E-03
55	GO:0004556: alpha-amylase activity	2.75E-03
56	GO:0036402: proteasome-activating ATPase activity	2.75E-03
57	GO:0048040: UDP-glucuronate decarboxylase activity	2.75E-03
58	GO:0102391: decanoate--CoA ligase activity	3.30E-03
59	GO:0004012: phospholipid-translocating ATPase activity	3.30E-03
60	GO:0003978: UDP-glucose 4-epimerase activity	3.30E-03
61	GO:0070403: NAD+ binding	3.30E-03
62	GO:0004467: long-chain fatty acid-CoA ligase activity	3.89E-03
63	GO:0008235: metalloexopeptidase activity	3.89E-03
64	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	5.18E-03
65	GO:0004630: phospholipase D activity	5.18E-03
66	GO:0071949: FAD binding	5.86E-03
67	GO:0016844: strictosidine synthase activity	6.58E-03
68	GO:0004713: protein tyrosine kinase activity	7.33E-03
69	GO:0008171: O-methyltransferase activity	7.33E-03
70	GO:0004177: aminopeptidase activity	8.11E-03
71	GO:0047372: acylglycerol lipase activity	8.11E-03
72	GO:0004364: glutathione transferase activity	8.13E-03
73	GO:0004521: endoribonuclease activity	8.92E-03
74	GO:0000287: magnesium ion binding	9.35E-03
75	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.75E-03
76	GO:0019888: protein phosphatase regulator activity	9.75E-03
77	GO:0017025: TBP-class protein binding	1.15E-02
78	GO:0004725: protein tyrosine phosphatase activity	1.24E-02
79	GO:0031625: ubiquitin protein ligase binding	1.27E-02
80	GO:0061630: ubiquitin protein ligase activity	1.34E-02
81	GO:0008134: transcription factor binding	1.34E-02
82	GO:0043130: ubiquitin binding	1.34E-02
83	GO:0043424: protein histidine kinase binding	1.43E-02
84	GO:0019706: protein-cysteine S-palmitoyltransferase activity	1.53E-02
85	GO:0003756: protein disulfide isomerase activity	1.85E-02
86	GO:0004842: ubiquitin-protein transferase activity	1.88E-02
87	GO:0005249: voltage-gated potassium channel activity	2.07E-02
88	GO:0009055: electron carrier activity	2.25E-02
89	GO:0005355: glucose transmembrane transporter activity	2.29E-02
90	GO:0010181: FMN binding	2.29E-02
91	GO:0016853: isomerase activity	2.29E-02
92	GO:0004872: receptor activity	2.41E-02
93	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.64E-02
94	GO:0005509: calcium ion binding	3.01E-02
95	GO:0008483: transaminase activity	3.03E-02
96	GO:0008237: metallopeptidase activity	3.03E-02
97	GO:0043565: sequence-specific DNA binding	3.13E-02
98	GO:0016597: amino acid binding	3.16E-02
99	GO:0016413: O-acetyltransferase activity	3.16E-02
100	GO:0051213: dioxygenase activity	3.29E-02
101	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.56E-02
102	GO:0004806: triglyceride lipase activity	3.70E-02
103	GO:0030247: polysaccharide binding	3.70E-02
104	GO:0004683: calmodulin-dependent protein kinase activity	3.70E-02
105	GO:0003824: catalytic activity	3.87E-02
106	GO:0005096: GTPase activator activity	4.12E-02
107	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	4.41E-02
108	GO:0030145: manganese ion binding	4.41E-02
109	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.70E-02

Rank	GO Term	Adjusted P value
1	GO:0005942: phosphatidylinositol 3-kinase complex	0.00E+00
2	GO:0005886: plasma membrane	1.92E-05
3	GO:0005789: endoplasmic reticulum membrane	2.16E-04
4	GO:0016021: integral component of membrane	2.22E-04
5	GO:0000138: Golgi trans cisterna	2.55E-04
6	GO:0005777: peroxisome	2.62E-04
7	GO:0005783: endoplasmic reticulum	2.79E-04
8	GO:0005778: peroxisomal membrane	4.00E-04
9	GO:0008540: proteasome regulatory particle, base subcomplex	4.21E-04
10	GO:0005829: cytosol	4.94E-04
11	GO:0031314: extrinsic component of mitochondrial inner membrane	5.64E-04
12	GO:0005794: Golgi apparatus	5.82E-04
13	GO:0042406: extrinsic component of endoplasmic reticulum membrane	9.15E-04
14	GO:0031902: late endosome membrane	1.09E-03
15	GO:0008076: voltage-gated potassium channel complex	1.31E-03
16	GO:0031461: cullin-RING ubiquitin ligase complex	1.31E-03
17	GO:0005741: mitochondrial outer membrane	1.37E-03
18	GO:0000502: proteasome complex	1.75E-03
19	GO:0000164: protein phosphatase type 1 complex	2.23E-03
20	GO:0030140: trans-Golgi network transport vesicle	2.75E-03
21	GO:0031597: cytosolic proteasome complex	3.30E-03
22	GO:0030173: integral component of Golgi membrane	3.30E-03
23	GO:0000794: condensed nuclear chromosome	3.89E-03
24	GO:0031595: nuclear proteasome complex	3.89E-03
25	GO:0031305: integral component of mitochondrial inner membrane	4.52E-03
26	GO:0012507: ER to Golgi transport vesicle membrane	4.52E-03
27	GO:0030131: clathrin adaptor complex	4.52E-03
28	GO:0000151: ubiquitin ligase complex	5.18E-03
29	GO:0030125: clathrin vesicle coat	7.33E-03
30	GO:0016020: membrane	8.81E-03
31	GO:0016602: CCAAT-binding factor complex	9.75E-03
32	GO:0030176: integral component of endoplasmic reticulum membrane	1.15E-02
33	GO:0005769: early endosome	1.24E-02
34	GO:0005773: vacuole	1.42E-02
35	GO:0005905: clathrin-coated pit	1.53E-02
36	GO:0031410: cytoplasmic vesicle	1.64E-02
37	GO:0005770: late endosome	2.18E-02
38	GO:0005802: trans-Golgi network	2.40E-02
39	GO:0005737: cytoplasm	3.05E-02
40	GO:0005788: endoplasmic reticulum lumen	3.42E-02
41	GO:0000325: plant-type vacuole	4.41E-02
42	GO:0000786: nucleosome	4.55E-02