co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02170

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045176: apical protein localization	0.00E+00
2	GO:0009773: photosynthetic electron transport in photosystem I	1.45E-07
3	GO:0032544: plastid translation	1.03E-05
4	GO:0071588: hydrogen peroxide mediated signaling pathway	2.88E-05
5	GO:0006518: peptide metabolic process	1.27E-04
6	GO:0031048: chromatin silencing by small RNA	1.89E-04
7	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.89E-04
8	GO:0019048: modulation by virus of host morphology or physiology	1.89E-04
9	GO:0051567: histone H3-K9 methylation	2.57E-04
10	GO:0045727: positive regulation of translation	2.57E-04
11	GO:0015994: chlorophyll metabolic process	2.57E-04
12	GO:0080110: sporopollenin biosynthetic process	3.30E-04
13	GO:0006461: protein complex assembly	3.30E-04
14	GO:0010190: cytochrome b6f complex assembly	4.06E-04
15	GO:0016458: gene silencing	4.06E-04
16	GO:0048827: phyllome development	4.06E-04
17	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.06E-04
18	GO:0016554: cytidine to uridine editing	4.06E-04
19	GO:0030488: tRNA methylation	4.86E-04
20	GO:0010019: chloroplast-nucleus signaling pathway	4.86E-04
21	GO:0009657: plastid organization	7.44E-04
22	GO:0090305: nucleic acid phosphodiester bond hydrolysis	8.35E-04
23	GO:0009735: response to cytokinin	9.24E-04
24	GO:1900865: chloroplast RNA modification	9.29E-04
25	GO:0030422: production of siRNA involved in RNA interference	1.03E-03
26	GO:0006415: translational termination	1.13E-03
27	GO:0042744: hydrogen peroxide catabolic process	1.27E-03
28	GO:0010229: inflorescence development	1.34E-03
29	GO:0010540: basipetal auxin transport	1.45E-03
30	GO:0010025: wax biosynthetic process	1.67E-03
31	GO:0009695: jasmonic acid biosynthetic process	1.92E-03
32	GO:0009768: photosynthesis, light harvesting in photosystem I	1.92E-03
33	GO:0031408: oxylipin biosynthetic process	2.04E-03
34	GO:0006306: DNA methylation	2.04E-03
35	GO:0030245: cellulose catabolic process	2.17E-03
36	GO:0010584: pollen exine formation	2.43E-03
37	GO:0006342: chromatin silencing	2.84E-03
38	GO:0048825: cotyledon development	3.13E-03
39	GO:0000302: response to reactive oxygen species	3.28E-03
40	GO:0071554: cell wall organization or biogenesis	3.28E-03
41	GO:0015979: photosynthesis	3.29E-03
42	GO:0006869: lipid transport	3.78E-03
43	GO:0051607: defense response to virus	4.05E-03
44	GO:0009911: positive regulation of flower development	4.21E-03
45	GO:0010027: thylakoid membrane organization	4.21E-03
46	GO:0009816: defense response to bacterium, incompatible interaction	4.37E-03
47	GO:0018298: protein-chromophore linkage	5.05E-03
48	GO:0009407: toxin catabolic process	5.40E-03
49	GO:0010218: response to far red light	5.40E-03
50	GO:0009631: cold acclimation	5.58E-03
51	GO:0009637: response to blue light	5.94E-03
52	GO:0034599: cellular response to oxidative stress	6.13E-03
53	GO:0010114: response to red light	7.08E-03
54	GO:0009416: response to light stimulus	7.51E-03
55	GO:0009636: response to toxic substance	7.68E-03
56	GO:0006855: drug transmembrane transport	7.88E-03
57	GO:0009809: lignin biosynthetic process	8.71E-03
58	GO:0006364: rRNA processing	8.71E-03
59	GO:0006417: regulation of translation	9.36E-03
60	GO:0071555: cell wall organization	1.53E-02
61	GO:0040008: regulation of growth	1.59E-02
62	GO:0006810: transport	2.24E-02
63	GO:0009658: chloroplast organization	2.24E-02
64	GO:0016042: lipid catabolic process	3.38E-02
65	GO:0006629: lipid metabolic process	3.45E-02
66	GO:0006508: proteolysis	4.67E-02
67	GO:0009908: flower development	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
2	GO:0004321: fatty-acyl-CoA synthase activity	2.88E-05
3	GO:0047746: chlorophyllase activity	7.28E-05
4	GO:0050662: coenzyme binding	1.33E-04
5	GO:0035197: siRNA binding	1.89E-04
6	GO:0016149: translation release factor activity, codon specific	1.89E-04
7	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.57E-04
8	GO:0004222: metalloendopeptidase activity	3.31E-04
9	GO:0016688: L-ascorbate peroxidase activity	4.06E-04
10	GO:0004130: cytochrome-c peroxidase activity	4.06E-04
11	GO:0004871: signal transducer activity	4.13E-04
12	GO:0004033: aldo-keto reductase (NADP) activity	6.55E-04
13	GO:0052747: sinapyl alcohol dehydrogenase activity	6.55E-04
14	GO:0003747: translation release factor activity	8.35E-04
15	GO:0016207: 4-coumarate-CoA ligase activity	8.35E-04
16	GO:0047372: acylglycerol lipase activity	1.13E-03
17	GO:0045551: cinnamyl-alcohol dehydrogenase activity	1.23E-03
18	GO:0004521: endoribonuclease activity	1.23E-03
19	GO:0004565: beta-galactosidase activity	1.34E-03
20	GO:0008266: poly(U) RNA binding	1.45E-03
21	GO:0031409: pigment binding	1.67E-03
22	GO:0051536: iron-sulfur cluster binding	1.79E-03
23	GO:0008810: cellulase activity	2.30E-03
24	GO:0003824: catalytic activity	2.80E-03
25	GO:0048038: quinone binding	3.28E-03
26	GO:0004518: nuclease activity	3.43E-03
27	GO:0016759: cellulose synthase activity	3.73E-03
28	GO:0008237: metallopeptidase activity	3.89E-03
29	GO:0016413: O-acetyltransferase activity	4.05E-03
30	GO:0016168: chlorophyll binding	4.37E-03
31	GO:0015238: drug transmembrane transporter activity	5.22E-03
32	GO:0004364: glutathione transferase activity	6.89E-03
33	GO:0016874: ligase activity	1.07E-02
34	GO:0019843: rRNA binding	1.31E-02
35	GO:0015297: antiporter activity	1.59E-02
36	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	1.95E-02
37	GO:0004601: peroxidase activity	2.24E-02
38	GO:0016788: hydrolase activity, acting on ester bonds	2.27E-02
39	GO:0003682: chromatin binding	2.33E-02
40	GO:0020037: heme binding	2.41E-02
41	GO:0052689: carboxylic ester hydrolase activity	2.80E-02
42	GO:0004519: endonuclease activity	3.66E-02
43	GO:0008289: lipid binding	4.36E-02

Rank	GO Term	Adjusted P value
1	GO:0009535: chloroplast thylakoid membrane	6.14E-09
2	GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)	5.82E-08
3	GO:0009507: chloroplast	5.33E-07
4	GO:0009534: chloroplast thylakoid	6.04E-07
5	GO:0005719: nuclear euchromatin	1.89E-04
6	GO:0048046: apoplast	5.63E-04
7	GO:0009533: chloroplast stromal thylakoid	5.68E-04
8	GO:0009941: chloroplast envelope	8.82E-04
9	GO:0015030: Cajal body	9.29E-04
10	GO:0010287: plastoglobule	1.07E-03
11	GO:0009579: thylakoid	1.28E-03
12	GO:0030095: chloroplast photosystem II	1.45E-03
13	GO:0030076: light-harvesting complex	1.56E-03
14	GO:0042651: thylakoid membrane	1.92E-03
15	GO:0005770: late endosome	2.84E-03
16	GO:0009522: photosystem I	2.99E-03
17	GO:0005618: cell wall	3.11E-03
18	GO:0009523: photosystem II	3.13E-03
19	GO:0030529: intracellular ribonucleoprotein complex	4.21E-03
20	GO:0016021: integral component of membrane	4.72E-03
21	GO:0009570: chloroplast stroma	6.68E-03
22	GO:0031977: thylakoid lumen	6.69E-03
23	GO:0005886: plasma membrane	1.05E-02
24	GO:0005654: nucleoplasm	1.28E-02
25	GO:0009543: chloroplast thylakoid lumen	1.31E-02
26	GO:0009536: plastid	1.87E-02
27	GO:0009506: plasmodesma	1.93E-02
28	GO:0046658: anchored component of plasma membrane	2.00E-02
29	GO:0031969: chloroplast membrane	2.61E-02