co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G02010

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0080052: response to histidine	0.00E+00
2	GO:0006793: phosphorus metabolic process	0.00E+00
3	GO:0051238: sequestering of metal ion	0.00E+00
4	GO:0046865: terpenoid transport	0.00E+00
5	GO:0033542: fatty acid beta-oxidation, unsaturated, even number	0.00E+00
6	GO:0006182: cGMP biosynthetic process	0.00E+00
7	GO:0006592: ornithine biosynthetic process	0.00E+00
8	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
9	GO:0010055: atrichoblast differentiation	0.00E+00
10	GO:0043048: dolichyl monophosphate biosynthetic process	0.00E+00
11	GO:0043201: response to leucine	0.00E+00
12	GO:0080053: response to phenylalanine	0.00E+00
13	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
14	GO:0009617: response to bacterium	2.51E-08
15	GO:0006468: protein phosphorylation	1.68E-07
16	GO:0010120: camalexin biosynthetic process	5.57E-07
17	GO:0071456: cellular response to hypoxia	9.38E-07
18	GO:0042742: defense response to bacterium	1.94E-06
19	GO:0006952: defense response	4.36E-06
20	GO:0002238: response to molecule of fungal origin	5.39E-06
21	GO:0009620: response to fungus	3.18E-05
22	GO:0010112: regulation of systemic acquired resistance	4.19E-05
23	GO:0009817: defense response to fungus, incompatible interaction	2.70E-04
24	GO:0006874: cellular calcium ion homeostasis	2.94E-04
25	GO:0032259: methylation	3.27E-04
26	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.43E-04
27	GO:0009751: response to salicylic acid	3.50E-04
28	GO:0032491: detection of molecule of fungal origin	4.51E-04
29	GO:0042759: long-chain fatty acid biosynthetic process	4.51E-04
30	GO:0032107: regulation of response to nutrient levels	4.51E-04
31	GO:0051938: L-glutamate import	4.51E-04
32	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	4.51E-04
33	GO:0010726: positive regulation of hydrogen peroxide metabolic process	4.51E-04
34	GO:0010421: hydrogen peroxide-mediated programmed cell death	4.51E-04
35	GO:1901183: positive regulation of camalexin biosynthetic process	4.51E-04
36	GO:0009700: indole phytoalexin biosynthetic process	4.51E-04
37	GO:0030091: protein repair	5.51E-04
38	GO:0010204: defense response signaling pathway, resistance gene-independent	6.72E-04
39	GO:0010200: response to chitin	6.84E-04
40	GO:0009636: response to toxic substance	7.09E-04
41	GO:0044419: interspecies interaction between organisms	9.73E-04
42	GO:0042939: tripeptide transport	9.73E-04
43	GO:0006423: cysteinyl-tRNA aminoacylation	9.73E-04
44	GO:0030003: cellular cation homeostasis	9.73E-04
45	GO:0019441: tryptophan catabolic process to kynurenine	9.73E-04
46	GO:0043091: L-arginine import	9.73E-04
47	GO:0051592: response to calcium ion	9.73E-04
48	GO:0080183: response to photooxidative stress	9.73E-04
49	GO:0015802: basic amino acid transport	9.73E-04
50	GO:0009805: coumarin biosynthetic process	9.73E-04
51	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	9.73E-04
52	GO:0043066: negative regulation of apoptotic process	9.73E-04
53	GO:0002240: response to molecule of oomycetes origin	9.73E-04
54	GO:0043069: negative regulation of programmed cell death	1.10E-03
55	GO:0009682: induced systemic resistance	1.27E-03
56	GO:0006790: sulfur compound metabolic process	1.45E-03
57	GO:0012501: programmed cell death	1.45E-03
58	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	1.58E-03
59	GO:0006556: S-adenosylmethionine biosynthetic process	1.58E-03
60	GO:0010351: lithium ion transport	1.58E-03
61	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	1.58E-03
62	GO:0015692: lead ion transport	1.58E-03
63	GO:0080168: abscisic acid transport	1.58E-03
64	GO:0034051: negative regulation of plant-type hypersensitive response	1.58E-03
65	GO:0002237: response to molecule of bacterial origin	1.86E-03
66	GO:0050832: defense response to fungus	1.92E-03
67	GO:0070588: calcium ion transmembrane transport	2.09E-03
68	GO:0046854: phosphatidylinositol phosphorylation	2.09E-03
69	GO:0009407: toxin catabolic process	2.11E-03
70	GO:0006882: cellular zinc ion homeostasis	2.29E-03
71	GO:0046513: ceramide biosynthetic process	2.29E-03
72	GO:0010116: positive regulation of abscisic acid biosynthetic process	2.29E-03
73	GO:0019438: aromatic compound biosynthetic process	2.29E-03
74	GO:0033169: histone H3-K9 demethylation	2.29E-03
75	GO:0080142: regulation of salicylic acid biosynthetic process	3.08E-03
76	GO:0042938: dipeptide transport	3.08E-03
77	GO:0045227: capsule polysaccharide biosynthetic process	3.08E-03
78	GO:0010483: pollen tube reception	3.08E-03
79	GO:0045088: regulation of innate immune response	3.08E-03
80	GO:0006536: glutamate metabolic process	3.08E-03
81	GO:0033358: UDP-L-arabinose biosynthetic process	3.08E-03
82	GO:0003333: amino acid transmembrane transport	3.14E-03
83	GO:0016998: cell wall macromolecule catabolic process	3.14E-03
84	GO:0006631: fatty acid metabolic process	3.14E-03
85	GO:0042542: response to hydrogen peroxide	3.31E-03
86	GO:0051707: response to other organism	3.49E-03
87	GO:0010150: leaf senescence	3.68E-03
88	GO:0006012: galactose metabolic process	3.75E-03
89	GO:0030308: negative regulation of cell growth	3.95E-03
90	GO:0000304: response to singlet oxygen	3.95E-03
91	GO:0009697: salicylic acid biosynthetic process	3.95E-03
92	GO:0034052: positive regulation of plant-type hypersensitive response	3.95E-03
93	GO:0030041: actin filament polymerization	3.95E-03
94	GO:0042538: hyperosmotic salinity response	4.67E-03
95	GO:0007165: signal transduction	4.67E-03
96	GO:0042391: regulation of membrane potential	4.78E-03
97	GO:0006561: proline biosynthetic process	4.89E-03
98	GO:0010942: positive regulation of cell death	4.89E-03
99	GO:0015691: cadmium ion transport	4.89E-03
100	GO:0010256: endomembrane system organization	4.89E-03
101	GO:0006555: methionine metabolic process	4.89E-03
102	GO:0010555: response to mannitol	5.90E-03
103	GO:2000067: regulation of root morphogenesis	5.90E-03
104	GO:0019509: L-methionine salvage from methylthioadenosine	5.90E-03
105	GO:0002229: defense response to oomycetes	6.37E-03
106	GO:0006891: intra-Golgi vesicle-mediated transport	6.37E-03
107	GO:0010193: response to ozone	6.37E-03
108	GO:0050829: defense response to Gram-negative bacterium	6.98E-03
109	GO:1902074: response to salt	6.98E-03
110	GO:1900056: negative regulation of leaf senescence	6.98E-03
111	GO:0019745: pentacyclic triterpenoid biosynthetic process	6.98E-03
112	GO:0030026: cellular manganese ion homeostasis	6.98E-03
113	GO:1900057: positive regulation of leaf senescence	6.98E-03
114	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	6.98E-03
115	GO:0010252: auxin homeostasis	7.73E-03
116	GO:0009850: auxin metabolic process	8.12E-03
117	GO:0043068: positive regulation of programmed cell death	8.12E-03
118	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	8.12E-03
119	GO:0010497: plasmodesmata-mediated intercellular transport	9.33E-03
120	GO:0006526: arginine biosynthetic process	9.33E-03
121	GO:0009808: lignin metabolic process	9.33E-03
122	GO:0009699: phenylpropanoid biosynthetic process	9.33E-03
123	GO:0007186: G-protein coupled receptor signaling pathway	9.33E-03
124	GO:0009816: defense response to bacterium, incompatible interaction	9.78E-03
125	GO:0009627: systemic acquired resistance	1.03E-02
126	GO:0009056: catabolic process	1.06E-02
127	GO:0007338: single fertilization	1.06E-02
128	GO:0009821: alkaloid biosynthetic process	1.06E-02
129	GO:0051865: protein autoubiquitination	1.06E-02
130	GO:0008202: steroid metabolic process	1.19E-02
131	GO:2000280: regulation of root development	1.19E-02
132	GO:0048268: clathrin coat assembly	1.19E-02
133	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	1.19E-02
134	GO:0008219: cell death	1.21E-02
135	GO:0009870: defense response signaling pathway, resistance gene-dependent	1.33E-02
136	GO:0006032: chitin catabolic process	1.33E-02
137	GO:0009688: abscisic acid biosynthetic process	1.33E-02
138	GO:0055062: phosphate ion homeostasis	1.33E-02
139	GO:0006499: N-terminal protein myristoylation	1.34E-02
140	GO:0006633: fatty acid biosynthetic process	1.43E-02
141	GO:0009750: response to fructose	1.47E-02
142	GO:0006816: calcium ion transport	1.47E-02
143	GO:0009089: lysine biosynthetic process via diaminopimelate	1.47E-02
144	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	1.62E-02
145	GO:0000266: mitochondrial fission	1.62E-02
146	GO:0002213: defense response to insect	1.62E-02
147	GO:0055114: oxidation-reduction process	1.64E-02
148	GO:0006979: response to oxidative stress	1.73E-02
149	GO:0006626: protein targeting to mitochondrion	1.78E-02
150	GO:0055046: microgametogenesis	1.78E-02
151	GO:0009718: anthocyanin-containing compound biosynthetic process	1.78E-02
152	GO:0007166: cell surface receptor signaling pathway	1.91E-02
153	GO:0010143: cutin biosynthetic process	1.94E-02
154	GO:0009753: response to jasmonic acid	1.99E-02
155	GO:0010053: root epidermal cell differentiation	2.10E-02
156	GO:0009969: xyloglucan biosynthetic process	2.10E-02
157	GO:0009225: nucleotide-sugar metabolic process	2.10E-02
158	GO:0000162: tryptophan biosynthetic process	2.27E-02
159	GO:0010025: wax biosynthetic process	2.27E-02
160	GO:0006855: drug transmembrane transport	2.32E-02
161	GO:0005992: trehalose biosynthetic process	2.44E-02
162	GO:0080147: root hair cell development	2.44E-02
163	GO:0006812: cation transport	2.50E-02
164	GO:0009846: pollen germination	2.50E-02
165	GO:0009695: jasmonic acid biosynthetic process	2.62E-02
166	GO:0006486: protein glycosylation	2.68E-02
167	GO:0009809: lignin biosynthetic process	2.68E-02
168	GO:0031408: oxylipin biosynthetic process	2.81E-02
169	GO:0030433: ubiquitin-dependent ERAD pathway	2.99E-02
170	GO:0006730: one-carbon metabolic process	2.99E-02
171	GO:0019748: secondary metabolic process	2.99E-02
172	GO:0009737: response to abscisic acid	2.99E-02
173	GO:0009625: response to insect	3.18E-02
174	GO:0010227: floral organ abscission	3.18E-02
175	GO:0009693: ethylene biosynthetic process	3.18E-02
176	GO:0009626: plant-type hypersensitive response	3.37E-02
177	GO:0009561: megagametogenesis	3.38E-02
178	GO:0010584: pollen exine formation	3.38E-02
179	GO:0042147: retrograde transport, endosome to Golgi	3.58E-02
180	GO:0042631: cellular response to water deprivation	3.78E-02
181	GO:0006885: regulation of pH	3.99E-02
182	GO:0048544: recognition of pollen	4.20E-02
183	GO:0006814: sodium ion transport	4.20E-02
184	GO:0042752: regulation of circadian rhythm	4.20E-02
185	GO:0009611: response to wounding	4.29E-02
186	GO:0008654: phospholipid biosynthetic process	4.41E-02
187	GO:0009851: auxin biosynthetic process	4.41E-02
188	GO:0006623: protein targeting to vacuole	4.41E-02
189	GO:0009749: response to glucose	4.41E-02
190	GO:0016032: viral process	4.85E-02

Rank	GO Term	Adjusted P value
1	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
2	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
3	GO:0008777: acetylornithine deacetylase activity	0.00E+00
4	GO:0004168: dolichol kinase activity	0.00E+00
5	GO:0051670: inulinase activity	0.00E+00
6	GO:0047720: indoleacetaldoxime dehydratase activity	0.00E+00
7	GO:0016301: kinase activity	4.52E-08
8	GO:0004674: protein serine/threonine kinase activity	8.62E-08
9	GO:0005524: ATP binding	2.06E-06
10	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.29E-06
11	GO:0102391: decanoate--CoA ligase activity	9.21E-06
12	GO:0004467: long-chain fatty acid-CoA ligase activity	1.46E-05
13	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	3.09E-05
14	GO:0008171: O-methyltransferase activity	7.12E-05
15	GO:0050660: flavin adenine dinucleotide binding	1.14E-04
16	GO:0010279: indole-3-acetic acid amido synthetase activity	1.17E-04
17	GO:0005516: calmodulin binding	3.15E-04
18	GO:0033743: peptide-methionine (R)-S-oxide reductase activity	3.43E-04
19	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	3.43E-04
20	GO:0009055: electron carrier activity	4.26E-04
21	GO:0031219: levanase activity	4.51E-04
22	GO:0031957: very long-chain fatty acid-CoA ligase activity	4.51E-04
23	GO:0010285: L,L-diaminopimelate aminotransferase activity	4.51E-04
24	GO:0031127: alpha-(1,2)-fucosyltransferase activity	4.51E-04
25	GO:0004425: indole-3-glycerol-phosphate synthase activity	4.51E-04
26	GO:0051669: fructan beta-fructosidase activity	4.51E-04
27	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	4.51E-04
28	GO:0004321: fatty-acyl-CoA synthase activity	4.51E-04
29	GO:0050736: O-malonyltransferase activity	9.73E-04
30	GO:0042937: tripeptide transporter activity	9.73E-04
31	GO:0032454: histone demethylase activity (H3-K9 specific)	9.73E-04
32	GO:0004103: choline kinase activity	9.73E-04
33	GO:0004566: beta-glucuronidase activity	9.73E-04
34	GO:0050291: sphingosine N-acyltransferase activity	9.73E-04
35	GO:0010297: heteropolysaccharide binding	9.73E-04
36	GO:0004817: cysteine-tRNA ligase activity	9.73E-04
37	GO:0032934: sterol binding	9.73E-04
38	GO:0004061: arylformamidase activity	9.73E-04
39	GO:0031683: G-protein beta/gamma-subunit complex binding	1.58E-03
40	GO:0004383: guanylate cyclase activity	1.58E-03
41	GO:0016595: glutamate binding	1.58E-03
42	GO:0004478: methionine adenosyltransferase activity	1.58E-03
43	GO:0001664: G-protein coupled receptor binding	1.58E-03
44	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	1.58E-03
45	GO:0042409: caffeoyl-CoA O-methyltransferase activity	1.58E-03
46	GO:0005262: calcium channel activity	1.65E-03
47	GO:0005388: calcium-transporting ATPase activity	1.65E-03
48	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.75E-03
49	GO:0004970: ionotropic glutamate receptor activity	2.09E-03
50	GO:0005217: intracellular ligand-gated ion channel activity	2.09E-03
51	GO:0030552: cAMP binding	2.09E-03
52	GO:0030553: cGMP binding	2.09E-03
53	GO:0030145: manganese ion binding	2.24E-03
54	GO:0015181: arginine transmembrane transporter activity	2.29E-03
55	GO:0010178: IAA-amino acid conjugate hydrolase activity	2.29E-03
56	GO:0042299: lupeol synthase activity	2.29E-03
57	GO:0004351: glutamate decarboxylase activity	2.29E-03
58	GO:0015189: L-lysine transmembrane transporter activity	2.29E-03
59	GO:0030246: carbohydrate binding	2.50E-03
60	GO:0005216: ion channel activity	2.85E-03
61	GO:0016866: intramolecular transferase activity	3.08E-03
62	GO:0015368: calcium:cation antiporter activity	3.08E-03
63	GO:0050373: UDP-arabinose 4-epimerase activity	3.08E-03
64	GO:0042936: dipeptide transporter activity	3.08E-03
65	GO:0015369: calcium:proton antiporter activity	3.08E-03
66	GO:0005313: L-glutamate transmembrane transporter activity	3.08E-03
67	GO:0004031: aldehyde oxidase activity	3.08E-03
68	GO:0050302: indole-3-acetaldehyde oxidase activity	3.08E-03
69	GO:0004364: glutathione transferase activity	3.31E-03
70	GO:0004040: amidase activity	3.95E-03
71	GO:0005496: steroid binding	3.95E-03
72	GO:0005249: voltage-gated potassium channel activity	4.78E-03
73	GO:0030551: cyclic nucleotide binding	4.78E-03
74	GO:0004605: phosphatidate cytidylyltransferase activity	4.89E-03
75	GO:0047714: galactolipase activity	4.89E-03
76	GO:0004602: glutathione peroxidase activity	5.90E-03
77	GO:0005261: cation channel activity	5.90E-03
78	GO:0004656: procollagen-proline 4-dioxygenase activity	5.90E-03
79	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	5.90E-03
80	GO:0003978: UDP-glucose 4-epimerase activity	5.90E-03
81	GO:0008113: peptide-methionine (S)-S-oxide reductase activity	5.90E-03
82	GO:0045735: nutrient reservoir activity	6.33E-03
83	GO:0008168: methyltransferase activity	6.77E-03
84	GO:0005085: guanyl-nucleotide exchange factor activity	6.98E-03
85	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	6.98E-03
86	GO:0004033: aldo-keto reductase (NADP) activity	8.12E-03
87	GO:0015491: cation:cation antiporter activity	8.12E-03
88	GO:0004564: beta-fructofuranosidase activity	8.12E-03
89	GO:0004034: aldose 1-epimerase activity	8.12E-03
90	GO:0008237: metallopeptidase activity	8.22E-03
91	GO:0008142: oxysterol binding	9.33E-03
92	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	9.33E-03
93	GO:0008417: fucosyltransferase activity	1.06E-02
94	GO:0016207: 4-coumarate-CoA ligase activity	1.06E-02
95	GO:0030247: polysaccharide binding	1.09E-02
96	GO:0052689: carboxylic ester hydrolase activity	1.16E-02
97	GO:0031490: chromatin DNA binding	1.19E-02
98	GO:0016844: strictosidine synthase activity	1.19E-02
99	GO:0004575: sucrose alpha-glucosidase activity	1.19E-02
100	GO:0015174: basic amino acid transmembrane transporter activity	1.19E-02
101	GO:0004568: chitinase activity	1.33E-02
102	GO:0005545: 1-phosphatidylinositol binding	1.33E-02
103	GO:0004713: protein tyrosine kinase activity	1.33E-02
104	GO:0008559: xenobiotic-transporting ATPase activity	1.47E-02
105	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.54E-02
106	GO:0000976: transcription regulatory region sequence-specific DNA binding	1.62E-02
107	GO:0004022: alcohol dehydrogenase (NAD) activity	1.78E-02
108	GO:0003924: GTPase activity	1.79E-02
109	GO:0046872: metal ion binding	1.86E-02
110	GO:0004190: aspartic-type endopeptidase activity	2.10E-02
111	GO:0004867: serine-type endopeptidase inhibitor activity	2.10E-02
112	GO:0051537: 2 iron, 2 sulfur cluster binding	2.15E-02
113	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.18E-02
114	GO:0001046: core promoter sequence-specific DNA binding	2.44E-02
115	GO:0031418: L-ascorbic acid binding	2.44E-02
116	GO:0004707: MAP kinase activity	2.81E-02
117	GO:0015171: amino acid transmembrane transporter activity	2.97E-02
118	GO:0005525: GTP binding	3.21E-02
119	GO:0004499: N,N-dimethylaniline monooxygenase activity	3.38E-02
120	GO:0004672: protein kinase activity	3.50E-02
121	GO:0005451: monovalent cation:proton antiporter activity	3.78E-02
122	GO:0015035: protein disulfide oxidoreductase activity	3.92E-02
123	GO:0005509: calcium ion binding	3.95E-02
124	GO:0005199: structural constituent of cell wall	3.99E-02
125	GO:0030276: clathrin binding	3.99E-02
126	GO:0008080: N-acetyltransferase activity	3.99E-02
127	GO:0016853: isomerase activity	4.20E-02
128	GO:0015299: solute:proton antiporter activity	4.20E-02
129	GO:0005506: iron ion binding	4.39E-02
130	GO:0004871: signal transducer activity	4.82E-02
131	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	5.00E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.57E-09
2	GO:0005886: plasma membrane	5.38E-08
3	GO:0005783: endoplasmic reticulum	1.94E-05
4	GO:0005911: cell-cell junction	4.51E-04
5	GO:0005765: lysosomal membrane	1.27E-03
6	GO:0009530: primary cell wall	1.58E-03
7	GO:0005576: extracellular region	2.10E-03
8	GO:0030660: Golgi-associated vesicle membrane	3.08E-03
9	GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane	3.08E-03
10	GO:0032588: trans-Golgi network membrane	4.89E-03
11	GO:0005770: late endosome	5.15E-03
12	GO:0032580: Golgi cisterna membrane	7.73E-03
13	GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane	8.12E-03
14	GO:0005829: cytosol	9.78E-03
15	GO:0031090: organelle membrane	1.06E-02
16	GO:0000325: plant-type vacuole	1.40E-02
17	GO:0005795: Golgi stack	2.10E-02
18	GO:0030176: integral component of endoplasmic reticulum membrane	2.10E-02
19	GO:0005618: cell wall	2.29E-02
20	GO:0005905: clathrin-coated pit	2.81E-02
21	GO:0005887: integral component of plasma membrane	2.82E-02
22	GO:0030136: clathrin-coated vesicle	3.58E-02
23	GO:0048046: apoplast	4.07E-02
24	GO:0005794: Golgi apparatus	4.57E-02
25	GO:0000785: chromatin	4.85E-02