co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT2G01950

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006223: uracil salvage	0.00E+00
2	GO:0010394: homogalacturonan metabolic process	0.00E+00
3	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
4	GO:0006642: triglyceride mobilization	0.00E+00
5	GO:0007017: microtubule-based process	8.89E-07
6	GO:0046166: glyceraldehyde-3-phosphate biosynthetic process	3.25E-05
7	GO:0045488: pectin metabolic process	3.25E-05
8	GO:0071258: cellular response to gravity	8.18E-05
9	GO:0019563: glycerol catabolic process	1.42E-04
10	GO:0010253: UDP-rhamnose biosynthetic process	1.42E-04
11	GO:0032504: multicellular organism reproduction	1.42E-04
12	GO:0045489: pectin biosynthetic process	1.45E-04
13	GO:0016132: brassinosteroid biosynthetic process	1.82E-04
14	GO:0010088: phloem development	2.11E-04
15	GO:0006241: CTP biosynthetic process	2.11E-04
16	GO:0019048: modulation by virus of host morphology or physiology	2.11E-04
17	GO:0006165: nucleoside diphosphate phosphorylation	2.11E-04
18	GO:0006228: UTP biosynthetic process	2.11E-04
19	GO:0031048: chromatin silencing by small RNA	2.11E-04
20	GO:0044206: UMP salvage	2.85E-04
21	GO:0009956: radial pattern formation	2.85E-04
22	GO:0006183: GTP biosynthetic process	2.85E-04
23	GO:0051567: histone H3-K9 methylation	2.85E-04
24	GO:0043097: pyrimidine nucleoside salvage	3.65E-04
25	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	3.93E-04
26	GO:0016458: gene silencing	4.48E-04
27	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	4.48E-04
28	GO:0006555: methionine metabolic process	4.48E-04
29	GO:0010358: leaf shaping	4.48E-04
30	GO:0006206: pyrimidine nucleobase metabolic process	4.48E-04
31	GO:0006694: steroid biosynthetic process	5.36E-04
32	GO:0006955: immune response	6.27E-04
33	GO:0009808: lignin metabolic process	8.20E-04
34	GO:0009657: plastid organization	8.20E-04
35	GO:0042761: very long-chain fatty acid biosynthetic process	1.02E-03
36	GO:0035999: tetrahydrofolate interconversion	1.02E-03
37	GO:0030422: production of siRNA involved in RNA interference	1.13E-03
38	GO:0010192: mucilage biosynthetic process	1.13E-03
39	GO:0010015: root morphogenesis	1.24E-03
40	GO:0006094: gluconeogenesis	1.47E-03
41	GO:0019253: reductive pentose-phosphate cycle	1.60E-03
42	GO:0009933: meristem structural organization	1.60E-03
43	GO:0006633: fatty acid biosynthetic process	1.62E-03
44	GO:0010025: wax biosynthetic process	1.85E-03
45	GO:0009116: nucleoside metabolic process	1.99E-03
46	GO:0006418: tRNA aminoacylation for protein translation	2.12E-03
47	GO:0016998: cell wall macromolecule catabolic process	2.26E-03
48	GO:0006306: DNA methylation	2.26E-03
49	GO:0006730: one-carbon metabolic process	2.40E-03
50	GO:0009411: response to UV	2.55E-03
51	GO:0040007: growth	2.55E-03
52	GO:0009826: unidimensional cell growth	2.62E-03
53	GO:0010214: seed coat development	2.69E-03
54	GO:0000271: polysaccharide biosynthetic process	3.00E-03
55	GO:0080022: primary root development	3.00E-03
56	GO:0071555: cell wall organization	3.02E-03
57	GO:0010305: leaf vascular tissue pattern formation	3.15E-03
58	GO:0006342: chromatin silencing	3.15E-03
59	GO:0009741: response to brassinosteroid	3.15E-03
60	GO:0010268: brassinosteroid homeostasis	3.15E-03
61	GO:0007018: microtubule-based movement	3.31E-03
62	GO:0032502: developmental process	3.80E-03
63	GO:0016125: sterol metabolic process	4.14E-03
64	GO:0051607: defense response to virus	4.49E-03
65	GO:0009816: defense response to bacterium, incompatible interaction	4.85E-03
66	GO:0015995: chlorophyll biosynthetic process	5.22E-03
67	GO:0048481: plant ovule development	5.60E-03
68	GO:0009834: plant-type secondary cell wall biogenesis	5.99E-03
69	GO:0007568: aging	6.19E-03
70	GO:0009867: jasmonic acid mediated signaling pathway	6.60E-03
71	GO:0016051: carbohydrate biosynthetic process	6.60E-03
72	GO:0042542: response to hydrogen peroxide	7.65E-03
73	GO:0008283: cell proliferation	7.87E-03
74	GO:0009585: red, far-red light phototransduction	9.69E-03
75	GO:0055114: oxidation-reduction process	1.01E-02
76	GO:0006417: regulation of translation	1.04E-02
77	GO:0006096: glycolytic process	1.09E-02
78	GO:0016036: cellular response to phosphate starvation	1.74E-02
79	GO:0015031: protein transport	2.26E-02
80	GO:0009658: chloroplast organization	2.50E-02
81	GO:0046686: response to cadmium ion	2.77E-02
82	GO:0048366: leaf development	2.80E-02
83	GO:0006468: protein phosphorylation	3.99E-02
84	GO:0009753: response to jasmonic acid	4.04E-02
85	GO:0008152: metabolic process	4.12E-02
86	GO:0009734: auxin-activated signaling pathway	4.90E-02

Rank	GO Term	Adjusted P value
1	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
2	GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity	0.00E+00
3	GO:0050614: delta24-sterol reductase activity	0.00E+00
4	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
5	GO:0016631: enoyl-[acyl-carrier-protein] reductase activity	0.00E+00
6	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
7	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
8	GO:0005200: structural constituent of cytoskeleton	5.90E-06
9	GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity	3.25E-05
10	GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity	3.25E-05
11	GO:0010012: steroid 22-alpha hydroxylase activity	3.25E-05
12	GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity	3.25E-05
13	GO:0004807: triose-phosphate isomerase activity	3.25E-05
14	GO:0042834: peptidoglycan binding	3.25E-05
15	GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity	8.18E-05
16	GO:0008460: dTDP-glucose 4,6-dehydratase activity	8.18E-05
17	GO:0010280: UDP-L-rhamnose synthase activity	8.18E-05
18	GO:0050377: UDP-glucose 4,6-dehydratase activity	8.18E-05
19	GO:0030267: glyoxylate reductase (NADP) activity	1.42E-04
20	GO:0002161: aminoacyl-tRNA editing activity	1.42E-04
21	GO:0004148: dihydrolipoyl dehydrogenase activity	1.42E-04
22	GO:0035197: siRNA binding	2.11E-04
23	GO:0004550: nucleoside diphosphate kinase activity	2.11E-04
24	GO:0004845: uracil phosphoribosyltransferase activity	2.85E-04
25	GO:0016836: hydro-lyase activity	2.85E-04
26	GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed	2.85E-04
27	GO:0004849: uridine kinase activity	5.36E-04
28	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	5.36E-04
29	GO:0043621: protein self-association	6.09E-04
30	GO:0102425: myricetin 3-O-glucosyltransferase activity	6.27E-04
31	GO:0102360: daphnetin 3-O-glucosyltransferase activity	6.27E-04
32	GO:0047893: flavonol 3-O-glucosyltransferase activity	7.22E-04
33	GO:0000049: tRNA binding	1.36E-03
34	GO:0004521: endoribonuclease activity	1.36E-03
35	GO:0004565: beta-galactosidase activity	1.47E-03
36	GO:0008083: growth factor activity	1.60E-03
37	GO:0019706: protein-cysteine S-palmitoyltransferase activity	2.26E-03
38	GO:0005525: GTP binding	2.32E-03
39	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.40E-03
40	GO:0004812: aminoacyl-tRNA ligase activity	2.84E-03
41	GO:0016722: oxidoreductase activity, oxidizing metal ions	4.32E-03
42	GO:0004672: protein kinase activity	4.91E-03
43	GO:0003924: GTPase activity	4.94E-03
44	GO:0003729: mRNA binding	5.00E-03
45	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	6.19E-03
46	GO:0003777: microtubule motor activity	1.04E-02
47	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	1.11E-02
48	GO:0080043: quercetin 3-O-glucosyltransferase activity	1.17E-02
49	GO:0080044: quercetin 7-O-glucosyltransferase activity	1.17E-02
50	GO:0030599: pectinesterase activity	1.19E-02
51	GO:0016758: transferase activity, transferring hexosyl groups	1.43E-02
52	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.48E-02
53	GO:0008017: microtubule binding	1.89E-02
54	GO:0003824: catalytic activity	1.95E-02
55	GO:0008194: UDP-glycosyltransferase activity	1.98E-02
56	GO:0004674: protein serine/threonine kinase activity	2.28E-02
57	GO:0003682: chromatin binding	2.60E-02
58	GO:0050660: flavin adenine dinucleotide binding	2.77E-02
59	GO:0042803: protein homodimerization activity	3.42E-02
60	GO:0016301: kinase activity	3.44E-02

Rank	GO Term	Adjusted P value
1	GO:0005835: fatty acid synthase complex	0.00E+00
2	GO:0045298: tubulin complex	7.70E-08
3	GO:0009570: chloroplast stroma	1.23E-06
4	GO:0005618: cell wall	2.20E-05
5	GO:0005719: nuclear euchromatin	2.11E-04
6	GO:0009579: thylakoid	2.14E-04
7	GO:0009941: chloroplast envelope	2.42E-04
8	GO:0009505: plant-type cell wall	6.97E-04
9	GO:0015030: Cajal body	1.02E-03
10	GO:0009507: chloroplast	1.06E-03
11	GO:0030659: cytoplasmic vesicle membrane	1.60E-03
12	GO:0005871: kinesin complex	2.84E-03
13	GO:0005874: microtubule	3.25E-03
14	GO:0000139: Golgi membrane	4.43E-03
15	GO:0030529: intracellular ribonucleoprotein complex	4.67E-03
16	GO:0005773: vacuole	6.15E-03
17	GO:0009506: plasmodesma	7.07E-03
18	GO:0005783: endoplasmic reticulum	9.31E-03
19	GO:0009534: chloroplast thylakoid	1.06E-02
20	GO:0016020: membrane	1.08E-02
21	GO:0005794: Golgi apparatus	1.20E-02
22	GO:0005829: cytosol	1.33E-02
23	GO:0005802: trans-Golgi network	1.41E-02
24	GO:0005654: nucleoplasm	1.43E-02
25	GO:0005774: vacuolar membrane	1.46E-02
26	GO:0048046: apoplast	1.55E-02
27	GO:0005768: endosome	1.60E-02
28	GO:0005576: extracellular region	1.69E-02
29	GO:0009536: plastid	2.18E-02
30	GO:0046658: anchored component of plasma membrane	2.23E-02
31	GO:0005886: plasma membrane	3.66E-02
32	GO:0043231: intracellular membrane-bounded organelle	4.12E-02