Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT2G01170

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
2GO:1903428: positive regulation of reactive oxygen species biosynthetic process0.00E+00
3GO:0010378: temperature compensation of the circadian clock0.00E+00
4GO:0009768: photosynthesis, light harvesting in photosystem I4.09E-20
5GO:0018298: protein-chromophore linkage1.21E-14
6GO:0015979: photosynthesis1.18E-11
7GO:0010218: response to far red light2.15E-10
8GO:0009645: response to low light intensity stimulus2.48E-10
9GO:0009637: response to blue light2.57E-08
10GO:0010114: response to red light5.22E-08
11GO:0009644: response to high light intensity6.48E-08
12GO:0009769: photosynthesis, light harvesting in photosystem II9.02E-08
13GO:0010600: regulation of auxin biosynthetic process3.53E-06
14GO:0009416: response to light stimulus5.41E-06
15GO:0010244: response to low fluence blue light stimulus by blue low-fluence system1.32E-05
16GO:0010928: regulation of auxin mediated signaling pathway2.41E-05
17GO:0032958: inositol phosphate biosynthetic process5.79E-05
18GO:0009585: red, far-red light phototransduction1.25E-04
19GO:0051170: nuclear import1.41E-04
20GO:0048511: rhythmic process1.87E-04
21GO:0010017: red or far-red light signaling pathway2.06E-04
22GO:1902448: positive regulation of shade avoidance2.40E-04
23GO:0006598: polyamine catabolic process2.40E-04
24GO:0006020: inositol metabolic process3.49E-04
25GO:0044211: CTP salvage3.49E-04
26GO:0007623: circadian rhythm4.24E-04
27GO:0030104: water homeostasis4.66E-04
28GO:0009765: photosynthesis, light harvesting4.66E-04
29GO:2000306: positive regulation of photomorphogenesis4.66E-04
30GO:0044206: UMP salvage4.66E-04
31GO:0009409: response to cold4.98E-04
32GO:0048578: positive regulation of long-day photoperiodism, flowering5.92E-04
33GO:0043097: pyrimidine nucleoside salvage5.92E-04
34GO:0009635: response to herbicide7.24E-04
35GO:0045962: positive regulation of development, heterochronic7.24E-04
36GO:0006206: pyrimidine nucleobase metabolic process7.24E-04
37GO:0000160: phosphorelay signal transduction system7.51E-04
38GO:0009861: jasmonic acid and ethylene-dependent systemic resistance8.63E-04
39GO:0006355: regulation of transcription, DNA-templated9.10E-04
40GO:0080167: response to karrikin9.57E-04
41GO:0051510: regulation of unidimensional cell growth1.01E-03
42GO:0010161: red light signaling pathway1.01E-03
43GO:1900056: negative regulation of leaf senescence1.01E-03
44GO:0010196: nonphotochemical quenching1.01E-03
45GO:0042542: response to hydrogen peroxide1.10E-03
46GO:0009640: photomorphogenesis1.14E-03
47GO:0009704: de-etiolation1.16E-03
48GO:0008643: carbohydrate transport1.23E-03
49GO:0010099: regulation of photomorphogenesis1.32E-03
50GO:0009827: plant-type cell wall modification1.32E-03
51GO:0090333: regulation of stomatal closure1.48E-03
52GO:0048354: mucilage biosynthetic process involved in seed coat development1.65E-03
53GO:0010380: regulation of chlorophyll biosynthetic process1.65E-03
54GO:0006351: transcription, DNA-templated1.67E-03
55GO:0055062: phosphate ion homeostasis1.83E-03
56GO:0009641: shade avoidance1.83E-03
57GO:0018107: peptidyl-threonine phosphorylation2.41E-03
58GO:0009718: anthocyanin-containing compound biosynthetic process2.41E-03
59GO:0010207: photosystem II assembly2.62E-03
60GO:0009266: response to temperature stimulus2.62E-03
61GO:0090351: seedling development2.82E-03
62GO:0009735: response to cytokinin2.85E-03
63GO:0009269: response to desiccation3.72E-03
64GO:0009693: ethylene biosynthetic process4.20E-03
65GO:0071215: cellular response to abscisic acid stimulus4.20E-03
66GO:0055085: transmembrane transport4.32E-03
67GO:0009741: response to brassinosteroid5.21E-03
68GO:0006814: sodium ion transport5.48E-03
69GO:0042752: regulation of circadian rhythm5.48E-03
70GO:0009658: chloroplast organization5.66E-03
71GO:0009791: post-embryonic development5.75E-03
72GO:0000302: response to reactive oxygen species6.02E-03
73GO:1901657: glycosyl compound metabolic process6.59E-03
74GO:0045892: negative regulation of transcription, DNA-templated8.54E-03
75GO:0048573: photoperiodism, flowering8.71E-03
76GO:0015995: chlorophyll biosynthetic process8.71E-03
77GO:0009817: defense response to fungus, incompatible interaction9.36E-03
78GO:0010119: regulation of stomatal movement1.04E-02
79GO:0009910: negative regulation of flower development1.04E-02
80GO:0006865: amino acid transport1.07E-02
81GO:0051707: response to other organism1.32E-02
82GO:0009965: leaf morphogenesis1.44E-02
83GO:0006812: cation transport1.55E-02
84GO:0009908: flower development1.67E-02
85GO:0006857: oligopeptide transport1.71E-02
86GO:0009909: regulation of flower development1.75E-02
87GO:0009611: response to wounding1.89E-02
88GO:0035556: intracellular signal transduction1.95E-02
89GO:0007165: signal transduction1.98E-02
90GO:0009737: response to abscisic acid2.03E-02
91GO:0009624: response to nematode2.10E-02
92GO:0018105: peptidyl-serine phosphorylation2.14E-02
93GO:0009742: brassinosteroid mediated signaling pathway2.19E-02
94GO:0006457: protein folding2.39E-02
95GO:0009058: biosynthetic process2.55E-02
96GO:0010228: vegetative to reproductive phase transition of meristem3.20E-02
97GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.35E-02
98GO:0010468: regulation of gene expression3.51E-02
99GO:0009651: response to salt stress3.58E-02
100GO:0030154: cell differentiation4.06E-02
101GO:0009826: unidimensional cell growth4.11E-02
102GO:0055114: oxidation-reduction process4.29E-02
103GO:0048366: leaf development4.74E-02
RankGO TermAdjusted P value
1GO:0080082: esculin beta-glucosidase activity0.00E+00
2GO:0080081: 4-methylumbelliferyl-beta-D-glucopyranoside beta-glucosidase activity0.00E+00
3GO:0047668: amygdalin beta-glucosidase activity0.00E+00
4GO:0080083: beta-gentiobiose beta-glucosidase activity0.00E+00
5GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
6GO:0004567: beta-mannosidase activity0.00E+00
7GO:0031409: pigment binding1.27E-20
8GO:0016168: chlorophyll binding2.91E-17
9GO:0046872: metal ion binding3.70E-05
10GO:0033857: diphosphoinositol-pentakisphosphate kinase activity5.79E-05
11GO:0000829: inositol heptakisphosphate kinase activity5.79E-05
12GO:0080079: cellobiose glucosidase activity5.79E-05
13GO:0000828: inositol hexakisphosphate kinase activity5.79E-05
14GO:0046592: polyamine oxidase activity2.40E-04
15GO:0000156: phosphorelay response regulator activity4.39E-04
16GO:0004845: uracil phosphoribosyltransferase activity4.66E-04
17GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen5.92E-04
18GO:0015562: efflux transmembrane transporter activity7.24E-04
19GO:0004849: uridine kinase activity8.63E-04
20GO:0005515: protein binding9.40E-04
21GO:0000989: transcription factor activity, transcription factor binding1.48E-03
22GO:0009815: 1-aminocyclopropane-1-carboxylate oxidase activity1.48E-03
23GO:0016308: 1-phosphatidylinositol-4-phosphate 5-kinase activity1.83E-03
24GO:0047372: acylglycerol lipase activity2.02E-03
25GO:0004022: alcohol dehydrogenase (NAD) activity2.41E-03
26GO:0005315: inorganic phosphate transmembrane transporter activity2.41E-03
27GO:0004565: beta-galactosidase activity2.41E-03
28GO:0008131: primary amine oxidase activity2.62E-03
29GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen2.75E-03
30GO:0003712: transcription cofactor activity2.82E-03
31GO:0008324: cation transmembrane transporter activity3.49E-03
32GO:0005351: sugar:proton symporter activity3.59E-03
33GO:0004707: MAP kinase activity3.72E-03
34GO:0008514: organic anion transmembrane transporter activity4.44E-03
35GO:0004497: monooxygenase activity7.02E-03
36GO:0102483: scopolin beta-glucosidase activity8.71E-03
37GO:0003700: transcription factor activity, sequence-specific DNA binding1.01E-02
38GO:0003993: acid phosphatase activity1.14E-02
39GO:0008270: zinc ion binding1.15E-02
40GO:0008422: beta-glucosidase activity1.18E-02
41GO:0015293: symporter activity1.44E-02
42GO:0005198: structural molecule activity1.44E-02
43GO:0003677: DNA binding1.48E-02
44GO:0015171: amino acid transmembrane transporter activity1.75E-02
45GO:0022857: transmembrane transporter activity2.01E-02
46GO:0019825: oxygen binding2.63E-02
47GO:0015144: carbohydrate transmembrane transporter activity2.80E-02
48GO:0015297: antiporter activity2.99E-02
49GO:0005506: iron ion binding3.68E-02
50GO:0005215: transporter activity4.12E-02
51GO:0046983: protein dimerization activity4.96E-02
RankGO TermAdjusted P value
1GO:0030076: light-harvesting complex3.06E-18
2GO:0009522: photosystem I3.57E-16
3GO:0010287: plastoglobule6.40E-16
4GO:0009579: thylakoid1.40E-12
5GO:0009534: chloroplast thylakoid4.47E-11
6GO:0009535: chloroplast thylakoid membrane1.73E-09
7GO:0009523: photosystem II1.77E-09
8GO:0009941: chloroplast envelope7.70E-08
9GO:0016020: membrane2.34E-06
10GO:0042651: thylakoid membrane3.31E-06
11GO:0009517: PSII associated light-harvesting complex II3.53E-06
12GO:0016021: integral component of membrane8.95E-06
13GO:0009783: photosystem II antenna complex5.79E-05
14GO:0009533: chloroplast stromal thylakoid1.01E-03
15GO:0009507: chloroplast1.09E-03
16GO:0009538: photosystem I reaction center1.16E-03
17GO:0016607: nuclear speck1.88E-02
18GO:0005777: peroxisome2.12E-02
19GO:0005654: nucleoplasm2.41E-02
20GO:0005623: cell2.51E-02
21GO:0005618: cell wall4.40E-02
22GO:0009505: plant-type cell wall4.67E-02
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Gene type



Gene DE type