GO Enrichment Analysis of Co-expressed Genes with
AT1G79600
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 2 | GO:0033231: carbohydrate export | 0.00E+00 |
| 3 | GO:0046677: response to antibiotic | 0.00E+00 |
| 4 | GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process | 0.00E+00 |
| 5 | GO:0009661: chromoplast organization | 0.00E+00 |
| 6 | GO:1901401: regulation of tetrapyrrole metabolic process | 0.00E+00 |
| 7 | GO:0015995: chlorophyll biosynthetic process | 3.92E-07 |
| 8 | GO:0010114: response to red light | 1.50E-06 |
| 9 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 6.58E-06 |
| 10 | GO:0015755: fructose transport | 4.74E-05 |
| 11 | GO:1902334: fructose export from vacuole to cytoplasm | 4.74E-05 |
| 12 | GO:0042548: regulation of photosynthesis, light reaction | 1.17E-04 |
| 13 | GO:0006741: NADP biosynthetic process | 1.17E-04 |
| 14 | GO:0050992: dimethylallyl diphosphate biosynthetic process | 1.17E-04 |
| 15 | GO:1904143: positive regulation of carotenoid biosynthetic process | 1.17E-04 |
| 16 | GO:0048575: short-day photoperiodism, flowering | 2.00E-04 |
| 17 | GO:0019674: NAD metabolic process | 2.00E-04 |
| 18 | GO:0019363: pyridine nucleotide biosynthetic process | 2.94E-04 |
| 19 | GO:0007623: circadian rhythm | 3.03E-04 |
| 20 | GO:0009765: photosynthesis, light harvesting | 3.94E-04 |
| 21 | GO:0016120: carotene biosynthetic process | 5.00E-04 |
| 22 | GO:0016123: xanthophyll biosynthetic process | 5.00E-04 |
| 23 | GO:0009658: chloroplast organization | 5.31E-04 |
| 24 | GO:0009228: thiamine biosynthetic process | 6.13E-04 |
| 25 | GO:0009643: photosynthetic acclimation | 6.13E-04 |
| 26 | GO:0010218: response to far red light | 6.14E-04 |
| 27 | GO:0009637: response to blue light | 7.02E-04 |
| 28 | GO:0010189: vitamin E biosynthetic process | 7.31E-04 |
| 29 | GO:0015979: photosynthesis | 8.18E-04 |
| 30 | GO:1900056: negative regulation of leaf senescence | 8.54E-04 |
| 31 | GO:0009769: photosynthesis, light harvesting in photosystem II | 8.54E-04 |
| 32 | GO:0009645: response to low light intensity stimulus | 8.54E-04 |
| 33 | GO:0045454: cell redox homeostasis | 8.67E-04 |
| 34 | GO:0009642: response to light intensity | 9.81E-04 |
| 35 | GO:0050821: protein stabilization | 9.81E-04 |
| 36 | GO:0009657: plastid organization | 1.11E-03 |
| 37 | GO:0010100: negative regulation of photomorphogenesis | 1.11E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 1.11E-03 |
| 39 | GO:0055114: oxidation-reduction process | 1.15E-03 |
| 40 | GO:0010206: photosystem II repair | 1.25E-03 |
| 41 | GO:0010380: regulation of chlorophyll biosynthetic process | 1.40E-03 |
| 42 | GO:0006995: cellular response to nitrogen starvation | 1.55E-03 |
| 43 | GO:0006535: cysteine biosynthetic process from serine | 1.55E-03 |
| 44 | GO:0009688: abscisic acid biosynthetic process | 1.55E-03 |
| 45 | GO:0043085: positive regulation of catalytic activity | 1.70E-03 |
| 46 | GO:0009750: response to fructose | 1.70E-03 |
| 47 | GO:2000028: regulation of photoperiodism, flowering | 2.03E-03 |
| 48 | GO:0018107: peptidyl-threonine phosphorylation | 2.03E-03 |
| 49 | GO:0034976: response to endoplasmic reticulum stress | 2.56E-03 |
| 50 | GO:0006833: water transport | 2.56E-03 |
| 51 | GO:0019344: cysteine biosynthetic process | 2.74E-03 |
| 52 | GO:0009768: photosynthesis, light harvesting in photosystem I | 2.93E-03 |
| 53 | GO:0009269: response to desiccation | 3.12E-03 |
| 54 | GO:0016114: terpenoid biosynthetic process | 3.12E-03 |
| 55 | GO:0051260: protein homooligomerization | 3.12E-03 |
| 56 | GO:0010017: red or far-red light signaling pathway | 3.32E-03 |
| 57 | GO:0070417: cellular response to cold | 3.93E-03 |
| 58 | GO:0034220: ion transmembrane transport | 4.15E-03 |
| 59 | GO:0009958: positive gravitropism | 4.37E-03 |
| 60 | GO:0006662: glycerol ether metabolic process | 4.37E-03 |
| 61 | GO:0010182: sugar mediated signaling pathway | 4.37E-03 |
| 62 | GO:0007018: microtubule-based movement | 4.59E-03 |
| 63 | GO:0009646: response to absence of light | 4.59E-03 |
| 64 | GO:0010193: response to ozone | 5.04E-03 |
| 65 | GO:0009723: response to ethylene | 5.06E-03 |
| 66 | GO:0009414: response to water deprivation | 5.43E-03 |
| 67 | GO:0044550: secondary metabolite biosynthetic process | 5.89E-03 |
| 68 | GO:0009651: response to salt stress | 6.46E-03 |
| 69 | GO:0016311: dephosphorylation | 7.54E-03 |
| 70 | GO:0018298: protein-chromophore linkage | 7.81E-03 |
| 71 | GO:0009813: flavonoid biosynthetic process | 8.09E-03 |
| 72 | GO:0007568: aging | 8.65E-03 |
| 73 | GO:0009910: negative regulation of flower development | 8.65E-03 |
| 74 | GO:0006865: amino acid transport | 8.93E-03 |
| 75 | GO:0006810: transport | 9.12E-03 |
| 76 | GO:0034599: cellular response to oxidative stress | 9.51E-03 |
| 77 | GO:0009640: photomorphogenesis | 1.10E-02 |
| 78 | GO:0009644: response to high light intensity | 1.16E-02 |
| 79 | GO:0006812: cation transport | 1.29E-02 |
| 80 | GO:0006364: rRNA processing | 1.36E-02 |
| 81 | GO:0009585: red, far-red light phototransduction | 1.36E-02 |
| 82 | GO:0010224: response to UV-B | 1.39E-02 |
| 83 | GO:0006417: regulation of translation | 1.46E-02 |
| 84 | GO:0009624: response to nematode | 1.75E-02 |
| 85 | GO:0018105: peptidyl-serine phosphorylation | 1.78E-02 |
| 86 | GO:0006396: RNA processing | 1.78E-02 |
| 87 | GO:0042254: ribosome biogenesis | 3.56E-02 |
| 88 | GO:0006970: response to osmotic stress | 3.70E-02 |
| 89 | GO:0007049: cell cycle | 3.80E-02 |
| 90 | GO:0005975: carbohydrate metabolic process | 4.36E-02 |
| 91 | GO:0045892: negative regulation of transcription, DNA-templated | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 2 | GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity | 0.00E+00 |
| 3 | GO:0015038: glutathione disulfide oxidoreductase activity | 0.00E+00 |
| 4 | GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity | 0.00E+00 |
| 5 | GO:0015284: fructose uniporter activity | 0.00E+00 |
| 6 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 7 | GO:0004462: lactoylglutathione lyase activity | 6.58E-06 |
| 8 | GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity | 4.74E-05 |
| 9 | GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | 4.74E-05 |
| 10 | GO:0019172: glyoxalase III activity | 1.17E-04 |
| 11 | GO:0005353: fructose transmembrane transporter activity | 1.17E-04 |
| 12 | GO:0050017: L-3-cyanoalanine synthase activity | 1.17E-04 |
| 13 | GO:0004103: choline kinase activity | 1.17E-04 |
| 14 | GO:0016868: intramolecular transferase activity, phosphotransferases | 1.17E-04 |
| 15 | GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity | 1.17E-04 |
| 16 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 2.00E-04 |
| 17 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.94E-04 |
| 18 | GO:0051538: 3 iron, 4 sulfur cluster binding | 5.00E-04 |
| 19 | GO:0004602: glutathione peroxidase activity | 7.31E-04 |
| 20 | GO:0004124: cysteine synthase activity | 7.31E-04 |
| 21 | GO:0051537: 2 iron, 2 sulfur cluster binding | 9.62E-04 |
| 22 | GO:0003951: NAD+ kinase activity | 1.11E-03 |
| 23 | GO:0071949: FAD binding | 1.25E-03 |
| 24 | GO:0008047: enzyme activator activity | 1.55E-03 |
| 25 | GO:0008289: lipid binding | 1.69E-03 |
| 26 | GO:0015035: protein disulfide oxidoreductase activity | 1.71E-03 |
| 27 | GO:0051119: sugar transmembrane transporter activity | 2.38E-03 |
| 28 | GO:0031409: pigment binding | 2.56E-03 |
| 29 | GO:0003954: NADH dehydrogenase activity | 2.74E-03 |
| 30 | GO:0003756: protein disulfide isomerase activity | 3.73E-03 |
| 31 | GO:0003727: single-stranded RNA binding | 3.73E-03 |
| 32 | GO:0047134: protein-disulfide reductase activity | 3.93E-03 |
| 33 | GO:0004791: thioredoxin-disulfide reductase activity | 4.59E-03 |
| 34 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 5.52E-03 |
| 35 | GO:0015250: water channel activity | 6.50E-03 |
| 36 | GO:0016168: chlorophyll binding | 6.75E-03 |
| 37 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.22E-03 |
| 38 | GO:0003993: acid phosphatase activity | 9.51E-03 |
| 39 | GO:0043621: protein self-association | 1.16E-02 |
| 40 | GO:0016887: ATPase activity | 1.24E-02 |
| 41 | GO:0016298: lipase activity | 1.39E-02 |
| 42 | GO:0003777: microtubule motor activity | 1.46E-02 |
| 43 | GO:0015171: amino acid transmembrane transporter activity | 1.46E-02 |
| 44 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.09E-02 |
| 45 | GO:0016829: lyase activity | 2.16E-02 |
| 46 | GO:0030170: pyridoxal phosphate binding | 2.20E-02 |
| 47 | GO:0015297: antiporter activity | 2.49E-02 |
| 48 | GO:0008017: microtubule binding | 2.66E-02 |
| 49 | GO:0005506: iron ion binding | 2.84E-02 |
| 50 | GO:0042802: identical protein binding | 3.05E-02 |
| 51 | GO:0005215: transporter activity | 3.19E-02 |
| 52 | GO:0008168: methyltransferase activity | 3.42E-02 |
| 53 | GO:0046872: metal ion binding | 3.65E-02 |
| 54 | GO:0004672: protein kinase activity | 4.23E-02 |
| 55 | GO:0004871: signal transducer activity | 4.81E-02 |
| 56 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005943: phosphatidylinositol 3-kinase complex, class IA | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.71E-10 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.34E-09 |
| 4 | GO:0009941: chloroplast envelope | 1.87E-08 |
| 5 | GO:0009570: chloroplast stroma | 1.07E-06 |
| 6 | GO:0009534: chloroplast thylakoid | 4.32E-06 |
| 7 | GO:0031969: chloroplast membrane | 6.81E-05 |
| 8 | GO:0031304: intrinsic component of mitochondrial inner membrane | 1.17E-04 |
| 9 | GO:0042651: thylakoid membrane | 1.28E-04 |
| 10 | GO:0016605: PML body | 2.00E-04 |
| 11 | GO:0009517: PSII associated light-harvesting complex II | 3.94E-04 |
| 12 | GO:0016604: nuclear body | 1.40E-03 |
| 13 | GO:0009706: chloroplast inner membrane | 1.66E-03 |
| 14 | GO:0009543: chloroplast thylakoid lumen | 2.07E-03 |
| 15 | GO:0005623: cell | 2.13E-03 |
| 16 | GO:0030095: chloroplast photosystem II | 2.20E-03 |
| 17 | GO:0030076: light-harvesting complex | 2.38E-03 |
| 18 | GO:0005871: kinesin complex | 3.93E-03 |
| 19 | GO:0009522: photosystem I | 4.59E-03 |
| 20 | GO:0031965: nuclear membrane | 4.81E-03 |
| 21 | GO:0009523: photosystem II | 4.81E-03 |
| 22 | GO:0031977: thylakoid lumen | 1.04E-02 |
| 23 | GO:0016607: nuclear speck | 1.57E-02 |
| 24 | GO:0005834: heterotrimeric G-protein complex | 1.60E-02 |
| 25 | GO:0005777: peroxisome | 1.63E-02 |
| 26 | GO:0009579: thylakoid | 1.70E-02 |
| 27 | GO:0010287: plastoglobule | 1.97E-02 |
| 28 | GO:0009705: plant-type vacuole membrane | 2.57E-02 |
| 29 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.75E-02 |
| 30 | GO:0005874: microtubule | 4.00E-02 |