GO Enrichment Analysis of Co-expressed Genes with
AT1G79470
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0039694: viral RNA genome replication | 0.00E+00 |
| 2 | GO:0031564: transcription antitermination | 0.00E+00 |
| 3 | GO:0007141: male meiosis I | 0.00E+00 |
| 4 | GO:0006884: cell volume homeostasis | 0.00E+00 |
| 5 | GO:0048026: positive regulation of mRNA splicing, via spliceosome | 3.12E-05 |
| 6 | GO:0006422: aspartyl-tRNA aminoacylation | 3.12E-05 |
| 7 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 7.88E-05 |
| 8 | GO:0009410: response to xenobiotic stimulus | 1.37E-04 |
| 9 | GO:0006421: asparaginyl-tRNA aminoacylation | 1.37E-04 |
| 10 | GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening | 1.37E-04 |
| 11 | GO:0000973: posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery | 2.04E-04 |
| 12 | GO:0001676: long-chain fatty acid metabolic process | 2.04E-04 |
| 13 | GO:0010405: arabinogalactan protein metabolic process | 4.34E-04 |
| 14 | GO:0048232: male gamete generation | 4.34E-04 |
| 15 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 4.34E-04 |
| 16 | GO:0045040: protein import into mitochondrial outer membrane | 4.34E-04 |
| 17 | GO:1900056: negative regulation of leaf senescence | 6.07E-04 |
| 18 | GO:0006821: chloride transport | 6.07E-04 |
| 19 | GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline | 6.99E-04 |
| 20 | GO:0000387: spliceosomal snRNP assembly | 9.92E-04 |
| 21 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 9.92E-04 |
| 22 | GO:0006298: mismatch repair | 1.10E-03 |
| 23 | GO:0051026: chiasma assembly | 1.10E-03 |
| 24 | GO:0006312: mitotic recombination | 1.31E-03 |
| 25 | GO:0009845: seed germination | 1.33E-03 |
| 26 | GO:0006626: protein targeting to mitochondrion | 1.43E-03 |
| 27 | GO:0007034: vacuolar transport | 1.55E-03 |
| 28 | GO:0006406: mRNA export from nucleus | 1.92E-03 |
| 29 | GO:0000027: ribosomal large subunit assembly | 1.92E-03 |
| 30 | GO:0009863: salicylic acid mediated signaling pathway | 1.92E-03 |
| 31 | GO:0030150: protein import into mitochondrial matrix | 1.92E-03 |
| 32 | GO:0010187: negative regulation of seed germination | 1.92E-03 |
| 33 | GO:0080092: regulation of pollen tube growth | 2.32E-03 |
| 34 | GO:0009814: defense response, incompatible interaction | 2.32E-03 |
| 35 | GO:0007131: reciprocal meiotic recombination | 2.32E-03 |
| 36 | GO:0009414: response to water deprivation | 2.75E-03 |
| 37 | GO:0010501: RNA secondary structure unwinding | 2.90E-03 |
| 38 | GO:0006606: protein import into nucleus | 2.90E-03 |
| 39 | GO:0010154: fruit development | 3.05E-03 |
| 40 | GO:0010183: pollen tube guidance | 3.36E-03 |
| 41 | GO:0010193: response to ozone | 3.51E-03 |
| 42 | GO:0045454: cell redox homeostasis | 3.82E-03 |
| 43 | GO:0030163: protein catabolic process | 3.84E-03 |
| 44 | GO:0015031: protein transport | 3.84E-03 |
| 45 | GO:0006310: DNA recombination | 4.00E-03 |
| 46 | GO:0009409: response to cold | 4.16E-03 |
| 47 | GO:0046686: response to cadmium ion | 4.97E-03 |
| 48 | GO:0009631: cold acclimation | 5.99E-03 |
| 49 | GO:0009867: jasmonic acid mediated signaling pathway | 6.38E-03 |
| 50 | GO:0045087: innate immune response | 6.38E-03 |
| 51 | GO:0009734: auxin-activated signaling pathway | 6.61E-03 |
| 52 | GO:0006631: fatty acid metabolic process | 7.19E-03 |
| 53 | GO:0009555: pollen development | 8.33E-03 |
| 54 | GO:0006260: DNA replication | 8.68E-03 |
| 55 | GO:0006486: protein glycosylation | 9.36E-03 |
| 56 | GO:0048316: seed development | 1.08E-02 |
| 57 | GO:0009553: embryo sac development | 1.17E-02 |
| 58 | GO:0009651: response to salt stress | 1.32E-02 |
| 59 | GO:0009451: RNA modification | 1.80E-02 |
| 60 | GO:0042254: ribosome biogenesis | 2.44E-02 |
| 61 | GO:0009860: pollen tube growth | 2.54E-02 |
| 62 | GO:0006970: response to osmotic stress | 2.54E-02 |
| 63 | GO:0048366: leaf development | 2.71E-02 |
| 64 | GO:0016192: vesicle-mediated transport | 2.91E-02 |
| 65 | GO:0045892: negative regulation of transcription, DNA-templated | 3.23E-02 |
| 66 | GO:0006886: intracellular protein transport | 3.27E-02 |
| 67 | GO:0006281: DNA repair | 3.71E-02 |
| 68 | GO:0009408: response to heat | 3.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050220: prostaglandin-E synthase activity | 0.00E+00 |
| 2 | GO:0001072: transcription antitermination factor activity, RNA binding | 0.00E+00 |
| 3 | GO:0004815: aspartate-tRNA ligase activity | 3.12E-05 |
| 4 | GO:0070008: serine-type exopeptidase activity | 3.12E-05 |
| 5 | GO:0004816: asparagine-tRNA ligase activity | 1.37E-04 |
| 6 | GO:0052692: raffinose alpha-galactosidase activity | 1.37E-04 |
| 7 | GO:0004557: alpha-galactosidase activity | 1.37E-04 |
| 8 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.32E-04 |
| 9 | GO:0003746: translation elongation factor activity | 4.20E-04 |
| 10 | GO:0003697: single-stranded DNA binding | 4.20E-04 |
| 11 | GO:0030983: mismatched DNA binding | 4.34E-04 |
| 12 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 4.34E-04 |
| 13 | GO:0004656: procollagen-proline 4-dioxygenase activity | 5.20E-04 |
| 14 | GO:0102391: decanoate--CoA ligase activity | 5.20E-04 |
| 15 | GO:0008320: protein transmembrane transporter activity | 6.07E-04 |
| 16 | GO:0004467: long-chain fatty acid-CoA ligase activity | 6.07E-04 |
| 17 | GO:0017056: structural constituent of nuclear pore | 6.99E-04 |
| 18 | GO:0030674: protein binding, bridging | 6.99E-04 |
| 19 | GO:0008135: translation factor activity, RNA binding | 7.94E-04 |
| 20 | GO:0005487: nucleocytoplasmic transporter activity | 9.92E-04 |
| 21 | GO:0000166: nucleotide binding | 1.17E-03 |
| 22 | GO:0008378: galactosyltransferase activity | 1.31E-03 |
| 23 | GO:0000175: 3'-5'-exoribonuclease activity | 1.43E-03 |
| 24 | GO:0015266: protein channel activity | 1.43E-03 |
| 25 | GO:0004535: poly(A)-specific ribonuclease activity | 1.55E-03 |
| 26 | GO:0031418: L-ascorbic acid binding | 1.92E-03 |
| 27 | GO:0005528: FK506 binding | 1.92E-03 |
| 28 | GO:0005216: ion channel activity | 2.05E-03 |
| 29 | GO:0008408: 3'-5' exonuclease activity | 2.19E-03 |
| 30 | GO:0004540: ribonuclease activity | 2.19E-03 |
| 31 | GO:0047134: protein-disulfide reductase activity | 2.75E-03 |
| 32 | GO:0004791: thioredoxin-disulfide reductase activity | 3.20E-03 |
| 33 | GO:0004004: ATP-dependent RNA helicase activity | 5.05E-03 |
| 34 | GO:0008236: serine-type peptidase activity | 5.23E-03 |
| 35 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 6.38E-03 |
| 36 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 8.46E-03 |
| 37 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 9.36E-03 |
| 38 | GO:0003690: double-stranded DNA binding | 9.59E-03 |
| 39 | GO:0003723: RNA binding | 1.02E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.22E-02 |
| 41 | GO:0016746: transferase activity, transferring acyl groups | 1.22E-02 |
| 42 | GO:0008026: ATP-dependent helicase activity | 1.25E-02 |
| 43 | GO:0004386: helicase activity | 1.27E-02 |
| 44 | GO:0005525: GTP binding | 1.37E-02 |
| 45 | GO:0016758: transferase activity, transferring hexosyl groups | 1.38E-02 |
| 46 | GO:0003677: DNA binding | 1.41E-02 |
| 47 | GO:0004252: serine-type endopeptidase activity | 1.51E-02 |
| 48 | GO:0003676: nucleic acid binding | 1.71E-02 |
| 49 | GO:0005515: protein binding | 1.86E-02 |
| 50 | GO:0042802: identical protein binding | 2.09E-02 |
| 51 | GO:0005524: ATP binding | 2.47E-02 |
| 52 | GO:0003924: GTPase activity | 3.71E-02 |
| 53 | GO:0009055: electron carrier activity | 3.90E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034709: methylosome | 0.00E+00 |
| 2 | GO:0019034: viral replication complex | 0.00E+00 |
| 3 | GO:0030014: CCR4-NOT complex | 3.12E-05 |
| 4 | GO:0005712: chiasma | 3.12E-05 |
| 5 | GO:0032783: ELL-EAF complex | 3.12E-05 |
| 6 | GO:0032389: MutLalpha complex | 3.12E-05 |
| 7 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 1.06E-04 |
| 8 | GO:0000790: nuclear chromatin | 1.16E-04 |
| 9 | GO:0030139: endocytic vesicle | 1.37E-04 |
| 10 | GO:0034715: pICln-Sm protein complex | 1.37E-04 |
| 11 | GO:0031080: nuclear pore outer ring | 1.37E-04 |
| 12 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 3.00E-04 |
| 13 | GO:0000795: synaptonemal complex | 3.53E-04 |
| 14 | GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane | 6.07E-04 |
| 15 | GO:0031305: integral component of mitochondrial inner membrane | 6.99E-04 |
| 16 | GO:0005742: mitochondrial outer membrane translocase complex | 7.94E-04 |
| 17 | GO:0005759: mitochondrial matrix | 1.54E-03 |
| 18 | GO:0043234: protein complex | 1.79E-03 |
| 19 | GO:0005741: mitochondrial outer membrane | 2.19E-03 |
| 20 | GO:0032580: Golgi cisterna membrane | 4.00E-03 |
| 21 | GO:0005743: mitochondrial inner membrane | 4.38E-03 |
| 22 | GO:0019005: SCF ubiquitin ligase complex | 5.42E-03 |
| 23 | GO:0031902: late endosome membrane | 7.19E-03 |
| 24 | GO:0005783: endoplasmic reticulum | 8.62E-03 |
| 25 | GO:0005635: nuclear envelope | 9.82E-03 |
| 26 | GO:0016607: nuclear speck | 1.08E-02 |
| 27 | GO:0005834: heterotrimeric G-protein complex | 1.10E-02 |
| 28 | GO:0005829: cytosol | 1.19E-02 |
| 29 | GO:0005739: mitochondrion | 1.41E-02 |
| 30 | GO:0005840: ribosome | 1.77E-02 |
| 31 | GO:0005789: endoplasmic reticulum membrane | 2.59E-02 |
| 32 | GO:0005634: nucleus | 4.21E-02 |