co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78920

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072321: chaperone-mediated protein transport	0.00E+00
2	GO:0072660: maintenance of protein location in plasma membrane	0.00E+00
3	GO:0042430: indole-containing compound metabolic process	0.00E+00
4	GO:0019427: acetyl-CoA biosynthetic process from acetate	0.00E+00
5	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
6	GO:0019428: allantoin biosynthetic process	0.00E+00
7	GO:0006468: protein phosphorylation	5.63E-08
8	GO:0006457: protein folding	1.07E-06
9	GO:0034976: response to endoplasmic reticulum stress	1.66E-06
10	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.80E-06
11	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.80E-06
12	GO:0031349: positive regulation of defense response	2.80E-06
13	GO:0006099: tricarboxylic acid cycle	5.76E-06
14	GO:0010197: polar nucleus fusion	9.91E-06
15	GO:0072661: protein targeting to plasma membrane	1.02E-05
16	GO:0060548: negative regulation of cell death	4.19E-05
17	GO:0042742: defense response to bacterium	4.66E-05
18	GO:0010942: positive regulation of cell death	9.77E-05
19	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.34E-04
20	GO:0006886: intracellular protein transport	1.46E-04
21	GO:0006102: isocitrate metabolic process	2.25E-04
22	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	2.25E-04
23	GO:0006605: protein targeting	2.25E-04
24	GO:0060862: negative regulation of floral organ abscission	2.46E-04
25	GO:0006144: purine nucleobase metabolic process	2.46E-04
26	GO:0006083: acetate metabolic process	2.46E-04
27	GO:0019276: UDP-N-acetylgalactosamine metabolic process	2.46E-04
28	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.46E-04
29	GO:0006430: lysyl-tRNA aminoacylation	2.46E-04
30	GO:0001560: regulation of cell growth by extracellular stimulus	2.46E-04
31	GO:0019628: urate catabolic process	2.46E-04
32	GO:0006047: UDP-N-acetylglucosamine metabolic process	2.46E-04
33	GO:0051245: negative regulation of cellular defense response	2.46E-04
34	GO:0055081: anion homeostasis	2.46E-04
35	GO:0043687: post-translational protein modification	2.46E-04
36	GO:0006680: glucosylceramide catabolic process	2.46E-04
37	GO:0046244: salicylic acid catabolic process	2.46E-04
38	GO:0009553: embryo sac development	3.89E-04
39	GO:0043069: negative regulation of programmed cell death	4.67E-04
40	GO:0002221: pattern recognition receptor signaling pathway	5.44E-04
41	GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine	5.44E-04
42	GO:0010618: aerenchyma formation	5.44E-04
43	GO:0080181: lateral root branching	5.44E-04
44	GO:0015865: purine nucleotide transport	5.44E-04
45	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	5.44E-04
46	GO:0051258: protein polymerization	5.44E-04
47	GO:0051252: regulation of RNA metabolic process	5.44E-04
48	GO:0045454: cell redox homeostasis	7.24E-04
49	GO:0010119: regulation of stomatal movement	7.31E-04
50	GO:0070588: calcium ion transmembrane transport	8.79E-04
51	GO:0006011: UDP-glucose metabolic process	8.83E-04
52	GO:0045039: protein import into mitochondrial inner membrane	8.83E-04
53	GO:0015695: organic cation transport	8.83E-04
54	GO:0006048: UDP-N-acetylglucosamine biosynthetic process	8.83E-04
55	GO:1900140: regulation of seedling development	8.83E-04
56	GO:0010359: regulation of anion channel activity	8.83E-04
57	GO:0055074: calcium ion homeostasis	8.83E-04
58	GO:0000027: ribosomal large subunit assembly	1.08E-03
59	GO:0000187: activation of MAPK activity	1.26E-03
60	GO:0002239: response to oomycetes	1.26E-03
61	GO:0046902: regulation of mitochondrial membrane permeability	1.26E-03
62	GO:0007276: gamete generation	1.26E-03
63	GO:0006612: protein targeting to membrane	1.26E-03
64	GO:0010148: transpiration	1.26E-03
65	GO:0015696: ammonium transport	1.26E-03
66	GO:0009855: determination of bilateral symmetry	1.26E-03
67	GO:0051289: protein homotetramerization	1.26E-03
68	GO:0016998: cell wall macromolecule catabolic process	1.30E-03
69	GO:0031348: negative regulation of defense response	1.42E-03
70	GO:0009651: response to salt stress	1.53E-03
71	GO:0072488: ammonium transmembrane transport	1.68E-03
72	GO:0010363: regulation of plant-type hypersensitive response	1.68E-03
73	GO:0042273: ribosomal large subunit biogenesis	1.68E-03
74	GO:0000460: maturation of 5.8S rRNA	1.68E-03
75	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.68E-03
76	GO:0009306: protein secretion	1.68E-03
77	GO:0080142: regulation of salicylic acid biosynthetic process	1.68E-03
78	GO:0031365: N-terminal protein amino acid modification	2.15E-03
79	GO:0000304: response to singlet oxygen	2.15E-03
80	GO:0006952: defense response	2.15E-03
81	GO:0018279: protein N-linked glycosylation via asparagine	2.15E-03
82	GO:0046283: anthocyanin-containing compound metabolic process	2.15E-03
83	GO:0009626: plant-type hypersensitive response	2.19E-03
84	GO:0046686: response to cadmium ion	2.22E-03
85	GO:0009620: response to fungus	2.28E-03
86	GO:0000302: response to reactive oxygen species	2.61E-03
87	GO:0000470: maturation of LSU-rRNA	2.65E-03
88	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.65E-03
89	GO:0060918: auxin transport	2.65E-03
90	GO:0047484: regulation of response to osmotic stress	2.65E-03
91	GO:0000741: karyogamy	2.65E-03
92	GO:0010310: regulation of hydrogen peroxide metabolic process	3.18E-03
93	GO:0006694: steroid biosynthetic process	3.18E-03
94	GO:0050832: defense response to fungus	3.21E-03
95	GO:0071446: cellular response to salicylic acid stimulus	3.75E-03
96	GO:0080186: developmental vegetative growth	3.75E-03
97	GO:0006122: mitochondrial electron transport, ubiquinol to cytochrome c	3.75E-03
98	GO:0009627: systemic acquired resistance	4.20E-03
99	GO:0006906: vesicle fusion	4.20E-03
100	GO:0031540: regulation of anthocyanin biosynthetic process	4.35E-03
101	GO:0009787: regulation of abscisic acid-activated signaling pathway	4.35E-03
102	GO:2000031: regulation of salicylic acid mediated signaling pathway	4.98E-03
103	GO:0009699: phenylpropanoid biosynthetic process	4.98E-03
104	GO:0010204: defense response signaling pathway, resistance gene-independent	4.98E-03
105	GO:0009409: response to cold	5.29E-03
106	GO:0006499: N-terminal protein myristoylation	5.41E-03
107	GO:0007338: single fertilization	5.65E-03
108	GO:0010043: response to zinc ion	5.67E-03
109	GO:0007166: cell surface receptor signaling pathway	6.07E-03
110	GO:0009867: jasmonic acid mediated signaling pathway	6.21E-03
111	GO:0045087: innate immune response	6.21E-03
112	GO:0010205: photoinhibition	6.33E-03
113	GO:0043067: regulation of programmed cell death	6.33E-03
114	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.33E-03
115	GO:0010162: seed dormancy process	7.06E-03
116	GO:0000103: sulfate assimilation	7.06E-03
117	GO:0006032: chitin catabolic process	7.06E-03
118	GO:0006887: exocytosis	7.39E-03
119	GO:0072593: reactive oxygen species metabolic process	7.80E-03
120	GO:0071365: cellular response to auxin stimulus	8.58E-03
121	GO:0010075: regulation of meristem growth	9.38E-03
122	GO:0006626: protein targeting to mitochondrion	9.38E-03
123	GO:0031347: regulation of defense response	9.71E-03
124	GO:0009934: regulation of meristem structural organization	1.02E-02
125	GO:0002237: response to molecule of bacterial origin	1.02E-02
126	GO:0006364: rRNA processing	1.08E-02
127	GO:0042343: indole glucosinolate metabolic process	1.11E-02
128	GO:0080167: response to karrikin	1.17E-02
129	GO:0010200: response to chitin	1.23E-02
130	GO:0016192: vesicle-mediated transport	1.25E-02
131	GO:0046777: protein autophosphorylation	1.28E-02
132	GO:0006487: protein N-linked glycosylation	1.29E-02
133	GO:0009944: polarity specification of adaxial/abaxial axis	1.29E-02
134	GO:0009863: salicylic acid mediated signaling pathway	1.29E-02
135	GO:0080147: root hair cell development	1.29E-02
136	GO:0030150: protein import into mitochondrial matrix	1.29E-02
137	GO:0010187: negative regulation of seed germination	1.29E-02
138	GO:0051302: regulation of cell division	1.38E-02
139	GO:0098542: defense response to other organism	1.47E-02
140	GO:0048278: vesicle docking	1.47E-02
141	GO:0015031: protein transport	1.48E-02
142	GO:0019748: secondary metabolic process	1.57E-02
143	GO:0009814: defense response, incompatible interaction	1.57E-02
144	GO:0030433: ubiquitin-dependent ERAD pathway	1.57E-02
145	GO:0018105: peptidyl-serine phosphorylation	1.59E-02
146	GO:0009742: brassinosteroid mediated signaling pathway	1.64E-02
147	GO:0009294: DNA mediated transformation	1.67E-02
148	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.88E-02
149	GO:0042147: retrograde transport, endosome to Golgi	1.88E-02
150	GO:0009408: response to heat	1.92E-02
151	GO:0008033: tRNA processing	1.99E-02
152	GO:0010051: xylem and phloem pattern formation	1.99E-02
153	GO:0042391: regulation of membrane potential	1.99E-02
154	GO:0009058: biosynthetic process	2.04E-02
155	GO:0009960: endosperm development	2.09E-02
156	GO:0006662: glycerol ether metabolic process	2.09E-02
157	GO:0061025: membrane fusion	2.21E-02
158	GO:0006623: protein targeting to vacuole	2.32E-02
159	GO:0010183: pollen tube guidance	2.32E-02
160	GO:0002229: defense response to oomycetes	2.43E-02
161	GO:0006891: intra-Golgi vesicle-mediated transport	2.43E-02
162	GO:0030163: protein catabolic process	2.67E-02
163	GO:0010150: leaf senescence	2.67E-02
164	GO:0009567: double fertilization forming a zygote and endosperm	2.79E-02
165	GO:0009615: response to virus	3.16E-02
166	GO:0001666: response to hypoxia	3.16E-02
167	GO:0009617: response to bacterium	3.19E-02
168	GO:0009737: response to abscisic acid	3.54E-02
169	GO:0008219: cell death	3.82E-02
170	GO:0010311: lateral root formation	3.96E-02
171	GO:0009793: embryo development ending in seed dormancy	4.04E-02
172	GO:0035556: intracellular signal transduction	4.20E-02
173	GO:0009631: cold acclimation	4.24E-02
174	GO:0034599: cellular response to oxidative stress	4.66E-02

Rank	GO Term	Adjusted P value
1	GO:0033971: hydroxyisourate hydrolase activity	0.00E+00
2	GO:0051997: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity	0.00E+00
3	GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	0.00E+00
4	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
5	GO:0004164: diphthine synthase activity	0.00E+00
6	GO:0005212: structural constituent of eye lens	0.00E+00
7	GO:0005524: ATP binding	2.13E-07
8	GO:0016301: kinase activity	8.59E-07
9	GO:0004776: succinate-CoA ligase (GDP-forming) activity	2.80E-06
10	GO:0043021: ribonucleoprotein complex binding	2.80E-06
11	GO:0004775: succinate-CoA ligase (ADP-forming) activity	2.80E-06
12	GO:0051082: unfolded protein binding	3.29E-06
13	GO:0004674: protein serine/threonine kinase activity	1.30E-05
14	GO:0004449: isocitrate dehydrogenase (NAD+) activity	2.31E-05
15	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	6.67E-05
16	GO:0004656: procollagen-proline 4-dioxygenase activity	1.34E-04
17	GO:0003756: protein disulfide isomerase activity	1.42E-04
18	GO:0004672: protein kinase activity	1.62E-04
19	GO:0000166: nucleotide binding	1.62E-04
20	GO:0004714: transmembrane receptor protein tyrosine kinase activity	2.25E-04
21	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.46E-04
22	GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity	2.46E-04
23	GO:0003987: acetate-CoA ligase activity	2.46E-04
24	GO:0004824: lysine-tRNA ligase activity	2.46E-04
25	GO:0015085: calcium ion transmembrane transporter activity	2.46E-04
26	GO:0048037: cofactor binding	2.46E-04
27	GO:0004348: glucosylceramidase activity	2.46E-04
28	GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity	2.46E-04
29	GO:0005516: calmodulin binding	4.35E-04
30	GO:0004683: calmodulin-dependent protein kinase activity	5.35E-04
31	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.44E-04
32	GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity	5.44E-04
33	GO:0008428: ribonuclease inhibitor activity	5.44E-04
34	GO:0035241: protein-arginine omega-N monomethyltransferase activity	5.44E-04
35	GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity	5.44E-04
36	GO:0005388: calcium-transporting ATPase activity	7.00E-04
37	GO:0008565: protein transporter activity	7.60E-04
38	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	8.21E-04
39	GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity	8.83E-04
40	GO:0008469: histone-arginine N-methyltransferase activity	8.83E-04
41	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	8.83E-04
42	GO:0004148: dihydrolipoyl dehydrogenase activity	8.83E-04
43	GO:0033612: receptor serine/threonine kinase binding	1.30E-03
44	GO:0043495: protein anchor	1.68E-03
45	GO:0004576: oligosaccharyl transferase activity	1.68E-03
46	GO:0016298: lipase activity	1.70E-03
47	GO:0005471: ATP:ADP antiporter activity	2.15E-03
48	GO:0008948: oxaloacetate decarboxylase activity	2.15E-03
49	GO:0005509: calcium ion binding	2.48E-03
50	GO:0008519: ammonium transmembrane transporter activity	2.65E-03
51	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.65E-03
52	GO:0016208: AMP binding	2.65E-03
53	GO:0008235: metalloexopeptidase activity	3.75E-03
54	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.75E-03
55	GO:0030515: snoRNA binding	3.75E-03
56	GO:0009931: calcium-dependent protein serine/threonine kinase activity	4.20E-03
57	GO:0004708: MAP kinase kinase activity	4.35E-03
58	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	4.68E-03
59	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	4.90E-03
60	GO:0005507: copper ion binding	5.30E-03
61	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.33E-03
62	GO:0000149: SNARE binding	6.78E-03
63	GO:0004568: chitinase activity	7.06E-03
64	GO:0004713: protein tyrosine kinase activity	7.06E-03
65	GO:0004177: aminopeptidase activity	7.80E-03
66	GO:0008559: xenobiotic-transporting ATPase activity	7.80E-03
67	GO:0005484: SNAP receptor activity	8.02E-03
68	GO:0008168: methyltransferase activity	8.50E-03
69	GO:0031072: heat shock protein binding	9.38E-03
70	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	9.38E-03
71	GO:0030552: cAMP binding	1.11E-02
72	GO:0030553: cGMP binding	1.11E-02
73	GO:0008061: chitin binding	1.11E-02
74	GO:0003712: transcription cofactor activity	1.11E-02
75	GO:0031418: L-ascorbic acid binding	1.29E-02
76	GO:0004407: histone deacetylase activity	1.29E-02
77	GO:0005216: ion channel activity	1.38E-02
78	GO:0004707: MAP kinase activity	1.47E-02
79	GO:0016779: nucleotidyltransferase activity	1.57E-02
80	GO:0030246: carbohydrate binding	1.71E-02
81	GO:0008514: organic anion transmembrane transporter activity	1.77E-02
82	GO:0047134: protein-disulfide reductase activity	1.88E-02
83	GO:0005249: voltage-gated potassium channel activity	1.99E-02
84	GO:0030551: cyclic nucleotide binding	1.99E-02
85	GO:0030276: clathrin binding	2.09E-02
86	GO:0004791: thioredoxin-disulfide reductase activity	2.21E-02
87	GO:0010181: FMN binding	2.21E-02
88	GO:0046872: metal ion binding	2.44E-02
89	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.67E-02
90	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.91E-02
91	GO:0051213: dioxygenase activity	3.16E-02
92	GO:0004806: triglyceride lipase activity	3.55E-02
93	GO:0004721: phosphoprotein phosphatase activity	3.55E-02
94	GO:0005515: protein binding	3.65E-02
95	GO:0000287: magnesium ion binding	4.05E-02
96	GO:0004222: metalloendopeptidase activity	4.10E-02
97	GO:0050897: cobalt ion binding	4.24E-02
98	GO:0003746: translation elongation factor activity	4.52E-02
99	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.81E-02
100	GO:0051539: 4 iron, 4 sulfur cluster binding	4.96E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0005788: endoplasmic reticulum lumen	2.09E-11
4	GO:0005783: endoplasmic reticulum	8.69E-11
5	GO:0005886: plasma membrane	1.58E-10
6	GO:0005774: vacuolar membrane	3.12E-07
7	GO:0070545: PeBoW complex	2.80E-06
8	GO:0009506: plasmodesma	1.14E-05
9	GO:0008250: oligosaccharyltransferase complex	6.67E-05
10	GO:0030687: preribosome, large subunit precursor	1.77E-04
11	GO:0005794: Golgi apparatus	1.86E-04
12	GO:0045252: oxoglutarate dehydrogenase complex	2.46E-04
13	GO:0031234: extrinsic component of cytoplasmic side of plasma membrane	2.46E-04
14	GO:0030665: clathrin-coated vesicle membrane	3.99E-04
15	GO:0016021: integral component of membrane	4.19E-04
16	GO:0005773: vacuole	7.18E-04
17	GO:0005829: cytosol	7.52E-04
18	GO:0005887: integral component of plasma membrane	1.78E-03
19	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.09E-03
20	GO:0005789: endoplasmic reticulum membrane	2.13E-03
21	GO:0009504: cell plate	2.44E-03
22	GO:0030904: retromer complex	2.65E-03
23	GO:0031428: box C/D snoRNP complex	2.65E-03
24	GO:0005623: cell	3.52E-03
25	GO:0030131: clathrin adaptor complex	4.35E-03
26	GO:0019005: SCF ubiquitin ligase complex	4.90E-03
27	GO:0000326: protein storage vacuole	4.98E-03
28	GO:0009514: glyoxysome	4.98E-03
29	GO:0031901: early endosome membrane	5.65E-03
30	GO:0005802: trans-Golgi network	6.51E-03
31	GO:0005740: mitochondrial envelope	7.06E-03
32	GO:0017119: Golgi transport complex	7.06E-03
33	GO:0031201: SNARE complex	7.39E-03
34	GO:0031902: late endosome membrane	7.39E-03
35	GO:0005768: endosome	8.15E-03
36	GO:0005730: nucleolus	8.18E-03
37	GO:0032040: small-subunit processome	8.58E-03
38	GO:0031012: extracellular matrix	9.38E-03
39	GO:0005750: mitochondrial respiratory chain complex III	1.02E-02
40	GO:0005795: Golgi stack	1.11E-02
41	GO:0005758: mitochondrial intermembrane space	1.29E-02
42	GO:0016020: membrane	1.33E-02
43	GO:0005834: heterotrimeric G-protein complex	1.37E-02
44	GO:0009505: plant-type cell wall	1.45E-02
45	GO:0005618: cell wall	1.65E-02
46	GO:0005743: mitochondrial inner membrane	1.76E-02
47	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.77E-02
48	GO:0031225: anchored component of membrane	2.13E-02
49	GO:0019898: extrinsic component of membrane	2.32E-02
50	GO:0016592: mediator complex	2.55E-02
51	GO:0005622: intracellular	2.58E-02
52	GO:0000932: P-body	3.16E-02
53	GO:0000151: ubiquitin ligase complex	3.82E-02
54	GO:0000325: plant-type vacuole	4.24E-02