GO Enrichment Analysis of Co-expressed Genes with
AT1G78680
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 3 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 4 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 5 | GO:0009704: de-etiolation | 9.60E-06 |
| 6 | GO:0071277: cellular response to calcium ion | 3.25E-05 |
| 7 | GO:0009443: pyridoxal 5'-phosphate salvage | 3.25E-05 |
| 8 | GO:0034755: iron ion transmembrane transport | 8.18E-05 |
| 9 | GO:0046836: glycolipid transport | 2.11E-04 |
| 10 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.11E-04 |
| 11 | GO:0080110: sporopollenin biosynthetic process | 3.65E-04 |
| 12 | GO:0042549: photosystem II stabilization | 4.48E-04 |
| 13 | GO:0042026: protein refolding | 5.36E-04 |
| 14 | GO:0006458: 'de novo' protein folding | 5.36E-04 |
| 15 | GO:0009657: plastid organization | 8.20E-04 |
| 16 | GO:0017004: cytochrome complex assembly | 8.20E-04 |
| 17 | GO:0009821: alkaloid biosynthetic process | 9.20E-04 |
| 18 | GO:0090333: regulation of stomatal closure | 9.20E-04 |
| 19 | GO:1900865: chloroplast RNA modification | 1.02E-03 |
| 20 | GO:0009773: photosynthetic electron transport in photosystem I | 1.24E-03 |
| 21 | GO:0006415: translational termination | 1.24E-03 |
| 22 | GO:0006879: cellular iron ion homeostasis | 1.24E-03 |
| 23 | GO:0010207: photosystem II assembly | 1.60E-03 |
| 24 | GO:0016575: histone deacetylation | 2.12E-03 |
| 25 | GO:0061077: chaperone-mediated protein folding | 2.26E-03 |
| 26 | GO:0006508: proteolysis | 2.68E-03 |
| 27 | GO:0010584: pollen exine formation | 2.69E-03 |
| 28 | GO:0009658: chloroplast organization | 2.72E-03 |
| 29 | GO:0006814: sodium ion transport | 3.31E-03 |
| 30 | GO:0080156: mitochondrial mRNA modification | 3.63E-03 |
| 31 | GO:0006810: transport | 4.91E-03 |
| 32 | GO:0006364: rRNA processing | 9.69E-03 |
| 33 | GO:0006417: regulation of translation | 1.04E-02 |
| 34 | GO:0006396: RNA processing | 1.27E-02 |
| 35 | GO:0009058: biosynthetic process | 1.51E-02 |
| 36 | GO:0042254: ribosome biogenesis | 2.53E-02 |
| 37 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.98E-02 |
| 38 | GO:0032259: methylation | 3.72E-02 |
| 39 | GO:0009753: response to jasmonic acid | 4.04E-02 |
| 40 | GO:0009793: embryo development ending in seed dormancy | 4.11E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 2 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 3 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 4 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 5 | GO:0004033: aldo-keto reductase (NADP) activity | 9.60E-06 |
| 6 | GO:0003867: 4-aminobutyrate transaminase activity | 3.25E-05 |
| 7 | GO:0070006: metalloaminopeptidase activity | 3.25E-05 |
| 8 | GO:0070402: NADPH binding | 1.42E-04 |
| 9 | GO:0048487: beta-tubulin binding | 2.11E-04 |
| 10 | GO:0016149: translation release factor activity, codon specific | 2.11E-04 |
| 11 | GO:0008508: bile acid:sodium symporter activity | 2.11E-04 |
| 12 | GO:0017089: glycolipid transporter activity | 2.11E-04 |
| 13 | GO:0051861: glycolipid binding | 2.85E-04 |
| 14 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 2.85E-04 |
| 15 | GO:0004222: metalloendopeptidase activity | 3.85E-04 |
| 16 | GO:0043022: ribosome binding | 7.22E-04 |
| 17 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 8.20E-04 |
| 18 | GO:0003747: translation release factor activity | 9.20E-04 |
| 19 | GO:0005381: iron ion transmembrane transporter activity | 1.02E-03 |
| 20 | GO:0016844: strictosidine synthase activity | 1.02E-03 |
| 21 | GO:0004177: aminopeptidase activity | 1.24E-03 |
| 22 | GO:0044183: protein binding involved in protein folding | 1.24E-03 |
| 23 | GO:0004407: histone deacetylase activity | 1.99E-03 |
| 24 | GO:0043424: protein histidine kinase binding | 2.12E-03 |
| 25 | GO:0004176: ATP-dependent peptidase activity | 2.26E-03 |
| 26 | GO:0050662: coenzyme binding | 3.31E-03 |
| 27 | GO:0048038: quinone binding | 3.63E-03 |
| 28 | GO:0004518: nuclease activity | 3.80E-03 |
| 29 | GO:0008237: metallopeptidase activity | 4.32E-03 |
| 30 | GO:0004672: protein kinase activity | 4.91E-03 |
| 31 | GO:0043621: protein self-association | 8.31E-03 |
| 32 | GO:0005198: structural molecule activity | 8.53E-03 |
| 33 | GO:0003723: RNA binding | 1.10E-02 |
| 34 | GO:0051082: unfolded protein binding | 1.24E-02 |
| 35 | GO:0015144: carbohydrate transmembrane transporter activity | 1.65E-02 |
| 36 | GO:0005351: sugar:proton symporter activity | 1.80E-02 |
| 37 | GO:0003824: catalytic activity | 1.95E-02 |
| 38 | GO:0005215: transporter activity | 1.97E-02 |
| 39 | GO:0016491: oxidoreductase activity | 2.34E-02 |
| 40 | GO:0008168: methyltransferase activity | 2.43E-02 |
| 41 | GO:0016788: hydrolase activity, acting on ester bonds | 2.53E-02 |
| 42 | GO:0008233: peptidase activity | 2.87E-02 |
| 43 | GO:0004519: endonuclease activity | 4.08E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009571: proplastid stroma | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.11E-13 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 2.36E-07 |
| 4 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.58E-05 |
| 5 | GO:0009534: chloroplast thylakoid | 1.87E-05 |
| 6 | GO:0009941: chloroplast envelope | 1.16E-03 |
| 7 | GO:0010287: plastoglobule | 1.23E-03 |
| 8 | GO:0009570: chloroplast stroma | 8.47E-03 |
| 9 | GO:0009579: thylakoid | 1.05E-02 |
| 10 | GO:0009706: chloroplast inner membrane | 1.24E-02 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 1.46E-02 |
| 12 | GO:0016021: integral component of membrane | 1.83E-02 |
| 13 | GO:0009536: plastid | 2.18E-02 |
| 14 | GO:0031969: chloroplast membrane | 2.91E-02 |