co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G78450

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0033481: galacturonate biosynthetic process	1.30E-05
2	GO:0019388: galactose catabolic process	3.42E-05
3	GO:0007154: cell communication	3.42E-05
4	GO:1900111: positive regulation of histone H3-K9 dimethylation	3.42E-05
5	GO:0048587: regulation of short-day photoperiodism, flowering	3.42E-05
6	GO:0032922: circadian regulation of gene expression	6.16E-05
7	GO:0033014: tetrapyrrole biosynthetic process	9.36E-05
8	GO:0009590: detection of gravity	9.36E-05
9	GO:0010236: plastoquinone biosynthetic process	1.68E-04
10	GO:1902183: regulation of shoot apical meristem development	1.68E-04
11	GO:0050829: defense response to Gram-negative bacterium	2.99E-04
12	GO:0006955: immune response	2.99E-04
13	GO:0005978: glycogen biosynthetic process	3.46E-04
14	GO:0016559: peroxisome fission	3.46E-04
15	GO:0048193: Golgi vesicle transport	3.94E-04
16	GO:2000024: regulation of leaf development	4.45E-04
17	GO:0006783: heme biosynthetic process	4.45E-04
18	GO:0006779: porphyrin-containing compound biosynthetic process	4.96E-04
19	GO:0048229: gametophyte development	6.03E-04
20	GO:0006006: glucose metabolic process	7.14E-04
21	GO:0009225: nucleotide-sugar metabolic process	8.32E-04
22	GO:0007031: peroxisome organization	8.32E-04
23	GO:0009944: polarity specification of adaxial/abaxial axis	9.51E-04
24	GO:0016998: cell wall macromolecule catabolic process	1.08E-03
25	GO:0048653: anther development	1.41E-03
26	GO:0019252: starch biosynthetic process	1.63E-03
27	GO:0048510: regulation of timing of transition from vegetative to reproductive phase	1.70E-03
28	GO:0006635: fatty acid beta-oxidation	1.70E-03
29	GO:0010583: response to cyclopentenone	1.78E-03
30	GO:0048481: plant ovule development	2.61E-03
31	GO:0009416: response to light stimulus	2.82E-03
32	GO:0009744: response to sucrose	3.63E-03
33	GO:0048316: seed development	5.09E-03
34	GO:0009742: brassinosteroid mediated signaling pathway	5.89E-03
35	GO:0009409: response to cold	7.68E-03
36	GO:0040008: regulation of growth	8.00E-03
37	GO:0010228: vegetative to reproductive phase transition of meristem	8.53E-03
38	GO:0005975: carbohydrate metabolic process	8.61E-03
39	GO:0080167: response to karrikin	1.31E-02
40	GO:0046777: protein autophosphorylation	1.37E-02
41	GO:0016310: phosphorylation	1.40E-02
42	GO:0045892: negative regulation of transcription, DNA-templated	1.50E-02
43	GO:0016042: lipid catabolic process	1.69E-02
44	GO:0008152: metabolic process	1.85E-02
45	GO:0009734: auxin-activated signaling pathway	2.20E-02
46	GO:0006355: regulation of transcription, DNA-templated	2.23E-02
47	GO:0009908: flower development	2.41E-02
48	GO:0009735: response to cytokinin	2.43E-02
49	GO:0006952: defense response	3.17E-02
50	GO:0006351: transcription, DNA-templated	3.63E-02
51	GO:0071555: cell wall organization	4.29E-02
52	GO:0006468: protein phosphorylation	4.40E-02
53	GO:0030154: cell differentiation	4.55E-02
54	GO:0009733: response to auxin	4.65E-02

Rank	GO Term	Adjusted P value
1	GO:0042834: peptidoglycan binding	1.30E-05
2	GO:0004325: ferrochelatase activity	1.30E-05
3	GO:0004614: phosphoglucomutase activity	3.42E-05
4	GO:0016868: intramolecular transferase activity, phosphotransferases	3.42E-05
5	GO:0050378: UDP-glucuronate 4-epimerase activity	1.30E-04
6	GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity	2.10E-04
7	GO:0035064: methylated histone binding	3.46E-04
8	GO:0042802: identical protein binding	7.52E-04
9	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	7.72E-04
10	GO:0001085: RNA polymerase II transcription factor binding	1.48E-03
11	GO:0016597: amino acid binding	2.10E-03
12	GO:0030247: polysaccharide binding	2.43E-03
13	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	2.87E-03
14	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.05E-03
15	GO:0005198: structural molecule activity	3.93E-03
16	GO:0022857: transmembrane transporter activity	5.43E-03
17	GO:0044212: transcription regulatory region DNA binding	5.68E-03
18	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	7.23E-03
19	GO:0003700: transcription factor activity, sequence-specific DNA binding	1.05E-02
20	GO:0000287: magnesium ion binding	1.11E-02
21	GO:0016788: hydrolase activity, acting on ester bonds	1.14E-02
22	GO:0003682: chromatin binding	1.17E-02
23	GO:0005515: protein binding	1.20E-02
24	GO:0052689: carboxylic ester hydrolase activity	1.40E-02
25	GO:0046872: metal ion binding	1.93E-02
26	GO:0016301: kinase activity	2.50E-02
27	GO:0004674: protein serine/threonine kinase activity	2.81E-02
28	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	3.16E-02
29	GO:0003677: DNA binding	4.38E-02
30	GO:0003824: catalytic activity	4.58E-02

Rank	GO Term	Adjusted P value
1	GO:0046658: anchored component of plasma membrane	4.31E-05
2	GO:0031519: PcG protein complex	6.16E-05
3	GO:0010319: stromule	6.90E-05
4	GO:0055035: plastid thylakoid membrane	1.68E-04
5	GO:0005779: integral component of peroxisomal membrane	3.94E-04
6	GO:0005677: chromatin silencing complex	3.94E-04
7	GO:0031225: anchored component of membrane	5.20E-04
8	GO:0009505: plant-type cell wall	9.48E-04
9	GO:0032580: Golgi cisterna membrane	1.94E-03
10	GO:0005778: peroxisomal membrane	2.02E-03
11	GO:0005667: transcription factor complex	2.35E-03
12	GO:0009506: plasmodesma	4.16E-03
13	GO:0009570: chloroplast stroma	7.58E-03
14	GO:0005886: plasma membrane	1.01E-02
15	GO:0009535: chloroplast thylakoid membrane	1.27E-02
16	GO:0031969: chloroplast membrane	1.31E-02
17	GO:0005794: Golgi apparatus	2.71E-02
18	GO:0005777: peroxisome	2.86E-02
19	GO:0005802: trans-Golgi network	3.63E-02
20	GO:0005768: endosome	3.97E-02