GO Enrichment Analysis of Co-expressed Genes with
AT1G77590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006223: uracil salvage | 0.00E+00 |
| 2 | GO:0010394: homogalacturonan metabolic process | 0.00E+00 |
| 3 | GO:1905499: trichome papilla formation | 0.00E+00 |
| 4 | GO:0006437: tyrosyl-tRNA aminoacylation | 0.00E+00 |
| 5 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 6 | GO:0080094: response to trehalose-6-phosphate | 0.00E+00 |
| 7 | GO:0006428: isoleucyl-tRNA aminoacylation | 0.00E+00 |
| 8 | GO:0006642: triglyceride mobilization | 0.00E+00 |
| 9 | GO:0006633: fatty acid biosynthetic process | 1.76E-08 |
| 10 | GO:0032544: plastid translation | 1.06E-06 |
| 11 | GO:0051085: chaperone mediated protein folding requiring cofactor | 5.94E-06 |
| 12 | GO:0006085: acetyl-CoA biosynthetic process | 1.12E-05 |
| 13 | GO:0006418: tRNA aminoacylation for protein translation | 1.53E-05 |
| 14 | GO:0046166: glyceraldehyde-3-phosphate biosynthetic process | 1.14E-04 |
| 15 | GO:0006169: adenosine salvage | 1.14E-04 |
| 16 | GO:0010442: guard cell morphogenesis | 1.14E-04 |
| 17 | GO:0045488: pectin metabolic process | 1.14E-04 |
| 18 | GO:0006436: tryptophanyl-tRNA aminoacylation | 1.14E-04 |
| 19 | GO:0060627: regulation of vesicle-mediated transport | 1.14E-04 |
| 20 | GO:0071258: cellular response to gravity | 2.65E-04 |
| 21 | GO:0015774: polysaccharide transport | 2.65E-04 |
| 22 | GO:0043039: tRNA aminoacylation | 2.65E-04 |
| 23 | GO:0052541: plant-type cell wall cellulose metabolic process | 2.65E-04 |
| 24 | GO:0006695: cholesterol biosynthetic process | 2.65E-04 |
| 25 | GO:0010025: wax biosynthetic process | 3.44E-04 |
| 26 | GO:0042254: ribosome biogenesis | 3.61E-04 |
| 27 | GO:0007017: microtubule-based process | 4.22E-04 |
| 28 | GO:0019563: glycerol catabolic process | 4.38E-04 |
| 29 | GO:0010253: UDP-rhamnose biosynthetic process | 4.38E-04 |
| 30 | GO:0045793: positive regulation of cell size | 4.38E-04 |
| 31 | GO:0032504: multicellular organism reproduction | 4.38E-04 |
| 32 | GO:0006096: glycolytic process | 5.25E-04 |
| 33 | GO:0009411: response to UV | 5.51E-04 |
| 34 | GO:0006165: nucleoside diphosphate phosphorylation | 6.29E-04 |
| 35 | GO:0006228: UTP biosynthetic process | 6.29E-04 |
| 36 | GO:0010088: phloem development | 6.29E-04 |
| 37 | GO:0006986: response to unfolded protein | 6.29E-04 |
| 38 | GO:0055070: copper ion homeostasis | 6.29E-04 |
| 39 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 6.29E-04 |
| 40 | GO:0006241: CTP biosynthetic process | 6.29E-04 |
| 41 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 6.29E-04 |
| 42 | GO:0000413: protein peptidyl-prolyl isomerization | 6.98E-04 |
| 43 | GO:0044206: UMP salvage | 8.35E-04 |
| 44 | GO:0009956: radial pattern formation | 8.35E-04 |
| 45 | GO:0006183: GTP biosynthetic process | 8.35E-04 |
| 46 | GO:0006412: translation | 8.86E-04 |
| 47 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.05E-03 |
| 48 | GO:0043097: pyrimidine nucleoside salvage | 1.05E-03 |
| 49 | GO:0010236: plastoquinone biosynthetic process | 1.05E-03 |
| 50 | GO:0044209: AMP salvage | 1.05E-03 |
| 51 | GO:0006665: sphingolipid metabolic process | 1.05E-03 |
| 52 | GO:0006206: pyrimidine nucleobase metabolic process | 1.29E-03 |
| 53 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.29E-03 |
| 54 | GO:0006555: methionine metabolic process | 1.29E-03 |
| 55 | GO:0015995: chlorophyll biosynthetic process | 1.53E-03 |
| 56 | GO:1901259: chloroplast rRNA processing | 1.54E-03 |
| 57 | GO:0017148: negative regulation of translation | 1.54E-03 |
| 58 | GO:0006694: steroid biosynthetic process | 1.54E-03 |
| 59 | GO:0010189: vitamin E biosynthetic process | 1.54E-03 |
| 60 | GO:0010555: response to mannitol | 1.54E-03 |
| 61 | GO:0009955: adaxial/abaxial pattern specification | 1.54E-03 |
| 62 | GO:0042026: protein refolding | 1.54E-03 |
| 63 | GO:0048481: plant ovule development | 1.69E-03 |
| 64 | GO:0045995: regulation of embryonic development | 1.81E-03 |
| 65 | GO:0009735: response to cytokinin | 1.83E-03 |
| 66 | GO:0055114: oxidation-reduction process | 1.90E-03 |
| 67 | GO:0007568: aging | 1.95E-03 |
| 68 | GO:0006875: cellular metal ion homeostasis | 2.09E-03 |
| 69 | GO:0009642: response to light intensity | 2.09E-03 |
| 70 | GO:0006526: arginine biosynthetic process | 2.39E-03 |
| 71 | GO:0009808: lignin metabolic process | 2.39E-03 |
| 72 | GO:0009409: response to cold | 2.47E-03 |
| 73 | GO:0033384: geranyl diphosphate biosynthetic process | 2.70E-03 |
| 74 | GO:0048589: developmental growth | 2.70E-03 |
| 75 | GO:0015780: nucleotide-sugar transport | 2.70E-03 |
| 76 | GO:0045337: farnesyl diphosphate biosynthetic process | 2.70E-03 |
| 77 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.02E-03 |
| 78 | GO:0035999: tetrahydrofolate interconversion | 3.02E-03 |
| 79 | GO:0006457: protein folding | 3.10E-03 |
| 80 | GO:0046686: response to cadmium ion | 3.16E-03 |
| 81 | GO:0045036: protein targeting to chloroplast | 3.36E-03 |
| 82 | GO:0010192: mucilage biosynthetic process | 3.36E-03 |
| 83 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.71E-03 |
| 84 | GO:0010015: root morphogenesis | 3.71E-03 |
| 85 | GO:0045454: cell redox homeostasis | 3.72E-03 |
| 86 | GO:0045037: protein import into chloroplast stroma | 4.06E-03 |
| 87 | GO:0006094: gluconeogenesis | 4.43E-03 |
| 88 | GO:0009933: meristem structural organization | 4.81E-03 |
| 89 | GO:0019253: reductive pentose-phosphate cycle | 4.81E-03 |
| 90 | GO:0010020: chloroplast fission | 4.81E-03 |
| 91 | GO:0006629: lipid metabolic process | 4.85E-03 |
| 92 | GO:0046688: response to copper ion | 5.21E-03 |
| 93 | GO:0006071: glycerol metabolic process | 5.61E-03 |
| 94 | GO:0007010: cytoskeleton organization | 6.03E-03 |
| 95 | GO:0019344: cysteine biosynthetic process | 6.03E-03 |
| 96 | GO:0009116: nucleoside metabolic process | 6.03E-03 |
| 97 | GO:0042742: defense response to bacterium | 6.11E-03 |
| 98 | GO:0008299: isoprenoid biosynthetic process | 6.45E-03 |
| 99 | GO:0010026: trichome differentiation | 6.45E-03 |
| 100 | GO:0006730: one-carbon metabolic process | 7.34E-03 |
| 101 | GO:0007005: mitochondrion organization | 7.34E-03 |
| 102 | GO:0040007: growth | 7.79E-03 |
| 103 | GO:0019722: calcium-mediated signaling | 8.26E-03 |
| 104 | GO:0010091: trichome branching | 8.26E-03 |
| 105 | GO:0010214: seed coat development | 8.26E-03 |
| 106 | GO:0016117: carotenoid biosynthetic process | 8.74E-03 |
| 107 | GO:0045490: pectin catabolic process | 9.00E-03 |
| 108 | GO:0042335: cuticle development | 9.23E-03 |
| 109 | GO:0080022: primary root development | 9.23E-03 |
| 110 | GO:0010305: leaf vascular tissue pattern formation | 9.73E-03 |
| 111 | GO:0006520: cellular amino acid metabolic process | 9.73E-03 |
| 112 | GO:0045489: pectin biosynthetic process | 9.73E-03 |
| 113 | GO:0007018: microtubule-based movement | 1.02E-02 |
| 114 | GO:0019252: starch biosynthetic process | 1.08E-02 |
| 115 | GO:0016132: brassinosteroid biosynthetic process | 1.13E-02 |
| 116 | GO:0071554: cell wall organization or biogenesis | 1.13E-02 |
| 117 | GO:0016032: viral process | 1.18E-02 |
| 118 | GO:0032502: developmental process | 1.18E-02 |
| 119 | GO:0007267: cell-cell signaling | 1.35E-02 |
| 120 | GO:0009911: positive regulation of flower development | 1.46E-02 |
| 121 | GO:0009627: systemic acquired resistance | 1.58E-02 |
| 122 | GO:0008219: cell death | 1.77E-02 |
| 123 | GO:0009817: defense response to fungus, incompatible interaction | 1.77E-02 |
| 124 | GO:0048767: root hair elongation | 1.83E-02 |
| 125 | GO:0009834: plant-type secondary cell wall biogenesis | 1.89E-02 |
| 126 | GO:0006839: mitochondrial transport | 2.29E-02 |
| 127 | GO:0042542: response to hydrogen peroxide | 2.43E-02 |
| 128 | GO:0051707: response to other organism | 2.50E-02 |
| 129 | GO:0008643: carbohydrate transport | 2.65E-02 |
| 130 | GO:0008152: metabolic process | 2.83E-02 |
| 131 | GO:0042538: hyperosmotic salinity response | 2.94E-02 |
| 132 | GO:0009585: red, far-red light phototransduction | 3.09E-02 |
| 133 | GO:0042545: cell wall modification | 3.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 2 | GO:0004822: isoleucine-tRNA ligase activity | 0.00E+00 |
| 3 | GO:0019166: trans-2-enoyl-CoA reductase (NADPH) activity | 0.00E+00 |
| 4 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 5 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 6 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 7 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 8 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 9 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 10 | GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity | 0.00E+00 |
| 11 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 12 | GO:0019843: rRNA binding | 2.42E-07 |
| 13 | GO:0051920: peroxiredoxin activity | 2.82E-07 |
| 14 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 6.64E-07 |
| 15 | GO:0016209: antioxidant activity | 7.15E-07 |
| 16 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 2.51E-06 |
| 17 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 5.94E-06 |
| 18 | GO:0003878: ATP citrate synthase activity | 5.94E-06 |
| 19 | GO:0004812: aminoacyl-tRNA ligase activity | 3.17E-05 |
| 20 | GO:0005200: structural constituent of cytoskeleton | 8.30E-05 |
| 21 | GO:0010490: UDP-4-keto-rhamnose-4-keto-reductase activity | 1.14E-04 |
| 22 | GO:0004001: adenosine kinase activity | 1.14E-04 |
| 23 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.14E-04 |
| 24 | GO:0004489: methylenetetrahydrofolate reductase (NAD(P)H) activity | 1.14E-04 |
| 25 | GO:0015088: copper uptake transmembrane transporter activity | 1.14E-04 |
| 26 | GO:0004830: tryptophan-tRNA ligase activity | 1.14E-04 |
| 27 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.14E-04 |
| 28 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.14E-04 |
| 29 | GO:0010489: UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity | 1.14E-04 |
| 30 | GO:0004560: alpha-L-fucosidase activity | 1.14E-04 |
| 31 | GO:0004807: triose-phosphate isomerase activity | 1.14E-04 |
| 32 | GO:0004831: tyrosine-tRNA ligase activity | 1.14E-04 |
| 33 | GO:0005507: copper ion binding | 1.51E-04 |
| 34 | GO:0050377: UDP-glucose 4,6-dehydratase activity | 2.65E-04 |
| 35 | GO:0008460: dTDP-glucose 4,6-dehydratase activity | 2.65E-04 |
| 36 | GO:0010280: UDP-L-rhamnose synthase activity | 2.65E-04 |
| 37 | GO:0004312: fatty acid synthase activity | 2.65E-04 |
| 38 | GO:0003735: structural constituent of ribosome | 3.34E-04 |
| 39 | GO:0004148: dihydrolipoyl dehydrogenase activity | 4.38E-04 |
| 40 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 4.38E-04 |
| 41 | GO:0002161: aminoacyl-tRNA editing activity | 4.38E-04 |
| 42 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 6.29E-04 |
| 43 | GO:0004550: nucleoside diphosphate kinase activity | 6.29E-04 |
| 44 | GO:0004845: uracil phosphoribosyltransferase activity | 8.35E-04 |
| 45 | GO:0016836: hydro-lyase activity | 8.35E-04 |
| 46 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 8.35E-04 |
| 47 | GO:0009922: fatty acid elongase activity | 1.05E-03 |
| 48 | GO:0004017: adenylate kinase activity | 1.54E-03 |
| 49 | GO:0004849: uridine kinase activity | 1.54E-03 |
| 50 | GO:0016831: carboxy-lyase activity | 1.81E-03 |
| 51 | GO:0005544: calcium-dependent phospholipid binding | 2.09E-03 |
| 52 | GO:0003746: translation elongation factor activity | 2.13E-03 |
| 53 | GO:0004601: peroxidase activity | 2.26E-03 |
| 54 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 2.70E-03 |
| 55 | GO:0004337: geranyltranstransferase activity | 2.70E-03 |
| 56 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 2.70E-03 |
| 57 | GO:0043621: protein self-association | 2.96E-03 |
| 58 | GO:0005381: iron ion transmembrane transporter activity | 3.02E-03 |
| 59 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.19E-03 |
| 60 | GO:0044183: protein binding involved in protein folding | 3.71E-03 |
| 61 | GO:0004161: dimethylallyltranstransferase activity | 3.71E-03 |
| 62 | GO:0042803: protein homodimerization activity | 3.95E-03 |
| 63 | GO:0000049: tRNA binding | 4.06E-03 |
| 64 | GO:0030599: pectinesterase activity | 4.91E-03 |
| 65 | GO:0051082: unfolded protein binding | 5.21E-03 |
| 66 | GO:0051087: chaperone binding | 6.45E-03 |
| 67 | GO:0016829: lyase activity | 7.06E-03 |
| 68 | GO:0030570: pectate lyase activity | 7.79E-03 |
| 69 | GO:0008514: organic anion transmembrane transporter activity | 8.26E-03 |
| 70 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 1.35E-02 |
| 71 | GO:0016413: O-acetyltransferase activity | 1.40E-02 |
| 72 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 1.70E-02 |
| 73 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.77E-02 |
| 74 | GO:0005525: GTP binding | 1.89E-02 |
| 75 | GO:0052689: carboxylic ester hydrolase activity | 1.92E-02 |
| 76 | GO:0030145: manganese ion binding | 1.96E-02 |
| 77 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.96E-02 |
| 78 | GO:0003924: GTPase activity | 2.56E-02 |
| 79 | GO:0009055: electron carrier activity | 2.75E-02 |
| 80 | GO:0051287: NAD binding | 2.87E-02 |
| 81 | GO:0045330: aspartyl esterase activity | 3.33E-02 |
| 82 | GO:0003777: microtubule motor activity | 3.33E-02 |
| 83 | GO:0016491: oxidoreductase activity | 3.45E-02 |
| 84 | GO:0045735: nutrient reservoir activity | 3.49E-02 |
| 85 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 3.57E-02 |
| 86 | GO:0004650: polygalacturonase activity | 3.73E-02 |
| 87 | GO:0003729: mRNA binding | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005835: fatty acid synthase complex | 0.00E+00 |
| 2 | GO:0009570: chloroplast stroma | 2.82E-31 |
| 3 | GO:0009941: chloroplast envelope | 1.01E-23 |
| 4 | GO:0009507: chloroplast | 5.12E-22 |
| 5 | GO:0009579: thylakoid | 7.09E-16 |
| 6 | GO:0048046: apoplast | 2.99E-08 |
| 7 | GO:0009534: chloroplast thylakoid | 7.25E-08 |
| 8 | GO:0009346: citrate lyase complex | 5.94E-06 |
| 9 | GO:0005840: ribosome | 8.22E-06 |
| 10 | GO:0031977: thylakoid lumen | 1.51E-05 |
| 11 | GO:0010319: stromule | 8.30E-05 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 9.69E-05 |
| 13 | GO:0045298: tubulin complex | 1.08E-04 |
| 14 | GO:0009923: fatty acid elongase complex | 1.14E-04 |
| 15 | GO:0046658: anchored component of plasma membrane | 2.72E-04 |
| 16 | GO:0022626: cytosolic ribosome | 3.88E-04 |
| 17 | GO:0005618: cell wall | 4.56E-04 |
| 18 | GO:0009505: plant-type cell wall | 5.23E-04 |
| 19 | GO:0031897: Tic complex | 8.35E-04 |
| 20 | GO:0009543: chloroplast thylakoid lumen | 8.76E-04 |
| 21 | GO:0016020: membrane | 9.07E-04 |
| 22 | GO:0055035: plastid thylakoid membrane | 1.05E-03 |
| 23 | GO:0005829: cytosol | 1.29E-03 |
| 24 | GO:0009986: cell surface | 1.81E-03 |
| 25 | GO:0009539: photosystem II reaction center | 2.39E-03 |
| 26 | GO:0005763: mitochondrial small ribosomal subunit | 2.70E-03 |
| 27 | GO:0000311: plastid large ribosomal subunit | 4.06E-03 |
| 28 | GO:0031225: anchored component of membrane | 4.11E-03 |
| 29 | GO:0000312: plastid small ribosomal subunit | 4.81E-03 |
| 30 | GO:0009706: chloroplast inner membrane | 5.21E-03 |
| 31 | GO:0005875: microtubule associated complex | 5.61E-03 |
| 32 | GO:0009654: photosystem II oxygen evolving complex | 6.45E-03 |
| 33 | GO:0009506: plasmodesma | 8.02E-03 |
| 34 | GO:0005759: mitochondrial matrix | 8.20E-03 |
| 35 | GO:0009536: plastid | 8.32E-03 |
| 36 | GO:0005871: kinesin complex | 8.74E-03 |
| 37 | GO:0009707: chloroplast outer membrane | 1.77E-02 |
| 38 | GO:0005802: trans-Golgi network | 1.83E-02 |
| 39 | GO:0015934: large ribosomal subunit | 1.96E-02 |
| 40 | GO:0005768: endosome | 2.15E-02 |
| 41 | GO:0005856: cytoskeleton | 2.72E-02 |
| 42 | GO:0005774: vacuolar membrane | 3.90E-02 |
| 43 | GO:0005886: plasma membrane | 4.58E-02 |
| 44 | GO:0005623: cell | 4.75E-02 |