co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G76960

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0001881: receptor recycling	0.00E+00
2	GO:0072722: response to amitrole	0.00E+00
3	GO:0039694: viral RNA genome replication	0.00E+00
4	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
5	GO:0002376: immune system process	0.00E+00
6	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
7	GO:0007141: male meiosis I	0.00E+00
8	GO:0010360: negative regulation of anion channel activity	0.00E+00
9	GO:0030149: sphingolipid catabolic process	0.00E+00
10	GO:0048227: plasma membrane to endosome transport	0.00E+00
11	GO:0010398: xylogalacturonan metabolic process	0.00E+00
12	GO:0010150: leaf senescence	1.06E-04
13	GO:0046686: response to cadmium ion	1.12E-04
14	GO:0009819: drought recovery	1.88E-04
15	GO:0000302: response to reactive oxygen species	2.10E-04
16	GO:0048508: embryonic meristem development	2.18E-04
17	GO:0006805: xenobiotic metabolic process	2.18E-04
18	GO:1902361: mitochondrial pyruvate transmembrane transport	2.18E-04
19	GO:0030968: endoplasmic reticulum unfolded protein response	2.33E-04
20	GO:0046685: response to arsenic-containing substance	2.82E-04
21	GO:0000103: sulfate assimilation	3.94E-04
22	GO:0031648: protein destabilization	4.86E-04
23	GO:0015914: phospholipid transport	4.86E-04
24	GO:0051262: protein tetramerization	4.86E-04
25	GO:0006212: uracil catabolic process	4.86E-04
26	GO:0009945: radial axis specification	4.86E-04
27	GO:0019483: beta-alanine biosynthetic process	4.86E-04
28	GO:0006850: mitochondrial pyruvate transport	4.86E-04
29	GO:0019752: carboxylic acid metabolic process	4.86E-04
30	GO:1902000: homogentisate catabolic process	4.86E-04
31	GO:0015706: nitrate transport	5.22E-04
32	GO:0045454: cell redox homeostasis	5.31E-04
33	GO:0009407: toxin catabolic process	5.54E-04
34	GO:0042742: defense response to bacterium	5.71E-04
35	GO:0007034: vacuolar transport	6.66E-04
36	GO:0009410: response to xenobiotic stimulus	7.90E-04
37	GO:0010272: response to silver ion	7.90E-04
38	GO:0009072: aromatic amino acid family metabolic process	7.90E-04
39	GO:0008333: endosome to lysosome transport	7.90E-04
40	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	7.90E-04
41	GO:0010359: regulation of anion channel activity	7.90E-04
42	GO:0061158: 3'-UTR-mediated mRNA destabilization	7.90E-04
43	GO:0080055: low-affinity nitrate transport	7.90E-04
44	GO:0010288: response to lead ion	7.90E-04
45	GO:0051176: positive regulation of sulfur metabolic process	7.90E-04
46	GO:0034976: response to endoplasmic reticulum stress	8.29E-04
47	GO:0000187: activation of MAPK activity	1.13E-03
48	GO:0048194: Golgi vesicle budding	1.13E-03
49	GO:0072583: clathrin-dependent endocytosis	1.13E-03
50	GO:0006986: response to unfolded protein	1.13E-03
51	GO:0001676: long-chain fatty acid metabolic process	1.13E-03
52	GO:0009814: defense response, incompatible interaction	1.20E-03
53	GO:0010227: floral organ abscission	1.31E-03
54	GO:2000038: regulation of stomatal complex development	1.50E-03
55	GO:0010188: response to microbial phytotoxin	1.50E-03
56	GO:0006662: glycerol ether metabolic process	1.78E-03
57	GO:0098719: sodium ion import across plasma membrane	1.91E-03
58	GO:0006564: L-serine biosynthetic process	1.91E-03
59	GO:0006623: protein targeting to vacuole	2.06E-03
60	GO:0010405: arabinogalactan protein metabolic process	2.35E-03
61	GO:0006751: glutathione catabolic process	2.35E-03
62	GO:0048232: male gamete generation	2.35E-03
63	GO:0070814: hydrogen sulfide biosynthetic process	2.35E-03
64	GO:1902456: regulation of stomatal opening	2.35E-03
65	GO:1900425: negative regulation of defense response to bacterium	2.35E-03
66	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.35E-03
67	GO:0035435: phosphate ion transmembrane transport	2.35E-03
68	GO:2000037: regulation of stomatal complex patterning	2.83E-03
69	GO:0015977: carbon fixation	2.83E-03
70	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.83E-03
71	GO:0009942: longitudinal axis specification	2.83E-03
72	GO:0009615: response to virus	3.17E-03
73	GO:0050790: regulation of catalytic activity	3.33E-03
74	GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway	3.33E-03
75	GO:0043090: amino acid import	3.33E-03
76	GO:1900056: negative regulation of leaf senescence	3.33E-03
77	GO:0007205: protein kinase C-activating G-protein coupled receptor signaling pathway	3.33E-03
78	GO:0070370: cellular heat acclimation	3.33E-03
79	GO:0042128: nitrate assimilation	3.53E-03
80	GO:2000070: regulation of response to water deprivation	3.86E-03
81	GO:0043562: cellular response to nitrogen levels	4.42E-03
82	GO:0006002: fructose 6-phosphate metabolic process	4.42E-03
83	GO:0006075: (1->3)-beta-D-glucan biosynthetic process	4.42E-03
84	GO:0010043: response to zinc ion	4.76E-03
85	GO:0006470: protein dephosphorylation	4.86E-03
86	GO:0009821: alkaloid biosynthetic process	5.00E-03
87	GO:0090333: regulation of stomatal closure	5.00E-03
88	GO:0034599: cellular response to oxidative stress	5.46E-03
89	GO:0051453: regulation of intracellular pH	5.62E-03
90	GO:0043067: regulation of programmed cell death	5.62E-03
91	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.62E-03
92	GO:0010629: negative regulation of gene expression	6.25E-03
93	GO:0006995: cellular response to nitrogen starvation	6.25E-03
94	GO:0051026: chiasma assembly	6.25E-03
95	GO:0006032: chitin catabolic process	6.25E-03
96	GO:0072593: reactive oxygen species metabolic process	6.91E-03
97	GO:0000272: polysaccharide catabolic process	6.91E-03
98	GO:0016485: protein processing	6.91E-03
99	GO:0009636: response to toxic substance	7.56E-03
100	GO:0009651: response to salt stress	7.98E-03
101	GO:0010229: inflorescence development	8.30E-03
102	GO:0010102: lateral root morphogenesis	8.30E-03
103	GO:0034605: cellular response to heat	9.03E-03
104	GO:0010053: root epidermal cell differentiation	9.79E-03
105	GO:0010167: response to nitrate	9.79E-03
106	GO:0010200: response to chitin	9.82E-03
107	GO:0046777: protein autophosphorylation	1.02E-02
108	GO:0015031: protein transport	1.09E-02
109	GO:2000377: regulation of reactive oxygen species metabolic process	1.14E-02
110	GO:0000027: ribosomal large subunit assembly	1.14E-02
111	GO:0009863: salicylic acid mediated signaling pathway	1.14E-02
112	GO:0006874: cellular calcium ion homeostasis	1.22E-02
113	GO:0006457: protein folding	1.24E-02
114	GO:0016998: cell wall macromolecule catabolic process	1.30E-02
115	GO:0031348: negative regulation of defense response	1.39E-02
116	GO:0080092: regulation of pollen tube growth	1.39E-02
117	GO:0016226: iron-sulfur cluster assembly	1.39E-02
118	GO:0007131: reciprocal meiotic recombination	1.39E-02
119	GO:0009625: response to insect	1.48E-02
120	GO:0006012: galactose metabolic process	1.48E-02
121	GO:0001944: vasculature development	1.48E-02
122	GO:0009408: response to heat	1.54E-02
123	GO:0010091: trichome branching	1.57E-02
124	GO:0055114: oxidation-reduction process	1.58E-02
125	GO:0042147: retrograde transport, endosome to Golgi	1.66E-02
126	GO:0042631: cellular response to water deprivation	1.75E-02
127	GO:0010501: RNA secondary structure unwinding	1.75E-02
128	GO:0045489: pectin biosynthetic process	1.85E-02
129	GO:0008360: regulation of cell shape	1.85E-02
130	GO:0006520: cellular amino acid metabolic process	1.85E-02
131	GO:0009790: embryo development	1.90E-02
132	GO:0006814: sodium ion transport	1.95E-02
133	GO:0009646: response to absence of light	1.95E-02
134	GO:0010183: pollen tube guidance	2.05E-02
135	GO:0071554: cell wall organization or biogenesis	2.15E-02
136	GO:0002229: defense response to oomycetes	2.15E-02
137	GO:0010193: response to ozone	2.15E-02
138	GO:0007264: small GTPase mediated signal transduction	2.25E-02
139	GO:0009414: response to water deprivation	2.33E-02
140	GO:0071555: cell wall organization	2.41E-02
141	GO:0006979: response to oxidative stress	2.44E-02
142	GO:0006310: DNA recombination	2.46E-02
143	GO:0071805: potassium ion transmembrane transport	2.57E-02
144	GO:0051607: defense response to virus	2.68E-02
145	GO:0001666: response to hypoxia	2.79E-02
146	GO:0009607: response to biotic stimulus	2.91E-02
147	GO:0009627: systemic acquired resistance	3.02E-02
148	GO:0009738: abscisic acid-activated signaling pathway	3.04E-02
149	GO:0009416: response to light stimulus	3.17E-02
150	GO:0008219: cell death	3.37E-02
151	GO:0006499: N-terminal protein myristoylation	3.62E-02
152	GO:0010119: regulation of stomatal movement	3.74E-02
153	GO:0006970: response to osmotic stress	3.74E-02
154	GO:0009860: pollen tube growth	3.74E-02
155	GO:0009409: response to cold	3.76E-02
156	GO:0045893: positive regulation of transcription, DNA-templated	3.76E-02
157	GO:0006865: amino acid transport	3.86E-02
158	GO:0009723: response to ethylene	4.01E-02
159	GO:0048366: leaf development	4.08E-02
160	GO:0006099: tricarboxylic acid cycle	4.12E-02
161	GO:0006468: protein phosphorylation	4.48E-02
162	GO:0006631: fatty acid metabolic process	4.51E-02
163	GO:0009926: auxin polar transport	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
2	GO:0016034: maleylacetoacetate isomerase activity	0.00E+00
3	GO:0015370: solute:sodium symporter activity	0.00E+00
4	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
5	GO:0050220: prostaglandin-E synthase activity	0.00E+00
6	GO:0004157: dihydropyrimidinase activity	0.00E+00
7	GO:0052692: raffinose alpha-galactosidase activity	8.14E-06
8	GO:0004557: alpha-galactosidase activity	8.14E-06
9	GO:0004364: glutathione transferase activity	9.39E-05
10	GO:0047134: protein-disulfide reductase activity	1.25E-04
11	GO:0043295: glutathione binding	1.47E-04
12	GO:0004791: thioredoxin-disulfide reductase activity	1.73E-04
13	GO:0032050: clathrin heavy chain binding	2.18E-04
14	GO:0010013: N-1-naphthylphthalamic acid binding	2.18E-04
15	GO:0070008: serine-type exopeptidase activity	2.18E-04
16	GO:0004591: oxoglutarate dehydrogenase (succinyl-transferring) activity	2.18E-04
17	GO:0032791: lead ion binding	4.86E-04
18	GO:0004617: phosphoglycerate dehydrogenase activity	4.86E-04
19	GO:0004722: protein serine/threonine phosphatase activity	6.26E-04
20	GO:0080054: low-affinity nitrate transmembrane transporter activity	7.90E-04
21	GO:0005093: Rab GDP-dissociation inhibitor activity	7.90E-04
22	GO:0008430: selenium binding	7.90E-04
23	GO:0050833: pyruvate transmembrane transporter activity	7.90E-04
24	GO:0008964: phosphoenolpyruvate carboxylase activity	7.90E-04
25	GO:0003840: gamma-glutamyltransferase activity	7.90E-04
26	GO:0036374: glutathione hydrolase activity	7.90E-04
27	GO:0004781: sulfate adenylyltransferase (ATP) activity	7.90E-04
28	GO:0015293: symporter activity	1.05E-03
29	GO:0031176: endo-1,4-beta-xylanase activity	1.13E-03
30	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	1.13E-03
31	GO:0000062: fatty-acyl-CoA binding	1.50E-03
32	GO:0004301: epoxide hydrolase activity	1.50E-03
33	GO:0015204: urea transmembrane transporter activity	1.50E-03
34	GO:0015035: protein disulfide oxidoreductase activity	2.13E-03
35	GO:0030976: thiamine pyrophosphate binding	2.35E-03
36	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.35E-03
37	GO:0031593: polyubiquitin binding	2.35E-03
38	GO:0035252: UDP-xylosyltransferase activity	2.35E-03
39	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.50E-03
40	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.82E-03
41	GO:0102391: decanoate--CoA ligase activity	2.83E-03
42	GO:0004012: phospholipid-translocating ATPase activity	2.83E-03
43	GO:0003978: UDP-glucose 4-epimerase activity	2.83E-03
44	GO:0004602: glutathione peroxidase activity	2.83E-03
45	GO:0004467: long-chain fatty acid-CoA ligase activity	3.33E-03
46	GO:0004143: diacylglycerol kinase activity	3.33E-03
47	GO:0016831: carboxy-lyase activity	3.33E-03
48	GO:0003872: 6-phosphofructokinase activity	3.33E-03
49	GO:0008320: protein transmembrane transporter activity	3.33E-03
50	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.86E-03
51	GO:0004708: MAP kinase kinase activity	3.86E-03
52	GO:0008135: translation factor activity, RNA binding	4.42E-03
53	GO:0003843: 1,3-beta-D-glucan synthase activity	4.42E-03
54	GO:0071949: FAD binding	5.00E-03
55	GO:0016844: strictosidine synthase activity	5.62E-03
56	GO:0015112: nitrate transmembrane transporter activity	5.62E-03
57	GO:0005524: ATP binding	5.77E-03
58	GO:0004568: chitinase activity	6.25E-03
59	GO:0008047: enzyme activator activity	6.25E-03
60	GO:0004713: protein tyrosine kinase activity	6.25E-03
61	GO:0001054: RNA polymerase I activity	6.91E-03
62	GO:0004177: aminopeptidase activity	6.91E-03
63	GO:0015386: potassium:proton antiporter activity	6.91E-03
64	GO:0008378: galactosyltransferase activity	7.60E-03
65	GO:0000175: 3'-5'-exoribonuclease activity	8.30E-03
66	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	8.30E-03
67	GO:0005315: inorganic phosphate transmembrane transporter activity	8.30E-03
68	GO:0004535: poly(A)-specific ribonuclease activity	9.03E-03
69	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	9.08E-03
70	GO:0004190: aspartic-type endopeptidase activity	9.79E-03
71	GO:0008061: chitin binding	9.79E-03
72	GO:0005217: intracellular ligand-gated ion channel activity	9.79E-03
73	GO:0004970: ionotropic glutamate receptor activity	9.79E-03
74	GO:0008408: 3'-5' exonuclease activity	1.30E-02
75	GO:0004540: ribonuclease activity	1.30E-02
76	GO:0030246: carbohydrate binding	1.31E-02
77	GO:0003727: single-stranded RNA binding	1.57E-02
78	GO:0003756: protein disulfide isomerase activity	1.57E-02
79	GO:0004674: protein serine/threonine kinase activity	1.80E-02
80	GO:0005515: protein binding	1.84E-02
81	GO:0008536: Ran GTPase binding	1.85E-02
82	GO:0005509: calcium ion binding	2.14E-02
83	GO:0004197: cysteine-type endopeptidase activity	2.25E-02
84	GO:0015385: sodium:proton antiporter activity	2.36E-02
85	GO:0016301: kinase activity	2.54E-02
86	GO:0016413: O-acetyltransferase activity	2.68E-02
87	GO:0016887: ATPase activity	2.68E-02
88	GO:0016597: amino acid binding	2.68E-02
89	GO:0051213: dioxygenase activity	2.79E-02
90	GO:0042802: identical protein binding	2.85E-02
91	GO:0009931: calcium-dependent protein serine/threonine kinase activity	3.02E-02
92	GO:0004683: calmodulin-dependent protein kinase activity	3.14E-02
93	GO:0004004: ATP-dependent RNA helicase activity	3.14E-02
94	GO:0008236: serine-type peptidase activity	3.25E-02
95	GO:0004601: peroxidase activity	3.47E-02
96	GO:0005096: GTPase activator activity	3.49E-02
97	GO:0050897: cobalt ion binding	3.74E-02
98	GO:0043531: ADP binding	3.80E-02
99	GO:0003746: translation elongation factor activity	3.99E-02
100	GO:0003697: single-stranded DNA binding	3.99E-02
101	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.99E-02
102	GO:0003993: acid phosphatase activity	4.12E-02
103	GO:0004712: protein serine/threonine/tyrosine kinase activity	4.25E-02
104	GO:0004497: monooxygenase activity	4.30E-02
105	GO:0043565: sequence-specific DNA binding	4.70E-02
106	GO:0046872: metal ion binding	4.99E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
3	GO:0005829: cytosol	1.80E-06
4	GO:0048046: apoplast	1.17E-04
5	GO:0030014: CCR4-NOT complex	2.18E-04
6	GO:0005783: endoplasmic reticulum	3.50E-04
7	GO:0005773: vacuole	4.18E-04
8	GO:0005789: endoplasmic reticulum membrane	4.25E-04
9	GO:0030134: ER to Golgi transport vesicle	4.86E-04
10	GO:0005782: peroxisomal matrix	7.90E-04
11	GO:0030139: endocytic vesicle	7.90E-04
12	GO:0031902: late endosome membrane	8.21E-04
13	GO:0016021: integral component of membrane	1.45E-03
14	GO:0005945: 6-phosphofructokinase complex	1.91E-03
15	GO:0005886: plasma membrane	2.01E-03
16	GO:0005771: multivesicular body	2.35E-03
17	GO:0030904: retromer complex	2.35E-03
18	GO:0005778: peroxisomal membrane	2.82E-03
19	GO:0005801: cis-Golgi network	2.83E-03
20	GO:0016272: prefoldin complex	2.83E-03
21	GO:0031305: integral component of mitochondrial inner membrane	3.86E-03
22	GO:0000326: protein storage vacuole	4.42E-03
23	GO:0009514: glyoxysome	4.42E-03
24	GO:0000148: 1,3-beta-D-glucan synthase complex	4.42E-03
25	GO:0005736: DNA-directed RNA polymerase I complex	5.00E-03
26	GO:0017119: Golgi transport complex	6.25E-03
27	GO:0030125: clathrin vesicle coat	6.25E-03
28	GO:0048471: perinuclear region of cytoplasm	6.91E-03
29	GO:0005764: lysosome	9.03E-03
30	GO:0005635: nuclear envelope	9.73E-03
31	GO:0043234: protein complex	1.06E-02
32	GO:0016020: membrane	1.31E-02
33	GO:0005794: Golgi apparatus	1.43E-02
34	GO:0000790: nuclear chromatin	1.66E-02
35	GO:0009504: cell plate	2.05E-02
36	GO:0005768: endosome	2.06E-02
37	GO:0032580: Golgi cisterna membrane	2.46E-02
38	GO:0005788: endoplasmic reticulum lumen	2.91E-02
39	GO:0009505: plant-type cell wall	3.36E-02
40	GO:0000139: Golgi membrane	3.76E-02
41	GO:0005819: spindle	4.25E-02