Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G73110

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0070125: mitochondrial translational elongation0.00E+00
2GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
3GO:0042407: cristae formation0.00E+00
4GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
5GO:0006223: uracil salvage0.00E+00
6GO:0097164: ammonium ion metabolic process0.00E+00
7GO:0015805: S-adenosyl-L-methionine transport0.00E+00
8GO:0099131: ATP hydrolysis coupled ion transmembrane transport0.00E+00
9GO:0015976: carbon utilization4.05E-05
10GO:0006546: glycine catabolic process4.05E-05
11GO:0042254: ribosome biogenesis5.02E-05
12GO:0032543: mitochondrial translation6.46E-05
13GO:0006633: fatty acid biosynthetic process1.18E-04
14GO:0016117: carotenoid biosynthetic process1.53E-04
15GO:0000481: maturation of 5S rRNA2.41E-04
16GO:0042547: cell wall modification involved in multidimensional cell growth2.41E-04
17GO:0042371: vitamin K biosynthetic process2.41E-04
18GO:1902458: positive regulation of stomatal opening2.41E-04
19GO:0034337: RNA folding2.41E-04
20GO:0010729: positive regulation of hydrogen peroxide biosynthetic process2.41E-04
21GO:0046520: sphingoid biosynthetic process2.41E-04
22GO:0010442: guard cell morphogenesis2.41E-04
23GO:0071370: cellular response to gibberellin stimulus2.41E-04
24GO:0048829: root cap development4.55E-04
25GO:0006529: asparagine biosynthetic process5.34E-04
26GO:1903426: regulation of reactive oxygen species biosynthetic process5.34E-04
27GO:0052541: plant-type cell wall cellulose metabolic process5.34E-04
28GO:0006423: cysteinyl-tRNA aminoacylation5.34E-04
29GO:0060919: auxin influx5.34E-04
30GO:0070981: L-asparagine biosynthetic process5.34E-04
31GO:0006412: translation6.24E-04
32GO:0006006: glucose metabolic process6.81E-04
33GO:0010207: photosystem II assembly7.67E-04
34GO:0006696: ergosterol biosynthetic process8.68E-04
35GO:2001295: malonyl-CoA biosynthetic process8.68E-04
36GO:0043617: cellular response to sucrose starvation8.68E-04
37GO:0006833: water transport9.50E-04
38GO:0006636: unsaturated fatty acid biosynthetic process9.50E-04
39GO:0055070: copper ion homeostasis1.24E-03
40GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.24E-03
41GO:0006424: glutamyl-tRNA aminoacylation1.24E-03
42GO:0003333: amino acid transmembrane transport1.27E-03
43GO:0010037: response to carbon dioxide1.65E-03
44GO:0006808: regulation of nitrogen utilization1.65E-03
45GO:0019464: glycine decarboxylation via glycine cleavage system1.65E-03
46GO:0009765: photosynthesis, light harvesting1.65E-03
47GO:2000122: negative regulation of stomatal complex development1.65E-03
48GO:0044206: UMP salvage1.65E-03
49GO:0034220: ion transmembrane transport1.91E-03
50GO:0000413: protein peptidyl-prolyl isomerization1.91E-03
51GO:0042335: cuticle development1.91E-03
52GO:0045038: protein import into chloroplast thylakoid membrane2.11E-03
53GO:0031365: N-terminal protein amino acid modification2.11E-03
54GO:0035434: copper ion transmembrane transport2.11E-03
55GO:0016123: xanthophyll biosynthetic process2.11E-03
56GO:0016120: carotene biosynthetic process2.11E-03
57GO:0043097: pyrimidine nucleoside salvage2.11E-03
58GO:0006564: L-serine biosynthetic process2.11E-03
59GO:0009646: response to absence of light2.21E-03
60GO:0071554: cell wall organization or biogenesis2.54E-03
61GO:0042549: photosystem II stabilization2.60E-03
62GO:0006206: pyrimidine nucleobase metabolic process2.60E-03
63GO:0032973: amino acid export2.60E-03
64GO:0010190: cytochrome b6f complex assembly2.60E-03
65GO:0009416: response to light stimulus2.71E-03
66GO:0015979: photosynthesis2.96E-03
67GO:0055114: oxidation-reduction process3.11E-03
68GO:0009854: oxidative photosynthetic carbon pathway3.12E-03
69GO:0042372: phylloquinone biosynthetic process3.12E-03
70GO:0016126: sterol biosynthetic process3.66E-03
71GO:0010027: thylakoid membrane organization3.66E-03
72GO:0006401: RNA catabolic process3.68E-03
73GO:0009610: response to symbiotic fungus3.68E-03
74GO:0043090: amino acid import3.68E-03
75GO:0030497: fatty acid elongation3.68E-03
76GO:0006400: tRNA modification3.68E-03
77GO:2000070: regulation of response to water deprivation4.27E-03
78GO:0046620: regulation of organ growth4.27E-03
79GO:0032508: DNA duplex unwinding4.27E-03
80GO:0010411: xyloglucan metabolic process4.31E-03
81GO:0009932: cell tip growth4.89E-03
82GO:0015996: chlorophyll catabolic process4.89E-03
83GO:0007186: G-protein coupled receptor signaling pathway4.89E-03
84GO:0032544: plastid translation4.89E-03
85GO:0009793: embryo development ending in seed dormancy4.93E-03
86GO:0000902: cell morphogenesis5.54E-03
87GO:0009051: pentose-phosphate shunt, oxidative branch5.54E-03
88GO:0090305: nucleic acid phosphodiester bond hydrolysis5.54E-03
89GO:0010206: photosystem II repair5.54E-03
90GO:0080144: amino acid homeostasis5.54E-03
91GO:0006865: amino acid transport5.77E-03
92GO:0010205: photoinhibition6.21E-03
93GO:0043067: regulation of programmed cell death6.21E-03
94GO:0043069: negative regulation of programmed cell death6.92E-03
95GO:0009870: defense response signaling pathway, resistance gene-dependent6.92E-03
96GO:0000038: very long-chain fatty acid metabolic process7.65E-03
97GO:0009773: photosynthetic electron transport in photosystem I7.65E-03
98GO:0019684: photosynthesis, light reaction7.65E-03
99GO:0009089: lysine biosynthetic process via diaminopimelate7.65E-03
100GO:0009073: aromatic amino acid family biosynthetic process7.65E-03
101GO:0043085: positive regulation of catalytic activity7.65E-03
102GO:0009926: auxin polar transport7.79E-03
103GO:0042546: cell wall biogenesis8.11E-03
104GO:0045037: protein import into chloroplast stroma8.41E-03
105GO:0009658: chloroplast organization8.61E-03
106GO:0009735: response to cytokinin9.13E-03
107GO:0050826: response to freezing9.20E-03
108GO:0009767: photosynthetic electron transport chain9.20E-03
109GO:0006541: glutamine metabolic process1.00E-02
110GO:0010020: chloroplast fission1.00E-02
111GO:0019253: reductive pentose-phosphate cycle1.00E-02
112GO:0005985: sucrose metabolic process1.09E-02
113GO:0006071: glycerol metabolic process1.17E-02
114GO:0010025: wax biosynthetic process1.17E-02
115GO:0005992: trehalose biosynthetic process1.26E-02
116GO:0009116: nucleoside metabolic process1.26E-02
117GO:0000027: ribosomal large subunit assembly1.26E-02
118GO:0010026: trichome differentiation1.35E-02
119GO:0061077: chaperone-mediated protein folding1.45E-02
120GO:0031408: oxylipin biosynthetic process1.45E-02
121GO:0080092: regulation of pollen tube growth1.54E-02
122GO:0009814: defense response, incompatible interaction1.54E-02
123GO:0006284: base-excision repair1.74E-02
124GO:0019722: calcium-mediated signaling1.74E-02
125GO:0006810: transport1.81E-02
126GO:0080022: primary root development1.95E-02
127GO:0010197: polar nucleus fusion2.05E-02
128GO:0010182: sugar mediated signaling pathway2.05E-02
129GO:0006662: glycerol ether metabolic process2.05E-02
130GO:0016132: brassinosteroid biosynthetic process2.38E-02
131GO:0002229: defense response to oomycetes2.38E-02
132GO:0032502: developmental process2.50E-02
133GO:0010583: response to cyclopentenone2.50E-02
134GO:0045490: pectin catabolic process2.60E-02
135GO:1901657: glycosyl compound metabolic process2.62E-02
136GO:0007267: cell-cell signaling2.85E-02
137GO:0009733: response to auxin3.55E-02
138GO:0016311: dephosphorylation3.61E-02
139GO:0000160: phosphorelay signal transduction system3.88E-02
140GO:0010311: lateral root formation3.88E-02
141GO:0009407: toxin catabolic process4.01E-02
142GO:0010119: regulation of stomatal movement4.15E-02
143GO:0009853: photorespiration4.43E-02
144GO:0034599: cellular response to oxidative stress4.57E-02
145GO:0009409: response to cold4.64E-02
146GO:0006839: mitochondrial transport4.86E-02
147GO:0030001: metal ion transport4.86E-02
RankGO TermAdjusted P value
1GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
2GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
3GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
4GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
5GO:0008859: exoribonuclease II activity0.00E+00
6GO:0045435: lycopene epsilon cyclase activity0.00E+00
7GO:0008887: glycerate kinase activity0.00E+00
8GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
9GO:0046905: phytoene synthase activity0.00E+00
10GO:0050613: delta14-sterol reductase activity0.00E+00
11GO:0019843: rRNA binding5.90E-06
12GO:0003735: structural constituent of ribosome1.97E-05
13GO:0010328: auxin influx transmembrane transporter activity4.05E-05
14GO:0009922: fatty acid elongase activity6.46E-05
15GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.72E-04
16GO:0000248: C-5 sterol desaturase activity2.41E-04
17GO:0000170: sphingosine hydroxylase activity2.41E-04
18GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity2.41E-04
19GO:0080132: fatty acid alpha-hydroxylase activity2.41E-04
20GO:0004071: aspartate-ammonia ligase activity2.41E-04
21GO:0051996: squalene synthase activity2.41E-04
22GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water2.70E-04
23GO:0042389: omega-3 fatty acid desaturase activity5.34E-04
24GO:0004617: phosphoglycerate dehydrogenase activity5.34E-04
25GO:0004047: aminomethyltransferase activity5.34E-04
26GO:0004817: cysteine-tRNA ligase activity5.34E-04
27GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity5.34E-04
28GO:0042284: sphingolipid delta-4 desaturase activity5.34E-04
29GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.34E-04
30GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity5.34E-04
31GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase5.34E-04
32GO:0004310: farnesyl-diphosphate farnesyltransferase activity5.34E-04
33GO:0004089: carbonate dehydratase activity6.81E-04
34GO:0030267: glyoxylate reductase (NADP) activity8.68E-04
35GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor8.68E-04
36GO:0003863: 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity8.68E-04
37GO:0016531: copper chaperone activity8.68E-04
38GO:0019829: cation-transporting ATPase activity8.68E-04
39GO:0017150: tRNA dihydrouridine synthase activity8.68E-04
40GO:0004075: biotin carboxylase activity8.68E-04
41GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity9.50E-04
42GO:0102336: 3-oxo-arachidoyl-CoA synthase activity9.50E-04
43GO:0102337: 3-oxo-cerotoyl-CoA synthase activity9.50E-04
44GO:0004375: glycine dehydrogenase (decarboxylating) activity1.24E-03
45GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.24E-03
46GO:0030570: pectate lyase activity1.51E-03
47GO:0004845: uracil phosphoribosyltransferase activity1.65E-03
48GO:0004345: glucose-6-phosphate dehydrogenase activity1.65E-03
49GO:0052793: pectin acetylesterase activity1.65E-03
50GO:0015171: amino acid transmembrane transporter activity1.79E-03
51GO:0003989: acetyl-CoA carboxylase activity2.11E-03
52GO:0008725: DNA-3-methyladenine glycosylase activity2.11E-03
53GO:0016762: xyloglucan:xyloglucosyl transferase activity2.54E-03
54GO:0016208: AMP binding2.60E-03
55GO:0004849: uridine kinase activity3.12E-03
56GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity3.12E-03
57GO:0016413: O-acetyltransferase activity3.46E-03
58GO:0015250: water channel activity3.66E-03
59GO:0008235: metalloexopeptidase activity3.68E-03
60GO:0004564: beta-fructofuranosidase activity4.27E-03
61GO:0016798: hydrolase activity, acting on glycosyl bonds4.31E-03
62GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.42E-03
63GO:0005375: copper ion transmembrane transporter activity4.89E-03
64GO:0008889: glycerophosphodiester phosphodiesterase activity5.54E-03
65GO:0004575: sucrose alpha-glucosidase activity6.21E-03
66GO:0050661: NADP binding6.89E-03
67GO:0004805: trehalose-phosphatase activity6.92E-03
68GO:0008047: enzyme activator activity6.92E-03
69GO:0004177: aminopeptidase activity7.65E-03
70GO:0005089: Rho guanyl-nucleotide exchange factor activity7.65E-03
71GO:0015293: symporter activity8.76E-03
72GO:0000175: 3'-5'-exoribonuclease activity9.20E-03
73GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.20E-03
74GO:0051287: NAD binding9.44E-03
75GO:0008146: sulfotransferase activity1.09E-02
76GO:0005528: FK506 binding1.26E-02
77GO:0019706: protein-cysteine S-palmitoyltransferase activity1.45E-02
78GO:0004540: ribonuclease activity1.45E-02
79GO:0004176: ATP-dependent peptidase activity1.45E-02
80GO:0008514: organic anion transmembrane transporter activity1.74E-02
81GO:0047134: protein-disulfide reductase activity1.84E-02
82GO:0008080: N-acetyltransferase activity2.05E-02
83GO:0004791: thioredoxin-disulfide reductase activity2.16E-02
84GO:0050662: coenzyme binding2.16E-02
85GO:0004518: nuclease activity2.50E-02
86GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.62E-02
87GO:0000156: phosphorelay response regulator activity2.62E-02
88GO:0005509: calcium ion binding2.66E-02
89GO:0008483: transaminase activity2.85E-02
90GO:0016722: oxidoreductase activity, oxidizing metal ions2.85E-02
91GO:0016597: amino acid binding2.98E-02
92GO:0003824: catalytic activity3.43E-02
93GO:0102483: scopolin beta-glucosidase activity3.48E-02
94GO:0008236: serine-type peptidase activity3.61E-02
95GO:0003746: translation elongation factor activity4.43E-02
96GO:0016491: oxidoreductase activity4.46E-02
97GO:0003993: acid phosphatase activity4.57E-02
98GO:0008422: beta-glucosidase activity4.71E-02
99GO:0051539: 4 iron, 4 sulfur cluster binding4.86E-02
RankGO TermAdjusted P value
1GO:0009507: chloroplast1.51E-27
2GO:0009570: chloroplast stroma6.21E-20
3GO:0009941: chloroplast envelope1.80E-15
4GO:0009543: chloroplast thylakoid lumen6.73E-13
5GO:0031977: thylakoid lumen2.78E-10
6GO:0009579: thylakoid3.93E-10
7GO:0009535: chloroplast thylakoid membrane1.28E-07
8GO:0009654: photosystem II oxygen evolving complex2.50E-06
9GO:0019898: extrinsic component of membrane1.27E-05
10GO:0031225: anchored component of membrane1.65E-05
11GO:0009534: chloroplast thylakoid4.50E-05
12GO:0005840: ribosome4.96E-05
13GO:0031969: chloroplast membrane8.20E-05
14GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex2.41E-04
15GO:0046658: anchored component of plasma membrane2.51E-04
16GO:0042170: plastid membrane5.34E-04
17GO:0030095: chloroplast photosystem II7.67E-04
18GO:0009528: plastid inner membrane8.68E-04
19GO:0005775: vacuolar lumen1.24E-03
20GO:0005960: glycine cleavage complex1.24E-03
21GO:0015935: small ribosomal subunit1.27E-03
22GO:0009505: plant-type cell wall1.29E-03
23GO:0009527: plastid outer membrane1.65E-03
24GO:0048046: apoplast1.75E-03
25GO:0000178: exosome (RNase complex)2.11E-03
26GO:0009536: plastid4.12E-03
27GO:0015934: large ribosomal subunit5.51E-03
28GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)5.54E-03
29GO:0016324: apical plasma membrane6.92E-03
30GO:0000311: plastid large ribosomal subunit8.41E-03
31GO:0032040: small-subunit processome8.41E-03
32GO:0022626: cytosolic ribosome9.78E-03
33GO:0030659: cytoplasmic vesicle membrane1.00E-02
34GO:0030176: integral component of endoplasmic reticulum membrane1.09E-02
35GO:0009532: plastid stroma1.45E-02
36GO:0009706: chloroplast inner membrane1.50E-02
37GO:0005789: endoplasmic reticulum membrane1.93E-02
38GO:0016020: membrane2.20E-02
39GO:0005759: mitochondrial matrix2.37E-02
40GO:0005778: peroxisomal membrane2.85E-02
41GO:0010319: stromule2.85E-02
42GO:0000932: P-body3.10E-02
43GO:0009707: chloroplast outer membrane3.75E-02
44GO:0000325: plant-type vacuole4.15E-02
45GO:0005819: spindle4.71E-02
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Gene type



Gene DE type