co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G71880

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006858: extracellular transport	0.00E+00
2	GO:0043201: response to leucine	0.00E+00
3	GO:1900367: positive regulation of defense response to insect	0.00E+00
4	GO:0046109: uridine biosynthetic process	0.00E+00
5	GO:0080053: response to phenylalanine	0.00E+00
6	GO:0010360: negative regulation of anion channel activity	0.00E+00
7	GO:1901017: negative regulation of potassium ion transmembrane transporter activity	0.00E+00
8	GO:0080052: response to histidine	0.00E+00
9	GO:0030149: sphingolipid catabolic process	0.00E+00
10	GO:0006793: phosphorus metabolic process	0.00E+00
11	GO:0072722: response to amitrole	0.00E+00
12	GO:0071327: cellular response to trehalose stimulus	0.00E+00
13	GO:0006468: protein phosphorylation	9.89E-08
14	GO:0043069: negative regulation of programmed cell death	8.96E-06
15	GO:0080142: regulation of salicylic acid biosynthetic process	2.61E-05
16	GO:0051245: negative regulation of cellular defense response	1.86E-04
17	GO:0006481: C-terminal protein methylation	1.86E-04
18	GO:1990022: RNA polymerase III complex localization to nucleus	1.86E-04
19	GO:1902361: mitochondrial pyruvate transmembrane transport	1.86E-04
20	GO:1901183: positive regulation of camalexin biosynthetic process	1.86E-04
21	GO:0044376: RNA polymerase II complex import to nucleus	1.86E-04
22	GO:0010265: SCF complex assembly	1.86E-04
23	GO:0009821: alkaloid biosynthetic process	2.25E-04
24	GO:0009615: response to virus	2.58E-04
25	GO:1900426: positive regulation of defense response to bacterium	2.69E-04
26	GO:0009816: defense response to bacterium, incompatible interaction	2.78E-04
27	GO:0006850: mitochondrial pyruvate transport	4.19E-04
28	GO:0015865: purine nucleotide transport	4.19E-04
29	GO:0019752: carboxylic acid metabolic process	4.19E-04
30	GO:0042939: tripeptide transport	4.19E-04
31	GO:0019441: tryptophan catabolic process to kynurenine	4.19E-04
32	GO:0006996: organelle organization	4.19E-04
33	GO:0051592: response to calcium ion	4.19E-04
34	GO:0015914: phospholipid transport	4.19E-04
35	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	4.19E-04
36	GO:0010618: aerenchyma formation	4.19E-04
37	GO:0010150: leaf senescence	5.17E-04
38	GO:0007166: cell surface receptor signaling pathway	6.33E-04
39	GO:0009617: response to bacterium	6.76E-04
40	GO:0010272: response to silver ion	6.84E-04
41	GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway	6.84E-04
42	GO:0000289: nuclear-transcribed mRNA poly(A) tail shortening	6.84E-04
43	GO:0002230: positive regulation of defense response to virus by host	6.84E-04
44	GO:0010359: regulation of anion channel activity	6.84E-04
45	GO:0010351: lithium ion transport	6.84E-04
46	GO:0009410: response to xenobiotic stimulus	6.84E-04
47	GO:0009863: salicylic acid mediated signaling pathway	7.41E-04
48	GO:0006874: cellular calcium ion homeostasis	8.15E-04
49	GO:0009814: defense response, incompatible interaction	9.73E-04
50	GO:0046902: regulation of mitochondrial membrane permeability	9.77E-04
51	GO:0009052: pentose-phosphate shunt, non-oxidative branch	9.77E-04
52	GO:0033014: tetrapyrrole biosynthetic process	9.77E-04
53	GO:0006612: protein targeting to membrane	9.77E-04
54	GO:1902290: positive regulation of defense response to oomycetes	9.77E-04
55	GO:0006882: cellular zinc ion homeostasis	9.77E-04
56	GO:0001676: long-chain fatty acid metabolic process	9.77E-04
57	GO:0048194: Golgi vesicle budding	9.77E-04
58	GO:0010363: regulation of plant-type hypersensitive response	1.29E-03
59	GO:0042938: dipeptide transport	1.29E-03
60	GO:0042742: defense response to bacterium	1.32E-03
61	GO:0046777: protein autophosphorylation	1.53E-03
62	GO:0061025: membrane fusion	1.54E-03
63	GO:0035556: intracellular signal transduction	1.55E-03
64	GO:0010225: response to UV-C	1.65E-03
65	GO:0009697: salicylic acid biosynthetic process	1.65E-03
66	GO:0030041: actin filament polymerization	1.65E-03
67	GO:0007029: endoplasmic reticulum organization	1.65E-03
68	GO:0009742: brassinosteroid mediated signaling pathway	1.66E-03
69	GO:1902456: regulation of stomatal opening	2.03E-03
70	GO:0002238: response to molecule of fungal origin	2.03E-03
71	GO:0006014: D-ribose metabolic process	2.03E-03
72	GO:0010942: positive regulation of cell death	2.03E-03
73	GO:2000067: regulation of root morphogenesis	2.43E-03
74	GO:0000911: cytokinesis by cell plate formation	2.43E-03
75	GO:0009612: response to mechanical stimulus	2.43E-03
76	GO:0010555: response to mannitol	2.43E-03
77	GO:0010310: regulation of hydrogen peroxide metabolic process	2.43E-03
78	GO:0009751: response to salicylic acid	2.44E-03
79	GO:0009753: response to jasmonic acid	2.77E-03
80	GO:0009627: systemic acquired resistance	2.84E-03
81	GO:0030026: cellular manganese ion homeostasis	2.87E-03
82	GO:1900057: positive regulation of leaf senescence	2.87E-03
83	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.32E-03
84	GO:0043068: positive regulation of programmed cell death	3.32E-03
85	GO:0006605: protein targeting	3.32E-03
86	GO:2000070: regulation of response to water deprivation	3.32E-03
87	GO:0009699: phenylpropanoid biosynthetic process	3.80E-03
88	GO:0007186: G-protein coupled receptor signaling pathway	3.80E-03
89	GO:0043562: cellular response to nitrogen levels	3.80E-03
90	GO:0009808: lignin metabolic process	3.80E-03
91	GO:2000031: regulation of salicylic acid mediated signaling pathway	3.80E-03
92	GO:0009867: jasmonic acid mediated signaling pathway	4.19E-03
93	GO:0051865: protein autoubiquitination	4.30E-03
94	GO:0006783: heme biosynthetic process	4.30E-03
95	GO:0010112: regulation of systemic acquired resistance	4.30E-03
96	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	4.82E-03
97	GO:0008202: steroid metabolic process	4.82E-03
98	GO:0006631: fatty acid metabolic process	4.97E-03
99	GO:0055062: phosphate ion homeostasis	5.36E-03
100	GO:0006032: chitin catabolic process	5.36E-03
101	GO:0051707: response to other organism	5.39E-03
102	GO:0009737: response to abscisic acid	5.86E-03
103	GO:0000272: polysaccharide catabolic process	5.92E-03
104	GO:0009750: response to fructose	5.92E-03
105	GO:0030148: sphingolipid biosynthetic process	5.92E-03
106	GO:0006790: sulfur compound metabolic process	6.51E-03
107	GO:0012501: programmed cell death	6.51E-03
108	GO:0002213: defense response to insect	6.51E-03
109	GO:0015706: nitrate transport	6.51E-03
110	GO:0010105: negative regulation of ethylene-activated signaling pathway	6.51E-03
111	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	6.51E-03
112	GO:0042538: hyperosmotic salinity response	6.76E-03
113	GO:0006626: protein targeting to mitochondrion	7.11E-03
114	GO:0002237: response to molecule of bacterial origin	7.73E-03
115	GO:0055114: oxidation-reduction process	7.78E-03
116	GO:0044550: secondary metabolite biosynthetic process	7.87E-03
117	GO:0010167: response to nitrate	8.37E-03
118	GO:0070588: calcium ion transmembrane transport	8.37E-03
119	GO:0046854: phosphatidylinositol phosphorylation	8.37E-03
120	GO:0009626: plant-type hypersensitive response	9.15E-03
121	GO:0009620: response to fungus	9.44E-03
122	GO:0080147: root hair cell development	9.71E-03
123	GO:0010073: meristem maintenance	1.04E-02
124	GO:0018105: peptidyl-serine phosphorylation	1.07E-02
125	GO:0048278: vesicle docking	1.11E-02
126	GO:0016998: cell wall macromolecule catabolic process	1.11E-02
127	GO:0016042: lipid catabolic process	1.12E-02
128	GO:0006629: lipid metabolic process	1.16E-02
129	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.19E-02
130	GO:0030433: ubiquitin-dependent ERAD pathway	1.19E-02
131	GO:0031348: negative regulation of defense response	1.19E-02
132	GO:0071456: cellular response to hypoxia	1.19E-02
133	GO:0009625: response to insect	1.26E-02
134	GO:0006012: galactose metabolic process	1.26E-02
135	GO:0009058: biosynthetic process	1.37E-02
136	GO:0042147: retrograde transport, endosome to Golgi	1.42E-02
137	GO:0006952: defense response	1.44E-02
138	GO:0042391: regulation of membrane potential	1.50E-02
139	GO:0010087: phloem or xylem histogenesis	1.50E-02
140	GO:0006520: cellular amino acid metabolic process	1.58E-02
141	GO:0010305: leaf vascular tissue pattern formation	1.58E-02
142	GO:0046323: glucose import	1.58E-02
143	GO:0006633: fatty acid biosynthetic process	1.63E-02
144	GO:0006814: sodium ion transport	1.66E-02
145	GO:0042752: regulation of circadian rhythm	1.66E-02
146	GO:0006623: protein targeting to vacuole	1.75E-02
147	GO:0009749: response to glucose	1.75E-02
148	GO:0019252: starch biosynthetic process	1.75E-02
149	GO:0071554: cell wall organization or biogenesis	1.83E-02
150	GO:0002229: defense response to oomycetes	1.83E-02
151	GO:0010193: response to ozone	1.83E-02
152	GO:0006891: intra-Golgi vesicle-mediated transport	1.83E-02
153	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	2.01E-02
154	GO:0016310: phosphorylation	2.29E-02
155	GO:0009738: abscisic acid-activated signaling pathway	2.30E-02
156	GO:0001666: response to hypoxia	2.38E-02
157	GO:0009611: response to wounding	2.46E-02
158	GO:0015031: protein transport	2.47E-02
159	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	2.48E-02
160	GO:0042128: nitrate assimilation	2.58E-02
161	GO:0006906: vesicle fusion	2.58E-02
162	GO:0015995: chlorophyll biosynthetic process	2.67E-02
163	GO:0016311: dephosphorylation	2.78E-02
164	GO:0016049: cell growth	2.78E-02
165	GO:0030244: cellulose biosynthetic process	2.88E-02
166	GO:0008219: cell death	2.88E-02
167	GO:0010311: lateral root formation	2.98E-02
168	GO:0010119: regulation of stomatal movement	3.19E-02
169	GO:0007568: aging	3.19E-02
170	GO:0009723: response to ethylene	3.22E-02
171	GO:0055085: transmembrane transport	3.23E-02
172	GO:0016051: carbohydrate biosynthetic process	3.40E-02
173	GO:0010200: response to chitin	3.56E-02
174	GO:0006839: mitochondrial transport	3.74E-02
175	GO:0006887: exocytosis	3.85E-02
176	GO:0006897: endocytosis	3.85E-02
177	GO:0042542: response to hydrogen peroxide	3.96E-02
178	GO:0009744: response to sucrose	4.08E-02
179	GO:0006886: intracellular protein transport	4.24E-02
180	GO:0009636: response to toxic substance	4.43E-02
181	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	4.67E-02
182	GO:0006812: cation transport	4.79E-02

Rank	GO Term	Adjusted P value
1	GO:0008117: sphinganine-1-phosphate aldolase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0015591: D-ribose transmembrane transporter activity	0.00E+00
4	GO:0015575: mannitol transmembrane transporter activity	0.00E+00
5	GO:0016312: inositol bisphosphate phosphatase activity	0.00E+00
6	GO:0015148: D-xylose transmembrane transporter activity	0.00E+00
7	GO:0005365: myo-inositol transmembrane transporter activity	0.00E+00
8	GO:0015576: sorbitol transmembrane transporter activity	0.00E+00
9	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
10	GO:0004674: protein serine/threonine kinase activity	3.04E-08
11	GO:0016301: kinase activity	7.92E-07
12	GO:0005524: ATP binding	4.59E-06
13	GO:0004040: amidase activity	4.22E-05
14	GO:0102391: decanoate--CoA ligase activity	8.69E-05
15	GO:0004467: long-chain fatty acid-CoA ligase activity	1.15E-04
16	GO:0051669: fructan beta-fructosidase activity	1.86E-04
17	GO:0004325: ferrochelatase activity	1.86E-04
18	GO:0031219: levanase activity	1.86E-04
19	GO:0015168: glycerol transmembrane transporter activity	1.86E-04
20	GO:0004671: protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity	1.86E-04
21	GO:0016844: strictosidine synthase activity	2.69E-04
22	GO:0004806: triglyceride lipase activity	3.22E-04
23	GO:0004683: calmodulin-dependent protein kinase activity	3.22E-04
24	GO:0045140: inositol phosphoceramide synthase activity	4.19E-04
25	GO:0004061: arylformamidase activity	4.19E-04
26	GO:0050736: O-malonyltransferase activity	4.19E-04
27	GO:0015036: disulfide oxidoreductase activity	4.19E-04
28	GO:0042937: tripeptide transporter activity	4.19E-04
29	GO:0008430: selenium binding	6.84E-04
30	GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity	6.84E-04
31	GO:0050833: pyruvate transmembrane transporter activity	6.84E-04
32	GO:0031683: G-protein beta/gamma-subunit complex binding	6.84E-04
33	GO:0004751: ribose-5-phosphate isomerase activity	6.84E-04
34	GO:0016805: dipeptidase activity	6.84E-04
35	GO:0016595: glutamate binding	6.84E-04
36	GO:0001664: G-protein coupled receptor binding	6.84E-04
37	GO:0005516: calmodulin binding	7.36E-04
38	GO:0005354: galactose transmembrane transporter activity	9.77E-04
39	GO:0005509: calcium ion binding	1.12E-03
40	GO:0015369: calcium:proton antiporter activity	1.29E-03
41	GO:0015368: calcium:cation antiporter activity	1.29E-03
42	GO:0042936: dipeptide transporter activity	1.29E-03
43	GO:0015145: monosaccharide transmembrane transporter activity	1.65E-03
44	GO:0005496: steroid binding	1.65E-03
45	GO:0005471: ATP:ADP antiporter activity	1.65E-03
46	GO:0031593: polyubiquitin binding	2.03E-03
47	GO:0047714: galactolipase activity	2.03E-03
48	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.03E-03
49	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.43E-03
50	GO:0004012: phospholipid-translocating ATPase activity	2.43E-03
51	GO:0004747: ribokinase activity	2.43E-03
52	GO:0004656: procollagen-proline 4-dioxygenase activity	2.43E-03
53	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	2.83E-03
54	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.84E-03
55	GO:0016831: carboxy-lyase activity	2.87E-03
56	GO:0008235: metalloexopeptidase activity	2.87E-03
57	GO:0004034: aldose 1-epimerase activity	3.32E-03
58	GO:0052747: sinapyl alcohol dehydrogenase activity	3.32E-03
59	GO:0008865: fructokinase activity	3.32E-03
60	GO:0015491: cation:cation antiporter activity	3.32E-03
61	GO:0004714: transmembrane receptor protein tyrosine kinase activity	3.32E-03
62	GO:0008142: oxysterol binding	3.80E-03
63	GO:0008970: phosphatidylcholine 1-acylhydrolase activity	3.80E-03
64	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.19E-03
65	GO:0071949: FAD binding	4.30E-03
66	GO:0004743: pyruvate kinase activity	4.82E-03
67	GO:0030955: potassium ion binding	4.82E-03
68	GO:0015112: nitrate transmembrane transporter activity	4.82E-03
69	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	4.82E-03
70	GO:0004568: chitinase activity	5.36E-03
71	GO:0005484: SNAP receptor activity	5.39E-03
72	GO:0008794: arsenate reductase (glutaredoxin) activity	5.92E-03
73	GO:0004177: aminopeptidase activity	5.92E-03
74	GO:0045551: cinnamyl-alcohol dehydrogenase activity	6.51E-03
75	GO:0005388: calcium-transporting ATPase activity	7.11E-03
76	GO:0000175: 3'-5'-exoribonuclease activity	7.11E-03
77	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.11E-03
78	GO:0005262: calcium channel activity	7.11E-03
79	GO:0061630: ubiquitin protein ligase activity	7.54E-03
80	GO:0004535: poly(A)-specific ribonuclease activity	7.73E-03
81	GO:0030553: cGMP binding	8.37E-03
82	GO:0008061: chitin binding	8.37E-03
83	GO:0005217: intracellular ligand-gated ion channel activity	8.37E-03
84	GO:0004970: ionotropic glutamate receptor activity	8.37E-03
85	GO:0004190: aspartic-type endopeptidase activity	8.37E-03
86	GO:0030552: cAMP binding	8.37E-03
87	GO:0030246: carbohydrate binding	9.34E-03
88	GO:0004672: protein kinase activity	9.52E-03
89	GO:0031418: L-ascorbic acid binding	9.71E-03
90	GO:0005216: ion channel activity	1.04E-02
91	GO:0004540: ribonuclease activity	1.11E-02
92	GO:0004707: MAP kinase activity	1.11E-02
93	GO:0033612: receptor serine/threonine kinase binding	1.11E-02
94	GO:0008408: 3'-5' exonuclease activity	1.11E-02
95	GO:0003924: GTPase activity	1.16E-02
96	GO:0030551: cyclic nucleotide binding	1.50E-02
97	GO:0005249: voltage-gated potassium channel activity	1.50E-02
98	GO:0016853: isomerase activity	1.66E-02
99	GO:0005355: glucose transmembrane transporter activity	1.66E-02
100	GO:0010181: FMN binding	1.66E-02
101	GO:0016722: oxidoreductase activity, oxidizing metal ions	2.19E-02
102	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.28E-02
103	GO:0016413: O-acetyltransferase activity	2.29E-02
104	GO:0005515: protein binding	2.34E-02
105	GO:0051213: dioxygenase activity	2.38E-02
106	GO:0016491: oxidoreductase activity	2.60E-02
107	GO:0030247: polysaccharide binding	2.67E-02
108	GO:0000287: magnesium ion binding	2.73E-02
109	GO:0004842: ubiquitin-protein transferase activity	2.80E-02
110	GO:0030145: manganese ion binding	3.19E-02
111	GO:0003746: translation elongation factor activity	3.40E-02
112	GO:0000149: SNARE binding	3.63E-02
113	GO:0004712: protein serine/threonine/tyrosine kinase activity	3.63E-02
114	GO:0004364: glutathione transferase activity	3.96E-02
115	GO:0004871: signal transducer activity	4.31E-02
116	GO:0005198: structural molecule activity	4.43E-02
117	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	4.44E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	4.19E-11
2	GO:0005886: plasma membrane	2.27E-05
3	GO:0005783: endoplasmic reticulum	4.17E-05
4	GO:0005789: endoplasmic reticulum membrane	4.99E-05
5	GO:0005911: cell-cell junction	1.86E-04
6	GO:0030014: CCR4-NOT complex	1.86E-04
7	GO:0031314: extrinsic component of mitochondrial inner membrane	4.19E-04
8	GO:0016020: membrane	6.52E-04
9	GO:0030658: transport vesicle membrane	9.77E-04
10	GO:0031461: cullin-RING ubiquitin ligase complex	9.77E-04
11	GO:0000794: condensed nuclear chromosome	2.87E-03
12	GO:0005802: trans-Golgi network	3.23E-03
13	GO:0005794: Golgi apparatus	3.28E-03
14	GO:0031305: integral component of mitochondrial inner membrane	3.32E-03
15	GO:0005829: cytosol	4.13E-03
16	GO:0017119: Golgi transport complex	5.36E-03
17	GO:0043234: protein complex	9.03E-03
18	GO:0005773: vacuole	1.31E-02
19	GO:0005768: endosome	1.48E-02
20	GO:0005887: integral component of plasma membrane	1.71E-02
21	GO:0009504: cell plate	1.75E-02
22	GO:0005778: peroxisomal membrane	2.19E-02
23	GO:0000139: Golgi membrane	2.71E-02
24	GO:0009707: chloroplast outer membrane	2.88E-02
25	GO:0000151: ubiquitin ligase complex	2.88E-02
26	GO:0005819: spindle	3.63E-02
27	GO:0031201: SNARE complex	3.85E-02
28	GO:0031902: late endosome membrane	3.85E-02
29	GO:0005743: mitochondrial inner membrane	4.71E-02
30	GO:0031966: mitochondrial membrane	4.79E-02