co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G71840

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006493: protein O-linked glycosylation	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:0008535: respiratory chain complex IV assembly	4.61E-05
4	GO:0097054: L-glutamate biosynthetic process	4.61E-05
5	GO:0030010: establishment of cell polarity	4.61E-05
6	GO:0006537: glutamate biosynthetic process	1.23E-04
7	GO:0001676: long-chain fatty acid metabolic process	1.23E-04
8	GO:0033617: mitochondrial respiratory chain complex IV assembly	1.23E-04
9	GO:0019287: isopentenyl diphosphate biosynthetic process, mevalonate pathway	1.69E-04
10	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.69E-04
11	GO:0019676: ammonia assimilation cycle	1.69E-04
12	GO:0098719: sodium ion import across plasma membrane	2.19E-04
13	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.72E-04
14	GO:0010405: arabinogalactan protein metabolic process	2.72E-04
15	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	3.27E-04
16	GO:1900056: negative regulation of leaf senescence	3.84E-04
17	GO:0006002: fructose 6-phosphate metabolic process	5.05E-04
18	GO:0009880: embryonic pattern specification	5.05E-04
19	GO:0046685: response to arsenic-containing substance	5.68E-04
20	GO:0042761: very long-chain fatty acid biosynthetic process	6.32E-04
21	GO:0051453: regulation of intracellular pH	6.32E-04
22	GO:0048354: mucilage biosynthetic process involved in seed coat development	6.32E-04
23	GO:0009790: embryo development	7.34E-04
24	GO:0072593: reactive oxygen species metabolic process	7.68E-04
25	GO:0010053: root epidermal cell differentiation	1.06E-03
26	GO:0030150: protein import into mitochondrial matrix	1.21E-03
27	GO:0000027: ribosomal large subunit assembly	1.21E-03
28	GO:0009826: unidimensional cell growth	1.25E-03
29	GO:0061077: chaperone-mediated protein folding	1.37E-03
30	GO:0080092: regulation of pollen tube growth	1.46E-03
31	GO:0042391: regulation of membrane potential	1.81E-03
32	GO:0010501: RNA secondary structure unwinding	1.81E-03
33	GO:0045454: cell redox homeostasis	1.91E-03
34	GO:0006814: sodium ion transport	2.00E-03
35	GO:0010183: pollen tube guidance	2.09E-03
36	GO:0010193: response to ozone	2.19E-03
37	GO:0071805: potassium ion transmembrane transport	2.60E-03
38	GO:0016126: sterol biosynthetic process	2.80E-03
39	GO:0009734: auxin-activated signaling pathway	3.27E-03
40	GO:0009407: toxin catabolic process	3.59E-03
41	GO:0048527: lateral root development	3.70E-03
42	GO:0010043: response to zinc ion	3.70E-03
43	GO:0009735: response to cytokinin	3.76E-03
44	GO:0006631: fatty acid metabolic process	4.43E-03
45	GO:0006486: protein glycosylation	5.75E-03
46	GO:0009736: cytokinin-activated signaling pathway	5.75E-03
47	GO:0006096: glycolytic process	6.45E-03
48	GO:0009553: embryo sac development	7.19E-03
49	GO:0009624: response to nematode	7.34E-03
50	GO:0055114: oxidation-reduction process	7.73E-03
51	GO:0009414: response to water deprivation	8.10E-03
52	GO:0042742: defense response to bacterium	8.30E-03
53	GO:0042744: hydrogen peroxide catabolic process	9.39E-03
54	GO:0006470: protein dephosphorylation	1.18E-02
55	GO:0005975: carbohydrate metabolic process	1.26E-02
56	GO:0046686: response to cadmium ion	1.30E-02
57	GO:0042254: ribosome biogenesis	1.48E-02
58	GO:0009860: pollen tube growth	1.54E-02
59	GO:0048366: leaf development	1.64E-02
60	GO:0009793: embryo development ending in seed dormancy	1.93E-02
61	GO:0048364: root development	2.32E-02
62	GO:0006397: mRNA processing	2.32E-02
63	GO:0009651: response to salt stress	2.80E-02
64	GO:0009416: response to light stimulus	3.39E-02
65	GO:0006952: defense response	4.61E-02

Rank	GO Term	Adjusted P value
1	GO:0004631: phosphomevalonate kinase activity	0.00E+00
2	GO:0015930: glutamate synthase activity	0.00E+00
3	GO:0070008: serine-type exopeptidase activity	1.77E-05
4	GO:0016041: glutamate synthase (ferredoxin) activity	1.77E-05
5	GO:0008802: betaine-aldehyde dehydrogenase activity	1.77E-05
6	GO:0005528: FK506 binding	2.75E-05
7	GO:0004557: alpha-galactosidase activity	8.18E-05
8	GO:0052692: raffinose alpha-galactosidase activity	8.18E-05
9	GO:0031176: endo-1,4-beta-xylanase activity	1.23E-04
10	GO:0051538: 3 iron, 4 sulfur cluster binding	2.19E-04
11	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.72E-04
12	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.72E-04
13	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.13E-04
14	GO:0004602: glutathione peroxidase activity	3.27E-04
15	GO:0102391: decanoate--CoA ligase activity	3.27E-04
16	GO:0043295: glutathione binding	3.84E-04
17	GO:0004467: long-chain fatty acid-CoA ligase activity	3.84E-04
18	GO:0003872: 6-phosphofructokinase activity	3.84E-04
19	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	6.32E-04
20	GO:0001054: RNA polymerase I activity	7.68E-04
21	GO:0015386: potassium:proton antiporter activity	7.68E-04
22	GO:0008378: galactosyltransferase activity	8.38E-04
23	GO:0030552: cAMP binding	1.06E-03
24	GO:0030553: cGMP binding	1.06E-03
25	GO:0005216: ion channel activity	1.29E-03
26	GO:0047134: protein-disulfide reductase activity	1.72E-03
27	GO:0005249: voltage-gated potassium channel activity	1.81E-03
28	GO:0030551: cyclic nucleotide binding	1.81E-03
29	GO:0008536: Ran GTPase binding	1.90E-03
30	GO:0004791: thioredoxin-disulfide reductase activity	2.00E-03
31	GO:0015385: sodium:proton antiporter activity	2.39E-03
32	GO:0004721: phosphoprotein phosphatase activity	3.13E-03
33	GO:0004004: ATP-dependent RNA helicase activity	3.13E-03
34	GO:0008236: serine-type peptidase activity	3.24E-03
35	GO:0000166: nucleotide binding	4.11E-03
36	GO:0004364: glutathione transferase activity	4.56E-03
37	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	5.75E-03
38	GO:0005507: copper ion binding	5.84E-03
39	GO:0005516: calmodulin binding	6.17E-03
40	GO:0008026: ATP-dependent helicase activity	7.64E-03
41	GO:0004386: helicase activity	7.79E-03
42	GO:0016758: transferase activity, transferring hexosyl groups	8.42E-03
43	GO:0019843: rRNA binding	8.58E-03
44	GO:0004252: serine-type endopeptidase activity	9.23E-03
45	GO:0004601: peroxidase activity	1.46E-02
46	GO:0004722: protein serine/threonine phosphatase activity	2.07E-02
47	GO:0046872: metal ion binding	3.46E-02
48	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.13E-02
49	GO:0030246: carbohydrate binding	4.18E-02
50	GO:0005524: ATP binding	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005945: 6-phosphofructokinase complex	2.19E-04
3	GO:0005736: DNA-directed RNA polymerase I complex	5.68E-04
4	GO:0005777: peroxisome	5.74E-04
5	GO:0043234: protein complex	1.13E-03
6	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.63E-03
7	GO:0005743: mitochondrial inner membrane	2.18E-03
8	GO:0005829: cytosol	2.31E-03
9	GO:0032580: Golgi cisterna membrane	2.49E-03
10	GO:0000932: P-body	2.80E-03
11	GO:0005774: vacuolar membrane	5.51E-03
12	GO:0048046: apoplast	5.86E-03
13	GO:0010008: endosome membrane	6.60E-03
14	GO:0005840: ribosome	8.70E-03
15	GO:0005773: vacuole	9.48E-03
16	GO:0009505: plant-type cell wall	1.04E-02
17	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.56E-02
18	GO:0005887: integral component of plasma membrane	2.80E-02
19	GO:0009506: plasmodesma	3.01E-02
20	GO:0005618: cell wall	3.31E-02
21	GO:0009579: thylakoid	3.85E-02
22	GO:0005794: Golgi apparatus	4.37E-02