Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G69935

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009249: protein lipoylation0.00E+00
2GO:0009106: lipoate metabolic process0.00E+00
3GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process8.12E-06
4GO:2001141: regulation of RNA biosynthetic process6.14E-05
5GO:0009902: chloroplast relocation8.58E-05
6GO:0019464: glycine decarboxylation via glycine cleavage system8.58E-05
7GO:0010236: plastoquinone biosynthetic process1.12E-04
8GO:0009107: lipoate biosynthetic process1.12E-04
9GO:1902183: regulation of shoot apical meristem development1.12E-04
10GO:0071482: cellular response to light stimulus2.71E-04
11GO:2000024: regulation of leaf development3.07E-04
12GO:0019684: photosynthesis, light reaction4.19E-04
13GO:0006352: DNA-templated transcription, initiation4.19E-04
14GO:0009767: photosynthetic electron transport chain4.98E-04
15GO:0009944: polarity specification of adaxial/abaxial axis6.66E-04
16GO:0080092: regulation of pollen tube growth7.99E-04
17GO:0006730: one-carbon metabolic process7.99E-04
18GO:0009416: response to light stimulus1.62E-03
19GO:0009853: photorespiration2.10E-03
20GO:0009744: response to sucrose2.49E-03
21GO:0018105: peptidyl-serine phosphorylation3.94E-03
22GO:0006810: transport4.73E-03
23GO:0046777: protein autophosphorylation9.25E-03
24GO:0045454: cell redox homeostasis1.00E-02
25GO:0009751: response to salicylic acid1.15E-02
26GO:0008152: metabolic process1.24E-02
27GO:0006357: regulation of transcription from RNA polymerase II promoter1.41E-02
28GO:0009735: response to cytokinin1.63E-02
29GO:0009738: abscisic acid-activated signaling pathway1.70E-02
30GO:0035556: intracellular signal transduction1.81E-02
31GO:0006355: regulation of transcription, DNA-templated2.79E-02
32GO:0030154: cell differentiation3.06E-02
33GO:0009409: response to cold3.58E-02
34GO:0046686: response to cadmium ion3.95E-02
RankGO TermAdjusted P value
1GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
2GO:0017118: lipoyltransferase activity2.19E-05
3GO:0004326: tetrahydrofolylpolyglutamate synthase activity2.19E-05
4GO:0016415: octanoyltransferase activity2.19E-05
5GO:0004148: dihydrolipoyl dehydrogenase activity3.99E-05
6GO:0004375: glycine dehydrogenase (decarboxylating) activity6.14E-05
7GO:0001053: plastid sigma factor activity8.58E-05
8GO:0016987: sigma factor activity8.58E-05
9GO:0004723: calcium-dependent protein serine/threonine phosphatase activity1.71E-04
10GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.71E-04
11GO:0005089: Rho guanyl-nucleotide exchange factor activity4.19E-04
12GO:0016597: amino acid binding1.45E-03
13GO:0009931: calcium-dependent protein serine/threonine kinase activity1.62E-03
14GO:0004683: calmodulin-dependent protein kinase activity1.67E-03
15GO:0050897: cobalt ion binding1.97E-03
16GO:0005198: structural molecule activity2.69E-03
17GO:0005509: calcium ion binding2.99E-03
18GO:0003899: DNA-directed 5'-3' RNA polymerase activity3.04E-03
19GO:0022857: transmembrane transporter activity3.71E-03
20GO:0046982: protein heterodimerization activity7.49E-03
21GO:0050660: flavin adenine dinucleotide binding8.41E-03
22GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.00E-02
23GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.08E-02
24GO:0003700: transcription factor activity, sequence-specific DNA binding1.45E-02
25GO:0043565: sequence-specific DNA binding1.65E-02
26GO:0005507: copper ion binding2.24E-02
27GO:0005516: calmodulin binding2.33E-02
28GO:0044212: transcription regulatory region DNA binding2.88E-02
29GO:0046872: metal ion binding3.20E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]8.12E-06
2GO:0005960: glycine cleavage complex6.14E-05
3GO:0009507: chloroplast2.75E-04
4GO:0030095: chloroplast photosystem II5.39E-04
5GO:0009654: photosystem II oxygen evolving complex7.09E-04
6GO:0019898: extrinsic component of membrane1.13E-03
7GO:0010319: stromule1.39E-03
8GO:0009707: chloroplast outer membrane1.79E-03
9GO:0005747: mitochondrial respiratory chain complex I3.48E-03
10GO:0009543: chloroplast thylakoid lumen4.50E-03
11GO:0005623: cell4.58E-03
12GO:0005759: mitochondrial matrix5.26E-03
13GO:0009535: chloroplast thylakoid membrane7.20E-03
14GO:0031969: chloroplast membrane8.82E-03
15GO:0009579: thylakoid1.98E-02
16GO:0009534: chloroplast thylakoid1.99E-02
17GO:0009570: chloroplast stroma2.12E-02
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Gene type



Gene DE type