co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G69870

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0098755: maintenance of seed dormancy by absisic acid	0.00E+00
2	GO:0039694: viral RNA genome replication	0.00E+00
3	GO:0060154: cellular process regulating host cell cycle in response to virus	0.00E+00
4	GO:0007141: male meiosis I	0.00E+00
5	GO:0006990: positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response	0.00E+00
6	GO:0002191: cap-dependent translational initiation	0.00E+00
7	GO:0010499: proteasomal ubiquitin-independent protein catabolic process	0.00E+00
8	GO:0010398: xylogalacturonan metabolic process	0.00E+00
9	GO:0006805: xenobiotic metabolic process	8.78E-05
10	GO:0048508: embryonic meristem development	8.78E-05
11	GO:0006212: uracil catabolic process	2.08E-04
12	GO:0030010: establishment of cell polarity	2.08E-04
13	GO:0009945: radial axis specification	2.08E-04
14	GO:0051258: protein polymerization	2.08E-04
15	GO:0019483: beta-alanine biosynthetic process	2.08E-04
16	GO:0010155: regulation of proton transport	2.08E-04
17	GO:0051262: protein tetramerization	2.08E-04
18	GO:0010359: regulation of anion channel activity	3.48E-04
19	GO:0061158: 3'-UTR-mediated mRNA destabilization	3.48E-04
20	GO:0072583: clathrin-dependent endocytosis	5.01E-04
21	GO:0006986: response to unfolded protein	5.01E-04
22	GO:0001676: long-chain fatty acid metabolic process	5.01E-04
23	GO:0048194: Golgi vesicle budding	5.01E-04
24	GO:0033320: UDP-D-xylose biosynthetic process	6.66E-04
25	GO:0098719: sodium ion import across plasma membrane	8.44E-04
26	GO:0009615: response to virus	9.37E-04
27	GO:0048232: male gamete generation	1.03E-03
28	GO:0070814: hydrogen sulfide biosynthetic process	1.03E-03
29	GO:0042732: D-xylose metabolic process	1.03E-03
30	GO:1902456: regulation of stomatal opening	1.03E-03
31	GO:1900425: negative regulation of defense response to bacterium	1.03E-03
32	GO:0001731: formation of translation preinitiation complex	1.03E-03
33	GO:0006751: glutathione catabolic process	1.03E-03
34	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.23E-03
35	GO:0000911: cytokinesis by cell plate formation	1.23E-03
36	GO:0009942: longitudinal axis specification	1.23E-03
37	GO:0015977: carbon fixation	1.23E-03
38	GO:0043090: amino acid import	1.44E-03
39	GO:0050790: regulation of catalytic activity	1.44E-03
40	GO:0009819: drought recovery	1.66E-03
41	GO:1900150: regulation of defense response to fungus	1.66E-03
42	GO:0006002: fructose 6-phosphate metabolic process	1.89E-03
43	GO:0009880: embryonic pattern specification	1.89E-03
44	GO:0030968: endoplasmic reticulum unfolded protein response	1.89E-03
45	GO:0043562: cellular response to nitrogen levels	1.89E-03
46	GO:0009821: alkaloid biosynthetic process	2.14E-03
47	GO:0042761: very long-chain fatty acid biosynthetic process	2.39E-03
48	GO:0051453: regulation of intracellular pH	2.39E-03
49	GO:0010629: negative regulation of gene expression	2.65E-03
50	GO:0006995: cellular response to nitrogen starvation	2.65E-03
51	GO:0051026: chiasma assembly	2.65E-03
52	GO:0000103: sulfate assimilation	2.65E-03
53	GO:0051603: proteolysis involved in cellular protein catabolic process	2.70E-03
54	GO:0072593: reactive oxygen species metabolic process	2.93E-03
55	GO:0006468: protein phosphorylation	3.04E-03
56	GO:0010582: floral meristem determinacy	3.21E-03
57	GO:0042742: defense response to bacterium	3.58E-03
58	GO:0006446: regulation of translational initiation	3.80E-03
59	GO:0009225: nucleotide-sugar metabolic process	4.10E-03
60	GO:0009825: multidimensional cell growth	4.10E-03
61	GO:0010053: root epidermal cell differentiation	4.10E-03
62	GO:0034976: response to endoplasmic reticulum stress	4.42E-03
63	GO:0000027: ribosomal large subunit assembly	4.74E-03
64	GO:0061077: chaperone-mediated protein folding	5.42E-03
65	GO:0007131: reciprocal meiotic recombination	5.76E-03
66	GO:0080092: regulation of pollen tube growth	5.76E-03
67	GO:0006012: galactose metabolic process	6.12E-03
68	GO:0010501: RNA secondary structure unwinding	7.24E-03
69	GO:0045489: pectin biosynthetic process	7.62E-03
70	GO:0048544: recognition of pollen	8.02E-03
71	GO:0006814: sodium ion transport	8.02E-03
72	GO:0006623: protein targeting to vacuole	8.42E-03
73	GO:0010183: pollen tube guidance	8.42E-03
74	GO:0010193: response to ozone	8.83E-03
75	GO:0000302: response to reactive oxygen species	8.83E-03
76	GO:0007264: small GTPase mediated signal transduction	9.24E-03
77	GO:0009826: unidimensional cell growth	9.46E-03
78	GO:0030163: protein catabolic process	9.67E-03
79	GO:0019760: glucosinolate metabolic process	1.01E-02
80	GO:0006914: autophagy	1.01E-02
81	GO:0006310: DNA recombination	1.01E-02
82	GO:0071805: potassium ion transmembrane transport	1.05E-02
83	GO:0051607: defense response to virus	1.10E-02
84	GO:0001666: response to hypoxia	1.14E-02
85	GO:0010029: regulation of seed germination	1.19E-02
86	GO:0006499: N-terminal protein myristoylation	1.48E-02
87	GO:0009407: toxin catabolic process	1.48E-02
88	GO:0048527: lateral root development	1.53E-02
89	GO:0010119: regulation of stomatal movement	1.53E-02
90	GO:0010043: response to zinc ion	1.53E-02
91	GO:0006865: amino acid transport	1.58E-02
92	GO:0071555: cell wall organization	1.58E-02
93	GO:0006099: tricarboxylic acid cycle	1.68E-02
94	GO:0006631: fatty acid metabolic process	1.84E-02
95	GO:0009636: response to toxic substance	2.12E-02
96	GO:0009651: response to salt stress	2.22E-02
97	GO:0006260: DNA replication	2.24E-02
98	GO:0006364: rRNA processing	2.41E-02
99	GO:0009736: cytokinin-activated signaling pathway	2.41E-02
100	GO:0005975: carbohydrate metabolic process	2.67E-02
101	GO:0006096: glycolytic process	2.72E-02
102	GO:0046686: response to cadmium ion	2.75E-02
103	GO:0009620: response to fungus	2.91E-02
104	GO:0009735: response to cytokinin	2.93E-02
105	GO:0009553: embryo sac development	3.04E-02
106	GO:0009738: abscisic acid-activated signaling pathway	3.10E-02
107	GO:0018105: peptidyl-serine phosphorylation	3.17E-02
108	GO:0006396: RNA processing	3.17E-02
109	GO:0051726: regulation of cell cycle	3.23E-02
110	GO:0009058: biosynthetic process	3.78E-02
111	GO:0009845: seed germination	3.85E-02
112	GO:0042744: hydrogen peroxide catabolic process	3.99E-02
113	GO:0009790: embryo development	4.06E-02
114	GO:0006413: translational initiation	4.35E-02
115	GO:0016036: cellular response to phosphate starvation	4.35E-02
116	GO:0040008: regulation of growth	4.43E-02
117	GO:0010150: leaf senescence	4.58E-02
118	GO:0006952: defense response	4.62E-02
119	GO:0016310: phosphorylation	4.82E-02

Rank	GO Term	Adjusted P value
1	GO:0070577: lysine-acetylated histone binding	0.00E+00
2	GO:0098808: mRNA cap binding	0.00E+00
3	GO:0004157: dihydropyrimidinase activity	0.00E+00
4	GO:0016504: peptidase activator activity	0.00E+00
5	GO:0102983: xylogalacturonan beta-1,3-xylosyltransferase activity	0.00E+00
6	GO:0015370: solute:sodium symporter activity	0.00E+00
7	GO:0004557: alpha-galactosidase activity	1.58E-06
8	GO:0052692: raffinose alpha-galactosidase activity	1.58E-06
9	GO:0005524: ATP binding	6.82E-05
10	GO:0034450: ubiquitin-ubiquitin ligase activity	8.78E-05
11	GO:0032050: clathrin heavy chain binding	8.78E-05
12	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	1.68E-04
13	GO:0008964: phosphoenolpyruvate carboxylase activity	3.48E-04
14	GO:0003840: gamma-glutamyltransferase activity	3.48E-04
15	GO:0036374: glutathione hydrolase activity	3.48E-04
16	GO:0004781: sulfate adenylyltransferase (ATP) activity	3.48E-04
17	GO:0016756: glutathione gamma-glutamylcysteinyltransferase activity	5.01E-04
18	GO:0031176: endo-1,4-beta-xylanase activity	5.01E-04
19	GO:0070628: proteasome binding	6.66E-04
20	GO:0015204: urea transmembrane transporter activity	6.66E-04
21	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	8.44E-04
22	GO:0031593: polyubiquitin binding	1.03E-03
23	GO:0035252: UDP-xylosyltransferase activity	1.03E-03
24	GO:0048040: UDP-glucuronate decarboxylase activity	1.03E-03
25	GO:0102391: decanoate--CoA ligase activity	1.23E-03
26	GO:0004012: phospholipid-translocating ATPase activity	1.23E-03
27	GO:0003978: UDP-glucose 4-epimerase activity	1.23E-03
28	GO:0004602: glutathione peroxidase activity	1.23E-03
29	GO:0070403: NAD+ binding	1.23E-03
30	GO:0003872: 6-phosphofructokinase activity	1.44E-03
31	GO:0043295: glutathione binding	1.44E-03
32	GO:0004467: long-chain fatty acid-CoA ligase activity	1.44E-03
33	GO:0015293: symporter activity	2.18E-03
34	GO:0016301: kinase activity	2.19E-03
35	GO:0016844: strictosidine synthase activity	2.39E-03
36	GO:0003899: DNA-directed 5'-3' RNA polymerase activity	2.61E-03
37	GO:0004713: protein tyrosine kinase activity	2.65E-03
38	GO:0015386: potassium:proton antiporter activity	2.93E-03
39	GO:0001054: RNA polymerase I activity	2.93E-03
40	GO:0008026: ATP-dependent helicase activity	3.91E-03
41	GO:0004190: aspartic-type endopeptidase activity	4.10E-03
42	GO:0043130: ubiquitin binding	4.74E-03
43	GO:0005528: FK506 binding	4.74E-03
44	GO:0003727: single-stranded RNA binding	6.48E-03
45	GO:0047134: protein-disulfide reductase activity	6.86E-03
46	GO:0004791: thioredoxin-disulfide reductase activity	8.02E-03
47	GO:0004197: cysteine-type endopeptidase activity	9.24E-03
48	GO:0000287: magnesium ion binding	9.65E-03
49	GO:0015385: sodium:proton antiporter activity	9.67E-03
50	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.05E-02
51	GO:0051213: dioxygenase activity	1.14E-02
52	GO:0009931: calcium-dependent protein serine/threonine kinase activity	1.24E-02
53	GO:0004674: protein serine/threonine kinase activity	1.26E-02
54	GO:0004004: ATP-dependent RNA helicase activity	1.28E-02
55	GO:0004683: calmodulin-dependent protein kinase activity	1.28E-02
56	GO:0005515: protein binding	1.49E-02
57	GO:0004722: protein serine/threonine phosphatase activity	1.61E-02
58	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.63E-02
59	GO:0003697: single-stranded DNA binding	1.63E-02
60	GO:0003993: acid phosphatase activity	1.68E-02
61	GO:0004712: protein serine/threonine/tyrosine kinase activity	1.74E-02
62	GO:0004364: glutathione transferase activity	1.90E-02
63	GO:0005198: structural molecule activity	2.12E-02
64	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	2.18E-02
65	GO:0004842: ubiquitin-protein transferase activity	2.37E-02
66	GO:0015171: amino acid transmembrane transporter activity	2.60E-02
67	GO:0031625: ubiquitin protein ligase binding	2.60E-02
68	GO:0008234: cysteine-type peptidase activity	2.60E-02
69	GO:0016874: ligase activity	2.97E-02
70	GO:0000166: nucleotide binding	3.21E-02
71	GO:0004386: helicase activity	3.30E-02
72	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	3.71E-02
73	GO:0030246: carbohydrate binding	4.30E-02

Rank	GO Term	Adjusted P value
1	GO:0019034: viral replication complex	0.00E+00
2	GO:0005773: vacuole	9.12E-05
3	GO:0005829: cytosol	3.24E-04
4	GO:0005945: 6-phosphofructokinase complex	8.44E-04
5	GO:0016282: eukaryotic 43S preinitiation complex	1.03E-03
6	GO:0000151: ubiquitin ligase complex	1.21E-03
7	GO:0033290: eukaryotic 48S preinitiation complex	1.23E-03
8	GO:0016272: prefoldin complex	1.23E-03
9	GO:0048046: apoplast	2.12E-03
10	GO:0005736: DNA-directed RNA polymerase I complex	2.14E-03
11	GO:0005783: endoplasmic reticulum	2.44E-03
12	GO:0017119: Golgi transport complex	2.65E-03
13	GO:0030125: clathrin vesicle coat	2.65E-03
14	GO:0048471: perinuclear region of cytoplasm	2.93E-03
15	GO:0005764: lysosome	3.80E-03
16	GO:0043234: protein complex	4.42E-03
17	GO:0005839: proteasome core complex	5.42E-03
18	GO:0005886: plasma membrane	6.17E-03
19	GO:0030136: clathrin-coated vesicle	6.86E-03
20	GO:0000790: nuclear chromatin	6.86E-03
21	GO:0032580: Golgi cisterna membrane	1.01E-02
22	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	1.08E-02
23	GO:0030529: intracellular ribonucleoprotein complex	1.14E-02
24	GO:0005802: trans-Golgi network	1.17E-02
25	GO:0005768: endosome	1.38E-02
26	GO:0005737: cytoplasm	1.71E-02
27	GO:0005794: Golgi apparatus	1.84E-02
28	GO:0005887: integral component of plasma membrane	2.45E-02
29	GO:0005635: nuclear envelope	2.53E-02
30	GO:0005789: endoplasmic reticulum membrane	2.69E-02
31	GO:0010008: endosome membrane	2.78E-02
32	GO:0012505: endomembrane system	3.04E-02
33	GO:0005654: nucleoplasm	3.57E-02
34	GO:0005777: peroxisome	3.68E-02
35	GO:0005615: extracellular space	4.95E-02