co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68830

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:1902171: regulation of tocopherol cyclase activity	0.00E+00
2	GO:0046677: response to antibiotic	0.00E+00
3	GO:0048438: floral whorl development	8.12E-06
4	GO:0006741: NADP biosynthetic process	2.19E-05
5	GO:0050992: dimethylallyl diphosphate biosynthetic process	2.19E-05
6	GO:0055129: L-proline biosynthetic process	2.19E-05
7	GO:0048575: short-day photoperiodism, flowering	3.99E-05
8	GO:0019674: NAD metabolic process	3.99E-05
9	GO:0019363: pyridine nucleotide biosynthetic process	6.14E-05
10	GO:0010114: response to red light	9.77E-05
11	GO:0016123: xanthophyll biosynthetic process	1.12E-04
12	GO:0006561: proline biosynthetic process	1.41E-04
13	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	1.41E-04
14	GO:0010076: maintenance of floral meristem identity	1.71E-04
15	GO:0050821: protein stabilization	2.37E-04
16	GO:0010100: negative regulation of photomorphogenesis	2.71E-04
17	GO:0071482: cellular response to light stimulus	2.71E-04
18	GO:0010206: photosystem II repair	3.07E-04
19	GO:0009688: abscisic acid biosynthetic process	3.81E-04
20	GO:0010582: floral meristem determinacy	4.58E-04
21	GO:2000028: regulation of photoperiodism, flowering	4.98E-04
22	GO:0009266: response to temperature stimulus	5.39E-04
23	GO:0034976: response to endoplasmic reticulum stress	6.22E-04
24	GO:0010017: red or far-red light signaling pathway	7.99E-04
25	GO:0010182: sugar mediated signaling pathway	1.03E-03
26	GO:0016310: phosphorylation	1.06E-03
27	GO:0030163: protein catabolic process	1.29E-03
28	GO:0010218: response to far red light	1.91E-03
29	GO:0009910: negative regulation of flower development	1.97E-03
30	GO:0006865: amino acid transport	2.04E-03
31	GO:0009637: response to blue light	2.10E-03
32	GO:0009640: photomorphogenesis	2.49E-03
33	GO:0000165: MAPK cascade	2.83E-03
34	GO:0042538: hyperosmotic salinity response	2.90E-03
35	GO:0009585: red, far-red light phototransduction	3.04E-03
36	GO:0009909: regulation of flower development	3.26E-03
37	GO:0009624: response to nematode	3.86E-03
38	GO:0055114: oxidation-reduction process	6.04E-03
39	GO:0045944: positive regulation of transcription from RNA polymerase II promoter	7.20E-03
40	GO:0009658: chloroplast organization	7.59E-03
41	GO:0006970: response to osmotic stress	8.00E-03
42	GO:0044550: secondary metabolite biosynthetic process	9.35E-03
43	GO:0006508: proteolysis	9.88E-03
44	GO:0045454: cell redox homeostasis	1.00E-02
45	GO:0045892: negative regulation of transcription, DNA-templated	1.01E-02
46	GO:0009408: response to heat	1.16E-02
47	GO:0009735: response to cytokinin	1.63E-02
48	GO:0009416: response to light stimulus	1.74E-02
49	GO:0009555: pollen development	1.74E-02
50	GO:0006457: protein folding	2.09E-02
51	GO:0006468: protein phosphorylation	2.50E-02
52	GO:0009414: response to water deprivation	2.83E-02
53	GO:0030154: cell differentiation	3.06E-02
54	GO:0006810: transport	3.79E-02
55	GO:0005975: carbohydrate metabolic process	3.88E-02
56	GO:0009737: response to abscisic acid	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0051745: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity	0.00E+00
2	GO:0009540: zeaxanthin epoxidase [overall] activity	0.00E+00
3	GO:0004462: lactoylglutathione lyase activity	3.63E-07
4	GO:0046429: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity	8.12E-06
5	GO:0004349: glutamate 5-kinase activity	8.12E-06
6	GO:0004350: glutamate-5-semialdehyde dehydrogenase activity	8.12E-06
7	GO:0019172: glyoxalase III activity	2.19E-05
8	GO:0004103: choline kinase activity	2.19E-05
9	GO:0000900: translation repressor activity, nucleic acid binding	3.99E-05
10	GO:0005275: amine transmembrane transporter activity	1.12E-04
11	GO:0051538: 3 iron, 4 sulfur cluster binding	1.12E-04
12	GO:0016829: lyase activity	2.70E-04
13	GO:0003951: NAD+ kinase activity	2.71E-04
14	GO:0071949: FAD binding	3.07E-04
15	GO:0003954: NADH dehydrogenase activity	6.66E-04
16	GO:0004176: ATP-dependent peptidase activity	7.53E-04
17	GO:0003756: protein disulfide isomerase activity	8.91E-04
18	GO:0008236: serine-type peptidase activity	1.73E-03
19	GO:0005524: ATP binding	2.00E-03
20	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.58E-03
21	GO:0004672: protein kinase activity	4.73E-03
22	GO:0004252: serine-type endopeptidase activity	4.83E-03
23	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	4.92E-03
24	GO:0042802: identical protein binding	6.62E-03
25	GO:0008233: peptidase activity	8.71E-03
26	GO:0004497: monooxygenase activity	8.82E-03
27	GO:0004871: signal transducer activity	1.03E-02
28	GO:0016887: ATPase activity	1.58E-02
29	GO:0019825: oxygen binding	2.24E-02
30	GO:0005516: calmodulin binding	2.33E-02
31	GO:0005506: iron ion binding	2.85E-02
32	GO:0003824: catalytic activity	3.08E-02
33	GO:0005215: transporter activity	3.10E-02
34	GO:0046983: protein dimerization activity	3.54E-02
35	GO:0020037: heme binding	3.99E-02

Rank	GO Term	Adjusted P value
1	GO:0031304: intrinsic component of mitochondrial inner membrane	2.19E-05
2	GO:0016605: PML body	3.99E-05
3	GO:0009507: chloroplast	2.75E-04
4	GO:0016604: nuclear body	3.43E-04
5	GO:0031977: thylakoid lumen	2.36E-03
6	GO:0016607: nuclear speck	3.48E-03
7	GO:0005834: heterotrimeric G-protein complex	3.56E-03
8	GO:0009706: chloroplast inner membrane	3.86E-03
9	GO:0010287: plastoglobule	4.34E-03
10	GO:0009543: chloroplast thylakoid lumen	4.50E-03
11	GO:0009535: chloroplast thylakoid membrane	7.20E-03
12	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	8.10E-03
13	GO:0031969: chloroplast membrane	8.82E-03
14	GO:0009941: chloroplast envelope	1.52E-02
15	GO:0005777: peroxisome	1.92E-02
16	GO:0009579: thylakoid	1.98E-02
17	GO:0009534: chloroplast thylakoid	1.99E-02
18	GO:0009570: chloroplast stroma	2.12E-02
19	GO:0009536: plastid	3.33E-02