co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G68710

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0072321: chaperone-mediated protein transport	0.00E+00
2	GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	0.00E+00
3	GO:0002191: cap-dependent translational initiation	0.00E+00
4	GO:2000072: regulation of defense response to fungus, incompatible interaction	2.01E-06
5	GO:0001676: long-chain fatty acid metabolic process	1.69E-05
6	GO:0060548: negative regulation of cell death	3.11E-05
7	GO:0000460: maturation of 5.8S rRNA	3.11E-05
8	GO:0006468: protein phosphorylation	3.36E-05
9	GO:0000470: maturation of LSU-rRNA	7.36E-05
10	GO:0045454: cell redox homeostasis	7.37E-05
11	GO:0007166: cell surface receptor signaling pathway	1.19E-04
12	GO:0009968: negative regulation of signal transduction	2.06E-04
13	GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine	2.06E-04
14	GO:0000077: DNA damage checkpoint	2.06E-04
15	GO:0043547: positive regulation of GTPase activity	2.06E-04
16	GO:0006422: aspartyl-tRNA aminoacylation	2.06E-04
17	GO:0043687: post-translational protein modification	2.06E-04
18	GO:0006680: glucosylceramide catabolic process	2.06E-04
19	GO:0006996: organelle organization	4.62E-04
20	GO:0002221: pattern recognition receptor signaling pathway	4.62E-04
21	GO:0015709: thiosulfate transport	4.62E-04
22	GO:0015914: phospholipid transport	4.62E-04
23	GO:0071422: succinate transmembrane transport	4.62E-04
24	GO:0040020: regulation of meiotic nuclear division	4.62E-04
25	GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	4.62E-04
26	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	4.62E-04
27	GO:0051252: regulation of RNA metabolic process	4.62E-04
28	GO:0045087: innate immune response	6.01E-04
29	GO:0072661: protein targeting to plasma membrane	7.52E-04
30	GO:0006517: protein deglycosylation	7.52E-04
31	GO:0045039: protein import into mitochondrial inner membrane	7.52E-04
32	GO:1900140: regulation of seedling development	7.52E-04
33	GO:0034976: response to endoplasmic reticulum stress	7.70E-04
34	GO:0015031: protein transport	8.18E-04
35	GO:0000027: ribosomal large subunit assembly	8.52E-04
36	GO:0015992: proton transport	1.02E-03
37	GO:0000187: activation of MAPK activity	1.07E-03
38	GO:0048194: Golgi vesicle budding	1.07E-03
39	GO:0015729: oxaloacetate transport	1.07E-03
40	GO:0072583: clathrin-dependent endocytosis	1.07E-03
41	GO:0071323: cellular response to chitin	1.07E-03
42	GO:0010227: floral organ abscission	1.21E-03
43	GO:2000038: regulation of stomatal complex development	1.43E-03
44	GO:0031087: deadenylation-independent decapping of nuclear-transcribed mRNA	1.43E-03
45	GO:0080142: regulation of salicylic acid biosynthetic process	1.43E-03
46	GO:0071423: malate transmembrane transport	1.81E-03
47	GO:0018279: protein N-linked glycosylation via asparagine	1.81E-03
48	GO:0016192: vesicle-mediated transport	1.86E-03
49	GO:0006623: protein targeting to vacuole	1.91E-03
50	GO:0010183: pollen tube guidance	1.91E-03
51	GO:0009749: response to glucose	1.91E-03
52	GO:0010193: response to ozone	2.04E-03
53	GO:0010405: arabinogalactan protein metabolic process	2.24E-03
54	GO:0001731: formation of translation preinitiation complex	2.24E-03
55	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	2.24E-03
56	GO:0047484: regulation of response to osmotic stress	2.24E-03
57	GO:0018258: protein O-linked glycosylation via hydroxyproline	2.24E-03
58	GO:0035435: phosphate ion transmembrane transport	2.24E-03
59	GO:0006886: intracellular protein transport	2.37E-03
60	GO:2000037: regulation of stomatal complex patterning	2.69E-03
61	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	2.69E-03
62	GO:0000911: cytokinesis by cell plate formation	2.69E-03
63	GO:0009612: response to mechanical stimulus	2.69E-03
64	GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	2.69E-03
65	GO:0006694: steroid biosynthetic process	2.69E-03
66	GO:0009615: response to virus	2.93E-03
67	GO:0043090: amino acid import	3.16E-03
68	GO:1900056: negative regulation of leaf senescence	3.16E-03
69	GO:0008272: sulfate transport	3.16E-03
70	GO:0006413: translational initiation	3.40E-03
71	GO:0006102: isocitrate metabolic process	3.67E-03
72	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	3.67E-03
73	GO:0006491: N-glycan processing	3.67E-03
74	GO:0000028: ribosomal small subunit assembly	3.67E-03
75	GO:0009699: phenylpropanoid biosynthetic process	4.20E-03
76	GO:0006002: fructose 6-phosphate metabolic process	4.20E-03
77	GO:0006367: transcription initiation from RNA polymerase II promoter	4.20E-03
78	GO:0006261: DNA-dependent DNA replication	4.20E-03
79	GO:0006499: N-terminal protein myristoylation	4.21E-03
80	GO:0046685: response to arsenic-containing substance	4.75E-03
81	GO:0009821: alkaloid biosynthetic process	4.75E-03
82	GO:0010332: response to gamma radiation	4.75E-03
83	GO:0006099: tricarboxylic acid cycle	5.05E-03
84	GO:0043067: regulation of programmed cell death	5.32E-03
85	GO:0048354: mucilage biosynthetic process involved in seed coat development	5.32E-03
86	GO:0006631: fatty acid metabolic process	5.75E-03
87	GO:0010162: seed dormancy process	5.93E-03
88	GO:0000103: sulfate assimilation	5.93E-03
89	GO:0071365: cellular response to auxin stimulus	7.20E-03
90	GO:0015706: nitrate transport	7.20E-03
91	GO:0010229: inflorescence development	7.87E-03
92	GO:0010102: lateral root morphogenesis	7.87E-03
93	GO:0006626: protein targeting to mitochondrion	7.87E-03
94	GO:0080167: response to karrikin	8.52E-03
95	GO:0006446: regulation of translational initiation	8.56E-03
96	GO:0010053: root epidermal cell differentiation	9.27E-03
97	GO:0042343: indole glucosinolate metabolic process	9.27E-03
98	GO:0010167: response to nitrate	9.27E-03
99	GO:0070588: calcium ion transmembrane transport	9.27E-03
100	GO:0046777: protein autophosphorylation	9.28E-03
101	GO:0006417: regulation of translation	9.31E-03
102	GO:0009626: plant-type hypersensitive response	1.06E-02
103	GO:0006487: protein N-linked glycosylation	1.08E-02
104	GO:0009944: polarity specification of adaxial/abaxial axis	1.08E-02
105	GO:0030150: protein import into mitochondrial matrix	1.08E-02
106	GO:0010187: negative regulation of seed germination	1.08E-02
107	GO:0009620: response to fungus	1.09E-02
108	GO:0006457: protein folding	1.10E-02
109	GO:0006874: cellular calcium ion homeostasis	1.15E-02
110	GO:0009553: embryo sac development	1.16E-02
111	GO:0098542: defense response to other organism	1.23E-02
112	GO:0032259: methylation	1.32E-02
113	GO:0031348: negative regulation of defense response	1.32E-02
114	GO:0080092: regulation of pollen tube growth	1.32E-02
115	GO:0009814: defense response, incompatible interaction	1.32E-02
116	GO:0030433: ubiquitin-dependent ERAD pathway	1.32E-02
117	GO:0009294: DNA mediated transformation	1.40E-02
118	GO:0042127: regulation of cell proliferation	1.48E-02
119	GO:0009306: protein secretion	1.48E-02
120	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.57E-02
121	GO:0042147: retrograde transport, endosome to Golgi	1.57E-02
122	GO:0000413: protein peptidyl-prolyl isomerization	1.66E-02
123	GO:0042391: regulation of membrane potential	1.66E-02
124	GO:0008033: tRNA processing	1.66E-02
125	GO:0010182: sugar mediated signaling pathway	1.75E-02
126	GO:0006662: glycerol ether metabolic process	1.75E-02
127	GO:0061025: membrane fusion	1.84E-02
128	GO:0010150: leaf senescence	2.08E-02
129	GO:0030163: protein catabolic process	2.23E-02
130	GO:0010252: auxin homeostasis	2.33E-02
131	GO:0006470: protein dephosphorylation	2.38E-02
132	GO:0010468: regulation of gene expression	2.48E-02
133	GO:0016126: sterol biosynthetic process	2.64E-02
134	GO:0042128: nitrate assimilation	2.86E-02
135	GO:0006906: vesicle fusion	2.86E-02
136	GO:0008219: cell death	3.19E-02
137	GO:0042254: ribosome biogenesis	3.28E-02
138	GO:0010043: response to zinc ion	3.54E-02
139	GO:0006865: amino acid transport	3.66E-02
140	GO:0009867: jasmonic acid mediated signaling pathway	3.78E-02
141	GO:0034599: cellular response to oxidative stress	3.90E-02
142	GO:0046686: response to cadmium ion	4.11E-02
143	GO:0006839: mitochondrial transport	4.15E-02
144	GO:0006887: exocytosis	4.27E-02
145	GO:0044550: secondary metabolite biosynthetic process	4.32E-02
146	GO:0009744: response to sucrose	4.52E-02
147	GO:0051707: response to other organism	4.52E-02
148	GO:0008643: carbohydrate transport	4.78E-02
149	GO:0055114: oxidation-reduction process	4.78E-02

Rank	GO Term	Adjusted P value
1	GO:0050269: coniferyl-aldehyde dehydrogenase activity	0.00E+00
2	GO:0004164: diphthine synthase activity	0.00E+00
3	GO:0050220: prostaglandin-E synthase activity	0.00E+00
4	GO:0098808: mRNA cap binding	0.00E+00
5	GO:0000247: C-8 sterol isomerase activity	0.00E+00
6	GO:0047750: cholestenol delta-isomerase activity	0.00E+00
7	GO:0016301: kinase activity	3.58E-05
8	GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity	5.00E-05
9	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	7.73E-05
10	GO:0000166: nucleotide binding	8.25E-05
11	GO:0102391: decanoate--CoA ligase activity	1.02E-04
12	GO:0005524: ATP binding	1.17E-04
13	GO:0004467: long-chain fatty acid-CoA ligase activity	1.35E-04
14	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.73E-04
15	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	2.06E-04
16	GO:0042134: rRNA primary transcript binding	2.06E-04
17	GO:0032050: clathrin heavy chain binding	2.06E-04
18	GO:0015085: calcium ion transmembrane transporter activity	2.06E-04
19	GO:0004815: aspartate-tRNA ligase activity	2.06E-04
20	GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity	2.06E-04
21	GO:0004348: glucosylceramidase activity	2.06E-04
22	GO:0043021: ribonucleoprotein complex binding	4.62E-04
23	GO:0008428: ribonuclease inhibitor activity	4.62E-04
24	GO:0015117: thiosulfate transmembrane transporter activity	4.62E-04
25	GO:1901677: phosphate transmembrane transporter activity	4.62E-04
26	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	4.62E-04
27	GO:0052692: raffinose alpha-galactosidase activity	7.52E-04
28	GO:0005310: dicarboxylic acid transmembrane transporter activity	7.52E-04
29	GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity	7.52E-04
30	GO:0015141: succinate transmembrane transporter activity	7.52E-04
31	GO:0004557: alpha-galactosidase activity	7.52E-04
32	GO:0033612: receptor serine/threonine kinase binding	1.02E-03
33	GO:0017077: oxidative phosphorylation uncoupler activity	1.07E-03
34	GO:0015131: oxaloacetate transmembrane transporter activity	1.07E-03
35	GO:0009678: hydrogen-translocating pyrophosphatase activity	1.07E-03
36	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.07E-03
37	GO:0003756: protein disulfide isomerase activity	1.32E-03
38	GO:0047134: protein-disulfide reductase activity	1.43E-03
39	GO:0004576: oligosaccharyl transferase activity	1.43E-03
40	GO:0004930: G-protein coupled receptor activity	1.43E-03
41	GO:0004791: thioredoxin-disulfide reductase activity	1.78E-03
42	GO:0002020: protease binding	1.81E-03
43	GO:0008948: oxaloacetate decarboxylase activity	1.81E-03
44	GO:0015035: protein disulfide oxidoreductase activity	1.93E-03
45	GO:1990714: hydroxyproline O-galactosyltransferase activity	2.24E-03
46	GO:0004029: aldehyde dehydrogenase (NAD) activity	2.24E-03
47	GO:0004012: phospholipid-translocating ATPase activity	2.69E-03
48	GO:0004656: procollagen-proline 4-dioxygenase activity	2.69E-03
49	GO:0008565: protein transporter activity	3.10E-03
50	GO:0004427: inorganic diphosphatase activity	3.16E-03
51	GO:0003872: 6-phosphofructokinase activity	3.16E-03
52	GO:0015140: malate transmembrane transporter activity	3.16E-03
53	GO:0030515: snoRNA binding	3.16E-03
54	GO:0008320: protein transmembrane transporter activity	3.16E-03
55	GO:0052747: sinapyl alcohol dehydrogenase activity	3.67E-03
56	GO:0004708: MAP kinase kinase activity	3.67E-03
57	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.82E-03
58	GO:0003743: translation initiation factor activity	4.53E-03
59	GO:0004712: protein serine/threonine/tyrosine kinase activity	5.28E-03
60	GO:0016844: strictosidine synthase activity	5.32E-03
61	GO:0015112: nitrate transmembrane transporter activity	5.32E-03
62	GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity	5.32E-03
63	GO:0004713: protein tyrosine kinase activity	5.93E-03
64	GO:0008168: methyltransferase activity	6.17E-03
65	GO:0005484: SNAP receptor activity	6.23E-03
66	GO:0008794: arsenate reductase (glutaredoxin) activity	6.55E-03
67	GO:0045551: cinnamyl-alcohol dehydrogenase activity	7.20E-03
68	GO:0015116: sulfate transmembrane transporter activity	7.20E-03
69	GO:0008378: galactosyltransferase activity	7.20E-03
70	GO:0005388: calcium-transporting ATPase activity	7.87E-03
71	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	7.87E-03
72	GO:0004190: aspartic-type endopeptidase activity	9.27E-03
73	GO:0030552: cAMP binding	9.27E-03
74	GO:0030553: cGMP binding	9.27E-03
75	GO:0008061: chitin binding	9.27E-03
76	GO:0003712: transcription cofactor activity	9.27E-03
77	GO:0005217: intracellular ligand-gated ion channel activity	9.27E-03
78	GO:0004970: ionotropic glutamate receptor activity	9.27E-03
79	GO:0031418: L-ascorbic acid binding	1.08E-02
80	GO:0003954: NADH dehydrogenase activity	1.08E-02
81	GO:0004407: histone deacetylase activity	1.08E-02
82	GO:0005216: ion channel activity	1.15E-02
83	GO:0004672: protein kinase activity	1.23E-02
84	GO:0004707: MAP kinase activity	1.23E-02
85	GO:0008514: organic anion transmembrane transporter activity	1.48E-02
86	GO:0004674: protein serine/threonine kinase activity	1.53E-02
87	GO:0005249: voltage-gated potassium channel activity	1.66E-02
88	GO:0030551: cyclic nucleotide binding	1.66E-02
89	GO:0004527: exonuclease activity	1.75E-02
90	GO:0030276: clathrin binding	1.75E-02
91	GO:0010181: FMN binding	1.84E-02
92	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	2.23E-02
93	GO:0005515: protein binding	2.34E-02
94	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	2.43E-02
95	GO:0009931: calcium-dependent protein serine/threonine kinase activity	2.86E-02
96	GO:0004683: calmodulin-dependent protein kinase activity	2.97E-02
97	GO:0016798: hydrolase activity, acting on glycosyl bonds	2.97E-02
98	GO:0004721: phosphoprotein phosphatase activity	2.97E-02
99	GO:0005096: GTPase activator activity	3.31E-02
100	GO:0003697: single-stranded DNA binding	3.78E-02
101	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	3.78E-02
102	GO:0000149: SNARE binding	4.02E-02
103	GO:0051539: 4 iron, 4 sulfur cluster binding	4.15E-02
104	GO:0005516: calmodulin binding	4.76E-02
105	GO:0015293: symporter activity	4.91E-02
106	GO:0005198: structural molecule activity	4.91E-02

Rank	GO Term	Adjusted P value
1	GO:0042719: mitochondrial intermembrane space protein transporter complex	0.00E+00
2	GO:0005674: transcription factor TFIIF complex	0.00E+00
3	GO:0000327: lytic vacuole within protein storage vacuole	0.00E+00
4	GO:0005886: plasma membrane	3.17E-07
5	GO:0008250: oligosaccharyltransferase complex	5.00E-05
6	GO:0005794: Golgi apparatus	5.07E-05
7	GO:0016021: integral component of membrane	6.79E-05
8	GO:0030687: preribosome, large subunit precursor	1.35E-04
9	GO:0034388: Pwp2p-containing subcomplex of 90S preribosome	2.06E-04
10	GO:0045252: oxoglutarate dehydrogenase complex	2.06E-04
11	GO:0080008: Cul4-RING E3 ubiquitin ligase complex	2.63E-04
12	GO:0030665: clathrin-coated vesicle membrane	3.11E-04
13	GO:0017119: Golgi transport complex	3.65E-04
14	GO:0005730: nucleolus	4.52E-04
15	GO:0031304: intrinsic component of mitochondrial inner membrane	4.62E-04
16	GO:0070545: PeBoW complex	4.62E-04
17	GO:0031902: late endosome membrane	7.46E-04
18	GO:0046861: glyoxysomal membrane	7.52E-04
19	GO:0005783: endoplasmic reticulum	7.55E-04
20	GO:0005802: trans-Golgi network	1.11E-03
21	GO:0005768: endosome	1.43E-03
22	GO:0005945: 6-phosphofructokinase complex	1.81E-03
23	GO:0005829: cytosol	1.87E-03
24	GO:0009504: cell plate	1.91E-03
25	GO:0009506: plasmodesma	2.05E-03
26	GO:0030904: retromer complex	2.24E-03
27	GO:0016282: eukaryotic 43S preinitiation complex	2.24E-03
28	GO:0005774: vacuolar membrane	2.52E-03
29	GO:0016363: nuclear matrix	2.69E-03
30	GO:0033290: eukaryotic 48S preinitiation complex	2.69E-03
31	GO:0005788: endoplasmic reticulum lumen	3.10E-03
32	GO:0033116: endoplasmic reticulum-Golgi intermediate compartment membrane	3.16E-03
33	GO:0030131: clathrin adaptor complex	3.67E-03
34	GO:0019005: SCF ubiquitin ligase complex	3.82E-03
35	GO:0005789: endoplasmic reticulum membrane	4.08E-03
36	GO:0000326: protein storage vacuole	4.20E-03
37	GO:0009514: glyoxysome	4.20E-03
38	GO:0031901: early endosome membrane	4.75E-03
39	GO:0005887: integral component of plasma membrane	4.95E-03
40	GO:0030125: clathrin vesicle coat	5.93E-03
41	GO:0005773: vacuole	6.91E-03
42	GO:0032040: small-subunit processome	7.20E-03
43	GO:0016020: membrane	9.89E-03
44	GO:0005834: heterotrimeric G-protein complex	1.06E-02
45	GO:0000139: Golgi membrane	1.07E-02
46	GO:0005758: mitochondrial intermembrane space	1.08E-02
47	GO:0005743: mitochondrial inner membrane	1.28E-02
48	GO:0005744: mitochondrial inner membrane presequence translocase complex	1.48E-02
49	GO:0019898: extrinsic component of membrane	1.94E-02
50	GO:0032580: Golgi cisterna membrane	2.33E-02
51	GO:0000932: P-body	2.64E-02
52	GO:0009707: chloroplast outer membrane	3.19E-02
53	GO:0005777: peroxisome	3.42E-02
54	GO:0031201: SNARE complex	4.27E-02
55	GO:0090406: pollen tube	4.52E-02