GO Enrichment Analysis of Co-expressed Genes with
AT1G68590
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0006780: uroporphyrinogen III biosynthetic process | 0.00E+00 |
| 3 | GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation | 0.00E+00 |
| 4 | GO:0006412: translation | 1.50E-17 |
| 5 | GO:0009735: response to cytokinin | 1.74E-11 |
| 6 | GO:0042254: ribosome biogenesis | 3.09E-11 |
| 7 | GO:0032544: plastid translation | 1.35E-08 |
| 8 | GO:0010207: photosystem II assembly | 1.29E-05 |
| 9 | GO:0010236: plastoquinone biosynthetic process | 2.79E-05 |
| 10 | GO:0042372: phylloquinone biosynthetic process | 5.87E-05 |
| 11 | GO:0000413: protein peptidyl-prolyl isomerization | 6.07E-05 |
| 12 | GO:0009772: photosynthetic electron transport in photosystem II | 7.88E-05 |
| 13 | GO:0042371: vitamin K biosynthetic process | 1.46E-04 |
| 14 | GO:1902458: positive regulation of stomatal opening | 1.46E-04 |
| 15 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 1.46E-04 |
| 16 | GO:0060627: regulation of vesicle-mediated transport | 1.46E-04 |
| 17 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.46E-04 |
| 18 | GO:0010442: guard cell morphogenesis | 1.46E-04 |
| 19 | GO:1904964: positive regulation of phytol biosynthetic process | 1.46E-04 |
| 20 | GO:0042759: long-chain fatty acid biosynthetic process | 1.46E-04 |
| 21 | GO:0010027: thylakoid membrane organization | 1.61E-04 |
| 22 | GO:0015979: photosynthesis | 1.65E-04 |
| 23 | GO:0015995: chlorophyll biosynthetic process | 2.03E-04 |
| 24 | GO:0009773: photosynthetic electron transport in photosystem I | 2.59E-04 |
| 25 | GO:0018119: peptidyl-cysteine S-nitrosylation | 2.59E-04 |
| 26 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.33E-04 |
| 27 | GO:0052541: plant-type cell wall cellulose metabolic process | 3.33E-04 |
| 28 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.33E-04 |
| 29 | GO:2001295: malonyl-CoA biosynthetic process | 5.47E-04 |
| 30 | GO:0042742: defense response to bacterium | 6.64E-04 |
| 31 | GO:0009411: response to UV | 7.64E-04 |
| 32 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 7.83E-04 |
| 33 | GO:0071484: cellular response to light intensity | 7.83E-04 |
| 34 | GO:0051639: actin filament network formation | 7.83E-04 |
| 35 | GO:0006241: CTP biosynthetic process | 7.83E-04 |
| 36 | GO:0006165: nucleoside diphosphate phosphorylation | 7.83E-04 |
| 37 | GO:0006228: UTP biosynthetic process | 7.83E-04 |
| 38 | GO:0010731: protein glutathionylation | 7.83E-04 |
| 39 | GO:0006424: glutamyl-tRNA aminoacylation | 7.83E-04 |
| 40 | GO:1901332: negative regulation of lateral root development | 7.83E-04 |
| 41 | GO:0055070: copper ion homeostasis | 7.83E-04 |
| 42 | GO:0051764: actin crosslink formation | 1.04E-03 |
| 43 | GO:0006183: GTP biosynthetic process | 1.04E-03 |
| 44 | GO:0000919: cell plate assembly | 1.04E-03 |
| 45 | GO:0031365: N-terminal protein amino acid modification | 1.31E-03 |
| 46 | GO:0048359: mucilage metabolic process involved in seed coat development | 1.31E-03 |
| 47 | GO:0032543: mitochondrial translation | 1.31E-03 |
| 48 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.31E-03 |
| 49 | GO:0010583: response to cyclopentenone | 1.35E-03 |
| 50 | GO:0042549: photosystem II stabilization | 1.61E-03 |
| 51 | GO:0032973: amino acid export | 1.61E-03 |
| 52 | GO:0009854: oxidative photosynthetic carbon pathway | 1.93E-03 |
| 53 | GO:0010555: response to mannitol | 1.93E-03 |
| 54 | GO:0009955: adaxial/abaxial pattern specification | 1.93E-03 |
| 55 | GO:1901259: chloroplast rRNA processing | 1.93E-03 |
| 56 | GO:0017148: negative regulation of translation | 1.93E-03 |
| 57 | GO:0010189: vitamin E biosynthetic process | 1.93E-03 |
| 58 | GO:0043090: amino acid import | 2.27E-03 |
| 59 | GO:0019745: pentacyclic triterpenoid biosynthetic process | 2.27E-03 |
| 60 | GO:0071669: plant-type cell wall organization or biogenesis | 2.27E-03 |
| 61 | GO:0000082: G1/S transition of mitotic cell cycle | 2.27E-03 |
| 62 | GO:0010444: guard mother cell differentiation | 2.27E-03 |
| 63 | GO:0009642: response to light intensity | 2.63E-03 |
| 64 | GO:0006605: protein targeting | 2.63E-03 |
| 65 | GO:2000070: regulation of response to water deprivation | 2.63E-03 |
| 66 | GO:0015996: chlorophyll catabolic process | 3.00E-03 |
| 67 | GO:0007186: G-protein coupled receptor signaling pathway | 3.00E-03 |
| 68 | GO:0006526: arginine biosynthetic process | 3.00E-03 |
| 69 | GO:0015780: nucleotide-sugar transport | 3.40E-03 |
| 70 | GO:0010206: photosystem II repair | 3.40E-03 |
| 71 | GO:0080144: amino acid homeostasis | 3.40E-03 |
| 72 | GO:0006779: porphyrin-containing compound biosynthetic process | 3.81E-03 |
| 73 | GO:0006949: syncytium formation | 4.23E-03 |
| 74 | GO:0006782: protoporphyrinogen IX biosynthetic process | 4.23E-03 |
| 75 | GO:0019538: protein metabolic process | 4.23E-03 |
| 76 | GO:0009409: response to cold | 4.51E-03 |
| 77 | GO:0043085: positive regulation of catalytic activity | 4.67E-03 |
| 78 | GO:0045037: protein import into chloroplast stroma | 5.13E-03 |
| 79 | GO:0006457: protein folding | 5.21E-03 |
| 80 | GO:0006006: glucose metabolic process | 5.60E-03 |
| 81 | GO:0045454: cell redox homeostasis | 5.73E-03 |
| 82 | GO:0006096: glycolytic process | 6.08E-03 |
| 83 | GO:0019253: reductive pentose-phosphate cycle | 6.09E-03 |
| 84 | GO:0046688: response to copper ion | 6.59E-03 |
| 85 | GO:0006071: glycerol metabolic process | 7.10E-03 |
| 86 | GO:0010025: wax biosynthetic process | 7.10E-03 |
| 87 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.10E-03 |
| 88 | GO:0019344: cysteine biosynthetic process | 7.63E-03 |
| 89 | GO:0000027: ribosomal large subunit assembly | 7.63E-03 |
| 90 | GO:0051017: actin filament bundle assembly | 7.63E-03 |
| 91 | GO:0010026: trichome differentiation | 8.18E-03 |
| 92 | GO:0061077: chaperone-mediated protein folding | 8.73E-03 |
| 93 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.89E-03 |
| 94 | GO:0042127: regulation of cell proliferation | 1.05E-02 |
| 95 | GO:0009306: protein secretion | 1.05E-02 |
| 96 | GO:0006633: fatty acid biosynthetic process | 1.15E-02 |
| 97 | GO:0009793: embryo development ending in seed dormancy | 1.15E-02 |
| 98 | GO:0000271: polysaccharide biosynthetic process | 1.17E-02 |
| 99 | GO:0006413: translational initiation | 1.18E-02 |
| 100 | GO:0010182: sugar mediated signaling pathway | 1.24E-02 |
| 101 | GO:0009741: response to brassinosteroid | 1.24E-02 |
| 102 | GO:0006520: cellular amino acid metabolic process | 1.24E-02 |
| 103 | GO:0006662: glycerol ether metabolic process | 1.24E-02 |
| 104 | GO:0007018: microtubule-based movement | 1.30E-02 |
| 105 | GO:0015986: ATP synthesis coupled proton transport | 1.30E-02 |
| 106 | GO:0002229: defense response to oomycetes | 1.43E-02 |
| 107 | GO:0007264: small GTPase mediated signal transduction | 1.50E-02 |
| 108 | GO:0009828: plant-type cell wall loosening | 1.64E-02 |
| 109 | GO:0009658: chloroplast organization | 1.97E-02 |
| 110 | GO:0030244: cellulose biosynthetic process | 2.25E-02 |
| 111 | GO:0018298: protein-chromophore linkage | 2.25E-02 |
| 112 | GO:0009813: flavonoid biosynthetic process | 2.33E-02 |
| 113 | GO:0010311: lateral root formation | 2.33E-02 |
| 114 | GO:0009832: plant-type cell wall biogenesis | 2.33E-02 |
| 115 | GO:0007568: aging | 2.49E-02 |
| 116 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.53E-02 |
| 117 | GO:0009853: photorespiration | 2.66E-02 |
| 118 | GO:0034599: cellular response to oxidative stress | 2.75E-02 |
| 119 | GO:0006631: fatty acid metabolic process | 3.01E-02 |
| 120 | GO:0042542: response to hydrogen peroxide | 3.10E-02 |
| 121 | GO:0009744: response to sucrose | 3.19E-02 |
| 122 | GO:0042546: cell wall biogenesis | 3.28E-02 |
| 123 | GO:0008643: carbohydrate transport | 3.37E-02 |
| 124 | GO:0009664: plant-type cell wall organization | 3.75E-02 |
| 125 | GO:0042538: hyperosmotic salinity response | 3.75E-02 |
| 126 | GO:0009585: red, far-red light phototransduction | 3.94E-02 |
| 127 | GO:0006813: potassium ion transport | 3.94E-02 |
| 128 | GO:0048367: shoot system development | 4.54E-02 |
| 129 | GO:0048316: seed development | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004852: uroporphyrinogen-III synthase activity | 0.00E+00 |
| 2 | GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity | 0.00E+00 |
| 3 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 4 | GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity | 0.00E+00 |
| 5 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 6 | GO:0102245: lupan-3beta,20-diol synthase activity | 0.00E+00 |
| 7 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 8 | GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity | 0.00E+00 |
| 9 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 10 | GO:0003735: structural constituent of ribosome | 1.61E-19 |
| 11 | GO:0019843: rRNA binding | 2.44E-16 |
| 12 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.23E-06 |
| 13 | GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | 3.92E-06 |
| 14 | GO:0051920: peroxiredoxin activity | 5.87E-05 |
| 15 | GO:0016209: antioxidant activity | 1.02E-04 |
| 16 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 1.46E-04 |
| 17 | GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity | 1.46E-04 |
| 18 | GO:0004560: alpha-L-fucosidase activity | 1.46E-04 |
| 19 | GO:0046028: electron transporter, transferring electrons from cytochrome b6/f complex of photosystem II activity | 1.46E-04 |
| 20 | GO:0042389: omega-3 fatty acid desaturase activity | 3.33E-04 |
| 21 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 3.33E-04 |
| 22 | GO:0042300: beta-amyrin synthase activity | 5.47E-04 |
| 23 | GO:0004148: dihydrolipoyl dehydrogenase activity | 5.47E-04 |
| 24 | GO:0005504: fatty acid binding | 5.47E-04 |
| 25 | GO:0004075: biotin carboxylase activity | 5.47E-04 |
| 26 | GO:0045174: glutathione dehydrogenase (ascorbate) activity | 5.47E-04 |
| 27 | GO:0008097: 5S rRNA binding | 7.83E-04 |
| 28 | GO:0001872: (1->3)-beta-D-glucan binding | 7.83E-04 |
| 29 | GO:0004742: dihydrolipoyllysine-residue acetyltransferase activity | 7.83E-04 |
| 30 | GO:0016851: magnesium chelatase activity | 7.83E-04 |
| 31 | GO:0042299: lupeol synthase activity | 7.83E-04 |
| 32 | GO:0004550: nucleoside diphosphate kinase activity | 7.83E-04 |
| 33 | GO:0004659: prenyltransferase activity | 1.04E-03 |
| 34 | GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed | 1.04E-03 |
| 35 | GO:0043495: protein anchor | 1.04E-03 |
| 36 | GO:0045430: chalcone isomerase activity | 1.04E-03 |
| 37 | GO:0046527: glucosyltransferase activity | 1.04E-03 |
| 38 | GO:0003989: acetyl-CoA carboxylase activity | 1.31E-03 |
| 39 | GO:0004040: amidase activity | 1.31E-03 |
| 40 | GO:0016208: AMP binding | 1.61E-03 |
| 41 | GO:0051753: mannan synthase activity | 1.93E-03 |
| 42 | GO:0008235: metalloexopeptidase activity | 2.27E-03 |
| 43 | GO:0019899: enzyme binding | 2.27E-03 |
| 44 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.00E-03 |
| 45 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 3.40E-03 |
| 46 | GO:0008047: enzyme activator activity | 4.23E-03 |
| 47 | GO:0051287: NAD binding | 4.63E-03 |
| 48 | GO:0004177: aminopeptidase activity | 4.67E-03 |
| 49 | GO:0031072: heat shock protein binding | 5.60E-03 |
| 50 | GO:0003777: microtubule motor activity | 5.70E-03 |
| 51 | GO:0005528: FK506 binding | 7.63E-03 |
| 52 | GO:0043424: protein histidine kinase binding | 8.18E-03 |
| 53 | GO:0008324: cation transmembrane transporter activity | 8.18E-03 |
| 54 | GO:0016760: cellulose synthase (UDP-forming) activity | 9.89E-03 |
| 55 | GO:0022891: substrate-specific transmembrane transporter activity | 9.89E-03 |
| 56 | GO:0008514: organic anion transmembrane transporter activity | 1.05E-02 |
| 57 | GO:0047134: protein-disulfide reductase activity | 1.11E-02 |
| 58 | GO:0005199: structural constituent of cell wall | 1.24E-02 |
| 59 | GO:0016538: cyclin-dependent protein serine/threonine kinase regulator activity | 1.24E-02 |
| 60 | GO:0008080: N-acetyltransferase activity | 1.24E-02 |
| 61 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.24E-02 |
| 62 | GO:0004791: thioredoxin-disulfide reductase activity | 1.30E-02 |
| 63 | GO:0008017: microtubule binding | 1.33E-02 |
| 64 | GO:0003743: translation initiation factor activity | 1.48E-02 |
| 65 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.57E-02 |
| 66 | GO:0051015: actin filament binding | 1.57E-02 |
| 67 | GO:0016168: chlorophyll binding | 1.94E-02 |
| 68 | GO:0004601: peroxidase activity | 1.97E-02 |
| 69 | GO:0016788: hydrolase activity, acting on ester bonds | 2.01E-02 |
| 70 | GO:0030247: polysaccharide binding | 2.09E-02 |
| 71 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.17E-02 |
| 72 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.25E-02 |
| 73 | GO:0052689: carboxylic ester hydrolase activity | 2.70E-02 |
| 74 | GO:0050661: NADP binding | 2.92E-02 |
| 75 | GO:0004364: glutathione transferase activity | 3.10E-02 |
| 76 | GO:0051537: 2 iron, 2 sulfur cluster binding | 3.37E-02 |
| 77 | GO:0003924: GTPase activity | 3.60E-02 |
| 78 | GO:0009055: electron carrier activity | 3.86E-02 |
| 79 | GO:0015171: amino acid transmembrane transporter activity | 4.24E-02 |
| 80 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.54E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0030956: glutamyl-tRNA(Gln) amidotransferase complex | 0.00E+00 |
| 2 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 3 | GO:0009507: chloroplast | 1.16E-43 |
| 4 | GO:0009570: chloroplast stroma | 1.62E-42 |
| 5 | GO:0009941: chloroplast envelope | 2.00E-39 |
| 6 | GO:0009579: thylakoid | 5.39E-22 |
| 7 | GO:0005840: ribosome | 1.39E-19 |
| 8 | GO:0009535: chloroplast thylakoid membrane | 5.45E-19 |
| 9 | GO:0009534: chloroplast thylakoid | 4.63E-12 |
| 10 | GO:0031977: thylakoid lumen | 1.44E-11 |
| 11 | GO:0009543: chloroplast thylakoid lumen | 2.33E-11 |
| 12 | GO:0000311: plastid large ribosomal subunit | 8.30E-06 |
| 13 | GO:0030095: chloroplast photosystem II | 1.29E-05 |
| 14 | GO:0015934: large ribosomal subunit | 1.75E-05 |
| 15 | GO:0010319: stromule | 1.36E-04 |
| 16 | GO:0042170: plastid membrane | 3.33E-04 |
| 17 | GO:0009528: plastid inner membrane | 5.47E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 5.47E-04 |
| 19 | GO:0009532: plastid stroma | 6.43E-04 |
| 20 | GO:0022626: cytosolic ribosome | 7.15E-04 |
| 21 | GO:0032432: actin filament bundle | 7.83E-04 |
| 22 | GO:0009536: plastid | 9.93E-04 |
| 23 | GO:0009706: chloroplast inner membrane | 1.01E-03 |
| 24 | GO:0009527: plastid outer membrane | 1.04E-03 |
| 25 | GO:0009523: photosystem II | 1.19E-03 |
| 26 | GO:0055035: plastid thylakoid membrane | 1.31E-03 |
| 27 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.61E-03 |
| 28 | GO:0046658: anchored component of plasma membrane | 2.85E-03 |
| 29 | GO:0005763: mitochondrial small ribosomal subunit | 3.40E-03 |
| 30 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 3.40E-03 |
| 31 | GO:0005874: microtubule | 4.37E-03 |
| 32 | GO:0031969: chloroplast membrane | 4.56E-03 |
| 33 | GO:0005884: actin filament | 4.67E-03 |
| 34 | GO:0022625: cytosolic large ribosomal subunit | 4.86E-03 |
| 35 | GO:0031225: anchored component of membrane | 6.91E-03 |
| 36 | GO:0009654: photosystem II oxygen evolving complex | 8.18E-03 |
| 37 | GO:0042651: thylakoid membrane | 8.18E-03 |
| 38 | GO:0010287: plastoglobule | 8.69E-03 |
| 39 | GO:0015935: small ribosomal subunit | 8.73E-03 |
| 40 | GO:0005871: kinesin complex | 1.11E-02 |
| 41 | GO:0019898: extrinsic component of membrane | 1.37E-02 |
| 42 | GO:0016020: membrane | 1.43E-02 |
| 43 | GO:0009505: plant-type cell wall | 1.44E-02 |
| 44 | GO:0005778: peroxisomal membrane | 1.72E-02 |
| 45 | GO:0009707: chloroplast outer membrane | 2.25E-02 |
| 46 | GO:0048046: apoplast | 2.48E-02 |
| 47 | GO:0005819: spindle | 2.83E-02 |