GO Enrichment Analysis of Co-expressed Genes with
AT1G68560
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:1900000: regulation of anthocyanin catabolic process | 0.00E+00 |
| 3 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 4 | GO:0015995: chlorophyll biosynthetic process | 1.88E-08 |
| 5 | GO:0045490: pectin catabolic process | 2.47E-06 |
| 6 | GO:0010480: microsporocyte differentiation | 6.91E-05 |
| 7 | GO:0031338: regulation of vesicle fusion | 6.91E-05 |
| 8 | GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process | 6.91E-05 |
| 9 | GO:0005980: glycogen catabolic process | 6.91E-05 |
| 10 | GO:0010207: photosystem II assembly | 1.36E-04 |
| 11 | GO:0035304: regulation of protein dephosphorylation | 1.66E-04 |
| 12 | GO:0010541: acropetal auxin transport | 1.66E-04 |
| 13 | GO:0015979: photosynthesis | 2.06E-04 |
| 14 | GO:0080055: low-affinity nitrate transport | 2.81E-04 |
| 15 | GO:0090630: activation of GTPase activity | 2.81E-04 |
| 16 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 2.81E-04 |
| 17 | GO:0010160: formation of animal organ boundary | 2.81E-04 |
| 18 | GO:0048443: stamen development | 3.11E-04 |
| 19 | GO:0042631: cellular response to water deprivation | 3.65E-04 |
| 20 | GO:0009647: skotomorphogenesis | 4.06E-04 |
| 21 | GO:0010306: rhamnogalacturonan II biosynthetic process | 4.06E-04 |
| 22 | GO:0051513: regulation of monopolar cell growth | 4.06E-04 |
| 23 | GO:0080170: hydrogen peroxide transmembrane transport | 4.06E-04 |
| 24 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 4.06E-04 |
| 25 | GO:0030104: water homeostasis | 5.42E-04 |
| 26 | GO:0007623: circadian rhythm | 5.69E-04 |
| 27 | GO:0009913: epidermal cell differentiation | 8.40E-04 |
| 28 | GO:0060918: auxin transport | 8.40E-04 |
| 29 | GO:0042549: photosystem II stabilization | 8.40E-04 |
| 30 | GO:0048437: floral organ development | 1.17E-03 |
| 31 | GO:0050829: defense response to Gram-negative bacterium | 1.17E-03 |
| 32 | GO:0009690: cytokinin metabolic process | 1.34E-03 |
| 33 | GO:0009640: photomorphogenesis | 1.42E-03 |
| 34 | GO:0032544: plastid translation | 1.53E-03 |
| 35 | GO:0010206: photosystem II repair | 1.73E-03 |
| 36 | GO:0006783: heme biosynthetic process | 1.73E-03 |
| 37 | GO:0048589: developmental growth | 1.73E-03 |
| 38 | GO:0009245: lipid A biosynthetic process | 1.73E-03 |
| 39 | GO:0009664: plant-type cell wall organization | 1.78E-03 |
| 40 | GO:0010205: photoinhibition | 1.93E-03 |
| 41 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.14E-03 |
| 42 | GO:0019684: photosynthesis, light reaction | 2.36E-03 |
| 43 | GO:1903507: negative regulation of nucleic acid-templated transcription | 2.36E-03 |
| 44 | GO:0048229: gametophyte development | 2.36E-03 |
| 45 | GO:0010015: root morphogenesis | 2.36E-03 |
| 46 | GO:0010152: pollen maturation | 2.58E-03 |
| 47 | GO:0008361: regulation of cell size | 2.58E-03 |
| 48 | GO:0042545: cell wall modification | 2.61E-03 |
| 49 | GO:0010075: regulation of meristem growth | 2.82E-03 |
| 50 | GO:0010540: basipetal auxin transport | 3.06E-03 |
| 51 | GO:0009266: response to temperature stimulus | 3.06E-03 |
| 52 | GO:0009934: regulation of meristem structural organization | 3.06E-03 |
| 53 | GO:0010020: chloroplast fission | 3.06E-03 |
| 54 | GO:0010030: positive regulation of seed germination | 3.30E-03 |
| 55 | GO:0051017: actin filament bundle assembly | 3.81E-03 |
| 56 | GO:0009735: response to cytokinin | 3.82E-03 |
| 57 | GO:0007017: microtubule-based process | 4.08E-03 |
| 58 | GO:0016998: cell wall macromolecule catabolic process | 4.35E-03 |
| 59 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.63E-03 |
| 60 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.91E-03 |
| 61 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 5.50E-03 |
| 62 | GO:0034220: ion transmembrane transport | 5.80E-03 |
| 63 | GO:0048653: anther development | 5.80E-03 |
| 64 | GO:0042335: cuticle development | 5.80E-03 |
| 65 | GO:0009958: positive gravitropism | 6.11E-03 |
| 66 | GO:0048868: pollen tube development | 6.11E-03 |
| 67 | GO:0048825: cotyledon development | 6.74E-03 |
| 68 | GO:0000302: response to reactive oxygen species | 7.07E-03 |
| 69 | GO:0010583: response to cyclopentenone | 7.40E-03 |
| 70 | GO:0009639: response to red or far red light | 8.08E-03 |
| 71 | GO:0009828: plant-type cell wall loosening | 8.08E-03 |
| 72 | GO:0080167: response to karrikin | 8.84E-03 |
| 73 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 9.15E-03 |
| 74 | GO:0009627: systemic acquired resistance | 9.87E-03 |
| 75 | GO:0010411: xyloglucan metabolic process | 1.02E-02 |
| 76 | GO:0071555: cell wall organization | 1.05E-02 |
| 77 | GO:0000160: phosphorelay signal transduction system | 1.14E-02 |
| 78 | GO:0010218: response to far red light | 1.18E-02 |
| 79 | GO:0048527: lateral root development | 1.22E-02 |
| 80 | GO:0032259: methylation | 1.25E-02 |
| 81 | GO:0009637: response to blue light | 1.30E-02 |
| 82 | GO:0034599: cellular response to oxidative stress | 1.34E-02 |
| 83 | GO:0009926: auxin polar transport | 1.56E-02 |
| 84 | GO:0042546: cell wall biogenesis | 1.60E-02 |
| 85 | GO:0031347: regulation of defense response | 1.78E-02 |
| 86 | GO:0009734: auxin-activated signaling pathway | 1.85E-02 |
| 87 | GO:0009736: cytokinin-activated signaling pathway | 1.92E-02 |
| 88 | GO:0006364: rRNA processing | 1.92E-02 |
| 89 | GO:0006857: oligopeptide transport | 2.02E-02 |
| 90 | GO:0048316: seed development | 2.22E-02 |
| 91 | GO:0009624: response to nematode | 2.47E-02 |
| 92 | GO:0009058: biosynthetic process | 3.01E-02 |
| 93 | GO:0009845: seed germination | 3.07E-02 |
| 94 | GO:0042744: hydrogen peroxide catabolic process | 3.18E-02 |
| 95 | GO:0006633: fatty acid biosynthetic process | 3.41E-02 |
| 96 | GO:0042742: defense response to bacterium | 4.69E-02 |
| 97 | GO:0009826: unidimensional cell growth | 4.84E-02 |
| 98 | GO:0009658: chloroplast organization | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0047513: 1,2-alpha-L-fucosidase activity | 0.00E+00 |
| 3 | GO:0016851: magnesium chelatase activity | 2.48E-06 |
| 4 | GO:0030570: pectate lyase activity | 8.00E-06 |
| 5 | GO:0016829: lyase activity | 3.18E-05 |
| 6 | GO:0004645: phosphorylase activity | 6.91E-05 |
| 7 | GO:0080062: cytokinin 9-beta-glucosyltransferase activity | 6.91E-05 |
| 8 | GO:0047807: cytokinin 7-beta-glucosyltransferase activity | 6.91E-05 |
| 9 | GO:0008184: glycogen phosphorylase activity | 6.91E-05 |
| 10 | GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity | 6.91E-05 |
| 11 | GO:0010242: oxygen evolving activity | 6.91E-05 |
| 12 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 6.91E-05 |
| 13 | GO:0004853: uroporphyrinogen decarboxylase activity | 6.91E-05 |
| 14 | GO:0016630: protochlorophyllide reductase activity | 1.66E-04 |
| 15 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 2.81E-04 |
| 16 | GO:0010011: auxin binding | 5.42E-04 |
| 17 | GO:0017137: Rab GTPase binding | 6.87E-04 |
| 18 | GO:0031177: phosphopantetheine binding | 8.40E-04 |
| 19 | GO:0004130: cytochrome-c peroxidase activity | 8.40E-04 |
| 20 | GO:0005096: GTPase activator activity | 9.34E-04 |
| 21 | GO:0005515: protein binding | 9.62E-04 |
| 22 | GO:0000035: acyl binding | 9.99E-04 |
| 23 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.34E-03 |
| 24 | GO:0045330: aspartyl esterase activity | 2.10E-03 |
| 25 | GO:0004650: polygalacturonase activity | 2.46E-03 |
| 26 | GO:0030599: pectinesterase activity | 2.54E-03 |
| 27 | GO:0031072: heat shock protein binding | 2.82E-03 |
| 28 | GO:0010329: auxin efflux transmembrane transporter activity | 2.82E-03 |
| 29 | GO:0008266: poly(U) RNA binding | 3.06E-03 |
| 30 | GO:0005528: FK506 binding | 3.81E-03 |
| 31 | GO:0003714: transcription corepressor activity | 3.81E-03 |
| 32 | GO:0046910: pectinesterase inhibitor activity | 4.31E-03 |
| 33 | GO:0033612: receptor serine/threonine kinase binding | 4.35E-03 |
| 34 | GO:0003756: protein disulfide isomerase activity | 5.20E-03 |
| 35 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.07E-03 |
| 36 | GO:0000156: phosphorelay response regulator activity | 7.73E-03 |
| 37 | GO:0051015: actin filament binding | 7.73E-03 |
| 38 | GO:0005200: structural constituent of cytoskeleton | 8.42E-03 |
| 39 | GO:0015250: water channel activity | 9.13E-03 |
| 40 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.02E-02 |
| 41 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.38E-02 |
| 42 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.74E-02 |
| 43 | GO:0003777: microtubule motor activity | 2.07E-02 |
| 44 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 2.32E-02 |
| 45 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 2.32E-02 |
| 46 | GO:0016874: ligase activity | 2.37E-02 |
| 47 | GO:0004674: protein serine/threonine kinase activity | 2.43E-02 |
| 48 | GO:0051082: unfolded protein binding | 2.47E-02 |
| 49 | GO:0019843: rRNA binding | 2.90E-02 |
| 50 | GO:0030170: pyridoxal phosphate binding | 3.12E-02 |
| 51 | GO:0004252: serine-type endopeptidase activity | 3.12E-02 |
| 52 | GO:0008194: UDP-glycosyltransferase activity | 3.95E-02 |
| 53 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.32E-02 |
| 54 | GO:0008168: methyltransferase activity | 4.84E-02 |
| 55 | GO:0005524: ATP binding | 4.94E-02 |
| 56 | GO:0004601: peroxidase activity | 4.97E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043224: nuclear SCF ubiquitin ligase complex | 0.00E+00 |
| 2 | GO:0098572: stromal side of plastid thylakoid membrane | 0.00E+00 |
| 3 | GO:0009534: chloroplast thylakoid | 5.79E-15 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 6.20E-09 |
| 5 | GO:0010007: magnesium chelatase complex | 1.03E-06 |
| 6 | GO:0009543: chloroplast thylakoid lumen | 1.06E-06 |
| 7 | GO:0009507: chloroplast | 1.30E-06 |
| 8 | GO:0009570: chloroplast stroma | 1.32E-06 |
| 9 | GO:0031977: thylakoid lumen | 3.68E-06 |
| 10 | GO:0043674: columella | 6.91E-05 |
| 11 | GO:0009579: thylakoid | 1.62E-04 |
| 12 | GO:0005618: cell wall | 3.36E-04 |
| 13 | GO:0009531: secondary cell wall | 4.06E-04 |
| 14 | GO:0042646: plastid nucleoid | 4.06E-04 |
| 15 | GO:0009295: nucleoid | 6.19E-04 |
| 16 | GO:0055035: plastid thylakoid membrane | 6.87E-04 |
| 17 | GO:0016363: nuclear matrix | 9.99E-04 |
| 18 | GO:0042807: central vacuole | 1.17E-03 |
| 19 | GO:0005576: extracellular region | 1.18E-03 |
| 20 | GO:0009538: photosystem I reaction center | 1.34E-03 |
| 21 | GO:0042644: chloroplast nucleoid | 1.73E-03 |
| 22 | GO:0045298: tubulin complex | 1.73E-03 |
| 23 | GO:0009941: chloroplast envelope | 1.84E-03 |
| 24 | GO:0009508: plastid chromosome | 2.82E-03 |
| 25 | GO:0030095: chloroplast photosystem II | 3.06E-03 |
| 26 | GO:0009505: plant-type cell wall | 3.09E-03 |
| 27 | GO:0009654: photosystem II oxygen evolving complex | 4.08E-03 |
| 28 | GO:0015629: actin cytoskeleton | 4.91E-03 |
| 29 | GO:0019898: extrinsic component of membrane | 6.74E-03 |
| 30 | GO:0071944: cell periphery | 7.73E-03 |
| 31 | GO:0005856: cytoskeleton | 1.69E-02 |
| 32 | GO:0016020: membrane | 1.73E-02 |
| 33 | GO:0005886: plasma membrane | 2.37E-02 |
| 34 | GO:0012505: endomembrane system | 2.42E-02 |
| 35 | GO:0010287: plastoglobule | 2.79E-02 |
| 36 | GO:0031225: anchored component of membrane | 3.63E-02 |
| 37 | GO:0009705: plant-type vacuole membrane | 3.65E-02 |
| 38 | GO:0005622: intracellular | 4.12E-02 |
| 39 | GO:0005774: vacuolar membrane | 4.95E-02 |