Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G67750

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006223: uracil salvage0.00E+00
2GO:0010394: homogalacturonan metabolic process0.00E+00
3GO:0007638: mechanosensory behavior0.00E+00
4GO:0070272: proton-transporting ATP synthase complex biogenesis0.00E+00
5GO:0006437: tyrosyl-tRNA aminoacylation0.00E+00
6GO:0015979: photosynthesis1.93E-06
7GO:0006633: fatty acid biosynthetic process8.44E-06
8GO:0006546: glycine catabolic process9.33E-05
9GO:0071555: cell wall organization1.11E-04
10GO:0016120: carotene biosynthetic process1.45E-04
11GO:0010190: cytochrome b6f complex assembly2.07E-04
12GO:0071588: hydrogen peroxide mediated signaling pathway3.94E-04
13GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.94E-04
14GO:0060627: regulation of vesicle-mediated transport3.94E-04
15GO:1904966: positive regulation of vitamin E biosynthetic process3.94E-04
16GO:0010442: guard cell morphogenesis3.94E-04
17GO:0042547: cell wall modification involved in multidimensional cell growth3.94E-04
18GO:1904964: positive regulation of phytol biosynthetic process3.94E-04
19GO:0042371: vitamin K biosynthetic process3.94E-04
20GO:0045488: pectin metabolic process3.94E-04
21GO:1902458: positive regulation of stomatal opening3.94E-04
22GO:0016117: carotenoid biosynthetic process4.06E-04
23GO:0042335: cuticle development4.50E-04
24GO:0000902: cell morphogenesis6.63E-04
25GO:0043039: tRNA aminoacylation8.55E-04
26GO:0052541: plant-type cell wall cellulose metabolic process8.55E-04
27GO:0010115: regulation of abscisic acid biosynthetic process8.55E-04
28GO:1902326: positive regulation of chlorophyll biosynthetic process8.55E-04
29GO:1903426: regulation of reactive oxygen species biosynthetic process8.55E-04
30GO:0019538: protein metabolic process9.10E-04
31GO:0042254: ribosome biogenesis1.27E-03
32GO:0010411: xyloglucan metabolic process1.27E-03
33GO:0030036: actin cytoskeleton organization1.36E-03
34GO:0090506: axillary shoot meristem initiation1.39E-03
35GO:0071492: cellular response to UV-A1.39E-03
36GO:0006696: ergosterol biosynthetic process1.39E-03
37GO:2001295: malonyl-CoA biosynthetic process1.39E-03
38GO:0006833: water transport1.91E-03
39GO:0051016: barbed-end actin filament capping2.00E-03
40GO:0010088: phloem development2.00E-03
41GO:0007231: osmosensory signaling pathway2.00E-03
42GO:0019464: glycine decarboxylation via glycine cleavage system2.69E-03
43GO:0009765: photosynthesis, light harvesting2.69E-03
44GO:0006183: GTP biosynthetic process2.69E-03
45GO:2000122: negative regulation of stomatal complex development2.69E-03
46GO:0033500: carbohydrate homeostasis2.69E-03
47GO:0031122: cytoplasmic microtubule organization2.69E-03
48GO:0044206: UMP salvage2.69E-03
49GO:0010037: response to carbon dioxide2.69E-03
50GO:0009956: radial pattern formation2.69E-03
51GO:0015976: carbon utilization2.69E-03
52GO:0071486: cellular response to high light intensity2.69E-03
53GO:0042546: cell wall biogenesis2.84E-03
54GO:0006869: lipid transport2.89E-03
55GO:0019722: calcium-mediated signaling3.33E-03
56GO:0048359: mucilage metabolic process involved in seed coat development3.44E-03
57GO:0043097: pyrimidine nucleoside salvage3.44E-03
58GO:0045038: protein import into chloroplast thylakoid membrane3.44E-03
59GO:0016123: xanthophyll biosynthetic process3.44E-03
60GO:0005975: carbohydrate metabolic process3.49E-03
61GO:0034220: ion transmembrane transport3.91E-03
62GO:0055114: oxidation-reduction process3.93E-03
63GO:0045489: pectin biosynthetic process4.21E-03
64GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway4.26E-03
65GO:0016554: cytidine to uridine editing4.26E-03
66GO:0006206: pyrimidine nucleobase metabolic process4.26E-03
67GO:0055085: transmembrane transport4.63E-03
68GO:0009955: adaxial/abaxial pattern specification5.13E-03
69GO:0042372: phylloquinone biosynthetic process5.13E-03
70GO:0010067: procambium histogenesis5.13E-03
71GO:0006694: steroid biosynthetic process5.13E-03
72GO:1901259: chloroplast rRNA processing5.13E-03
73GO:0030488: tRNA methylation5.13E-03
74GO:0010019: chloroplast-nucleus signaling pathway5.13E-03
75GO:0016132: brassinosteroid biosynthetic process5.21E-03
76GO:0006412: translation5.42E-03
77GO:0032502: developmental process5.56E-03
78GO:0051693: actin filament capping6.06E-03
79GO:0030497: fatty acid elongation6.06E-03
80GO:0007267: cell-cell signaling6.71E-03
81GO:0007155: cell adhesion7.05E-03
82GO:0042255: ribosome assembly7.05E-03
83GO:2000070: regulation of response to water deprivation7.05E-03
84GO:0045010: actin nucleation7.05E-03
85GO:0016126: sterol biosynthetic process7.54E-03
86GO:0009932: cell tip growth8.09E-03
87GO:0015996: chlorophyll catabolic process8.09E-03
88GO:0007186: G-protein coupled receptor signaling pathway8.09E-03
89GO:0006526: arginine biosynthetic process8.09E-03
90GO:0032544: plastid translation8.09E-03
91GO:0009808: lignin metabolic process8.09E-03
92GO:0009735: response to cytokinin8.31E-03
93GO:0009051: pentose-phosphate shunt, oxidative branch9.18E-03
94GO:0090305: nucleic acid phosphodiester bond hydrolysis9.18E-03
95GO:0010206: photosystem II repair9.18E-03
96GO:0015780: nucleotide-sugar transport9.18E-03
97GO:0045454: cell redox homeostasis9.61E-03
98GO:0018298: protein-chromophore linkage9.86E-03
99GO:1900865: chloroplast RNA modification1.03E-02
100GO:0009870: defense response signaling pathway, resistance gene-dependent1.15E-02
101GO:0043069: negative regulation of programmed cell death1.15E-02
102GO:0048829: root cap development1.15E-02
103GO:0000038: very long-chain fatty acid metabolic process1.28E-02
104GO:0019684: photosynthesis, light reaction1.28E-02
105GO:0006816: calcium ion transport1.28E-02
106GO:0009089: lysine biosynthetic process via diaminopimelate1.28E-02
107GO:0009773: photosynthetic electron transport in photosystem I1.28E-02
108GO:0043085: positive regulation of catalytic activity1.28E-02
109GO:0018119: peptidyl-cysteine S-nitrosylation1.28E-02
110GO:0010015: root morphogenesis1.28E-02
111GO:0034599: cellular response to oxidative stress1.31E-02
112GO:0006790: sulfur compound metabolic process1.41E-02
113GO:0045037: protein import into chloroplast stroma1.41E-02
114GO:0006631: fatty acid metabolic process1.49E-02
115GO:0006006: glucose metabolic process1.54E-02
116GO:0050826: response to freezing1.54E-02
117GO:0009725: response to hormone1.54E-02
118GO:0010143: cutin biosynthetic process1.68E-02
119GO:0010207: photosystem II assembly1.68E-02
120GO:0010020: chloroplast fission1.68E-02
121GO:0009933: meristem structural organization1.68E-02
122GO:0007015: actin filament organization1.68E-02
123GO:0010223: secondary shoot formation1.68E-02
124GO:0008643: carbohydrate transport1.75E-02
125GO:0070588: calcium ion transmembrane transport1.82E-02
126GO:0046854: phosphatidylinositol phosphorylation1.82E-02
127GO:0010025: wax biosynthetic process1.96E-02
128GO:0006636: unsaturated fatty acid biosynthetic process1.96E-02
129GO:0006071: glycerol metabolic process1.96E-02
130GO:0042538: hyperosmotic salinity response2.04E-02
131GO:0009116: nucleoside metabolic process2.11E-02
132GO:0000027: ribosomal large subunit assembly2.11E-02
133GO:0007010: cytoskeleton organization2.11E-02
134GO:0005992: trehalose biosynthetic process2.11E-02
135GO:0006418: tRNA aminoacylation for protein translation2.27E-02
136GO:0010026: trichome differentiation2.27E-02
137GO:0007017: microtubule-based process2.27E-02
138GO:0009768: photosynthesis, light harvesting in photosystem I2.27E-02
139GO:0006857: oligopeptide transport2.34E-02
140GO:0006810: transport2.40E-02
141GO:0061077: chaperone-mediated protein folding2.43E-02
142GO:0003333: amino acid transmembrane transport2.43E-02
143GO:0016998: cell wall macromolecule catabolic process2.43E-02
144GO:0030245: cellulose catabolic process2.59E-02
145GO:0009814: defense response, incompatible interaction2.59E-02
146GO:0009294: DNA mediated transformation2.75E-02
147GO:0040007: growth2.75E-02
148GO:0001944: vasculature development2.75E-02
149GO:0010089: xylem development2.92E-02
150GO:0000271: polysaccharide biosynthetic process3.27E-02
151GO:0000413: protein peptidyl-prolyl isomerization3.27E-02
152GO:0010087: phloem or xylem histogenesis3.27E-02
153GO:0006520: cellular amino acid metabolic process3.45E-02
154GO:0006662: glycerol ether metabolic process3.45E-02
155GO:0010305: leaf vascular tissue pattern formation3.45E-02
156GO:0010182: sugar mediated signaling pathway3.45E-02
157GO:0007018: microtubule-based movement3.63E-02
158GO:0071554: cell wall organization or biogenesis4.01E-02
159GO:0000302: response to reactive oxygen species4.01E-02
160GO:0002229: defense response to oomycetes4.01E-02
161GO:0007264: small GTPase mediated signal transduction4.20E-02
162GO:0010583: response to cyclopentenone4.20E-02
163GO:0010090: trichome morphogenesis4.39E-02
164GO:1901657: glycosyl compound metabolic process4.39E-02
165GO:0042744: hydrogen peroxide catabolic process4.42E-02
RankGO TermAdjusted P value
1GO:0009974: zeinoxanthin epsilon hydroxylase activity0.00E+00
2GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity0.00E+00
3GO:0047450: crotonoyl-[acyl-carrier-protein] hydratase activity0.00E+00
4GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
5GO:0050613: delta14-sterol reductase activity0.00E+00
6GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity0.00E+00
7GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity0.00E+00
8GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity0.00E+00
9GO:0045435: lycopene epsilon cyclase activity0.00E+00
10GO:0046905: phytoene synthase activity0.00E+00
11GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
12GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity0.00E+00
13GO:0019146: arabinose-5-phosphate isomerase activity0.00E+00
14GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
15GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
16GO:0050614: delta24-sterol reductase activity0.00E+00
17GO:0019843: rRNA binding7.91E-10
18GO:0051920: peroxiredoxin activity6.54E-06
19GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity6.94E-06
20GO:0016209: antioxidant activity1.56E-05
21GO:0047259: glucomannan 4-beta-mannosyltransferase activity3.94E-04
22GO:0004560: alpha-L-fucosidase activity3.94E-04
23GO:0080132: fatty acid alpha-hydroxylase activity3.94E-04
24GO:0008568: microtubule-severing ATPase activity3.94E-04
25GO:0004831: tyrosine-tRNA ligase activity3.94E-04
26GO:0051996: squalene synthase activity3.94E-04
27GO:0000248: C-5 sterol desaturase activity3.94E-04
28GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity3.94E-04
29GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.57E-04
30GO:0016762: xyloglucan:xyloglucosyl transferase activity6.51E-04
31GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase8.55E-04
32GO:0004310: farnesyl-diphosphate farnesyltransferase activity8.55E-04
33GO:0042389: omega-3 fatty acid desaturase activity8.55E-04
34GO:0003938: IMP dehydrogenase activity8.55E-04
35GO:0004047: aminomethyltransferase activity8.55E-04
36GO:0003735: structural constituent of ribosome8.98E-04
37GO:0016168: chlorophyll binding1.11E-03
38GO:0016798: hydrolase activity, acting on glycosyl bonds1.27E-03
39GO:0004565: beta-galactosidase activity1.36E-03
40GO:0005504: fatty acid binding1.39E-03
41GO:0004148: dihydrolipoyl dehydrogenase activity1.39E-03
42GO:0004075: biotin carboxylase activity1.39E-03
43GO:0030267: glyoxylate reductase (NADP) activity1.39E-03
44GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor1.39E-03
45GO:0004375: glycine dehydrogenase (decarboxylating) activity2.00E-03
46GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.00E-03
47GO:0008574: ATP-dependent microtubule motor activity, plus-end-directed2.69E-03
48GO:0045430: chalcone isomerase activity2.69E-03
49GO:0010328: auxin influx transmembrane transporter activity2.69E-03
50GO:0052793: pectin acetylesterase activity2.69E-03
51GO:0043495: protein anchor2.69E-03
52GO:0004659: prenyltransferase activity2.69E-03
53GO:0004845: uracil phosphoribosyltransferase activity2.69E-03
54GO:0004345: glucose-6-phosphate dehydrogenase activity2.69E-03
55GO:0016836: hydro-lyase activity2.69E-03
56GO:0030570: pectate lyase activity3.07E-03
57GO:0022891: substrate-specific transmembrane transporter activity3.07E-03
58GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.28E-03
59GO:0008514: organic anion transmembrane transporter activity3.33E-03
60GO:0009922: fatty acid elongase activity3.44E-03
61GO:0016773: phosphotransferase activity, alcohol group as acceptor3.44E-03
62GO:0003989: acetyl-CoA carboxylase activity3.44E-03
63GO:0004130: cytochrome-c peroxidase activity4.26E-03
64GO:0016208: AMP binding4.26E-03
65GO:0016688: L-ascorbate peroxidase activity4.26E-03
66GO:0008200: ion channel inhibitor activity4.26E-03
67GO:0051753: mannan synthase activity5.13E-03
68GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity5.13E-03
69GO:0004849: uridine kinase activity5.13E-03
70GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.13E-03
71GO:0004601: peroxidase activity5.27E-03
72GO:0019899: enzyme binding6.06E-03
73GO:0008289: lipid binding6.35E-03
74GO:0016722: oxidoreductase activity, oxidizing metal ions6.71E-03
75GO:0052747: sinapyl alcohol dehydrogenase activity7.05E-03
76GO:0004033: aldo-keto reductase (NADP) activity7.05E-03
77GO:0015250: water channel activity7.54E-03
78GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water8.09E-03
79GO:0008889: glycerophosphodiester phosphodiesterase activity9.18E-03
80GO:0008047: enzyme activator activity1.15E-02
81GO:0004805: trehalose-phosphatase activity1.15E-02
82GO:0047372: acylglycerol lipase activity1.28E-02
83GO:0003924: GTPase activity1.32E-02
84GO:0045551: cinnamyl-alcohol dehydrogenase activity1.41E-02
85GO:0004089: carbonate dehydratase activity1.54E-02
86GO:0031072: heat shock protein binding1.54E-02
87GO:0005262: calcium channel activity1.54E-02
88GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.68E-02
89GO:0042802: identical protein binding1.69E-02
90GO:0008146: sulfotransferase activity1.82E-02
91GO:0015293: symporter activity1.82E-02
92GO:0016491: oxidoreductase activity1.95E-02
93GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.96E-02
94GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.96E-02
95GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.96E-02
96GO:0031409: pigment binding1.96E-02
97GO:0005528: FK506 binding2.11E-02
98GO:0051536: iron-sulfur cluster binding2.11E-02
99GO:0003690: double-stranded DNA binding2.26E-02
100GO:0043424: protein histidine kinase binding2.27E-02
101GO:0005525: GTP binding2.28E-02
102GO:0003777: microtubule motor activity2.42E-02
103GO:0033612: receptor serine/threonine kinase binding2.43E-02
104GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.59E-02
105GO:0045735: nutrient reservoir activity2.59E-02
106GO:0008810: cellulase activity2.75E-02
107GO:0004650: polygalacturonase activity2.84E-02
108GO:0003727: single-stranded RNA binding2.92E-02
109GO:0005102: receptor binding3.09E-02
110GO:0047134: protein-disulfide reductase activity3.09E-02
111GO:0004812: aminoacyl-tRNA ligase activity3.09E-02
112GO:0052689: carboxylic ester hydrolase activity3.21E-02
113GO:0004791: thioredoxin-disulfide reductase activity3.63E-02
114GO:0004871: signal transducer activity3.76E-02
115GO:0005215: transporter activity3.81E-02
116GO:0004872: receptor activity3.82E-02
117GO:0004518: nuclease activity4.20E-02
118GO:0016829: lyase activity4.21E-02
119GO:0000156: phosphorelay response regulator activity4.39E-02
120GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.39E-02
121GO:0051015: actin filament binding4.39E-02
122GO:0016759: cellulose synthase activity4.59E-02
123GO:0008483: transaminase activity4.79E-02
124GO:0005200: structural constituent of cytoskeleton4.79E-02
125GO:0016413: O-acetyltransferase activity5.00E-02
RankGO TermAdjusted P value
1GO:0005835: fatty acid synthase complex0.00E+00
2GO:0009507: chloroplast1.12E-25
3GO:0009941: chloroplast envelope2.13E-16
4GO:0009570: chloroplast stroma2.49E-16
5GO:0031225: anchored component of membrane9.14E-15
6GO:0009543: chloroplast thylakoid lumen1.44E-12
7GO:0009535: chloroplast thylakoid membrane1.57E-11
8GO:0009579: thylakoid2.60E-11
9GO:0046658: anchored component of plasma membrane5.46E-11
10GO:0009534: chloroplast thylakoid3.40E-09
11GO:0031977: thylakoid lumen5.35E-09
12GO:0048046: apoplast2.49E-07
13GO:0009654: photosystem II oxygen evolving complex3.22E-07
14GO:0005618: cell wall3.99E-05
15GO:0019898: extrinsic component of membrane5.31E-05
16GO:0009505: plant-type cell wall5.98E-05
17GO:0009532: plastid stroma2.56E-04
18GO:0031969: chloroplast membrane4.23E-04
19GO:0005840: ribosome4.65E-04
20GO:0008290: F-actin capping protein complex8.55E-04
21GO:0042170: plastid membrane8.55E-04
22GO:0009528: plastid inner membrane1.39E-03
23GO:0005576: extracellular region1.48E-03
24GO:0010287: plastoglobule1.52E-03
25GO:0030095: chloroplast photosystem II1.53E-03
26GO:0005874: microtubule1.68E-03
27GO:0005960: glycine cleavage complex2.00E-03
28GO:0042651: thylakoid membrane2.34E-03
29GO:0009527: plastid outer membrane2.69E-03
30GO:0005886: plasma membrane3.15E-03
31GO:0031209: SCAR complex4.26E-03
32GO:0009523: photosystem II4.86E-03
33GO:0009533: chloroplast stromal thylakoid6.06E-03
34GO:0010319: stromule6.71E-03
35GO:0016020: membrane7.15E-03
36GO:0009539: photosystem II reaction center8.09E-03
37GO:0022626: cytosolic ribosome8.99E-03
38GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone)9.18E-03
39GO:0045298: tubulin complex9.18E-03
40GO:0005763: mitochondrial small ribosomal subunit9.18E-03
41GO:0015934: large ribosomal subunit1.14E-02
42GO:0005884: actin filament1.28E-02
43GO:0000311: plastid large ribosomal subunit1.41E-02
44GO:0030176: integral component of endoplasmic reticulum membrane1.82E-02
45GO:0030076: light-harvesting complex1.82E-02
46GO:0009506: plasmodesma1.87E-02
47GO:0016021: integral component of membrane2.30E-02
48GO:0005871: kinesin complex3.09E-02
49GO:0009522: photosystem I3.63E-02
50GO:0009536: plastid4.51E-02
51GO:0005778: peroxisomal membrane4.79E-02
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Gene type



Gene DE type