Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G65520

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006983: ER overload response0.00E+00
2GO:0010499: proteasomal ubiquitin-independent protein catabolic process0.00E+00
3GO:0051553: flavone biosynthetic process0.00E+00
4GO:0033542: fatty acid beta-oxidation, unsaturated, even number0.00E+00
5GO:0006182: cGMP biosynthetic process0.00E+00
6GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
7GO:0043269: regulation of ion transport0.00E+00
8GO:0017186: peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase0.00E+00
9GO:0043201: response to leucine0.00E+00
10GO:0080052: response to histidine0.00E+00
11GO:0080053: response to phenylalanine0.00E+00
12GO:0006468: protein phosphorylation3.93E-08
13GO:0042742: defense response to bacterium9.86E-08
14GO:0009620: response to fungus7.41E-06
15GO:0009751: response to salicylic acid1.29E-05
16GO:0002239: response to oomycetes3.61E-05
17GO:0009682: induced systemic resistance4.02E-05
18GO:0052544: defense response by callose deposition in cell wall4.02E-05
19GO:0060548: negative regulation of cell death6.44E-05
20GO:0000162: tryptophan biosynthetic process1.05E-04
21GO:0009759: indole glucosinolate biosynthetic process1.47E-04
22GO:0043687: post-translational protein modification3.17E-04
23GO:0046244: salicylic acid catabolic process3.17E-04
24GO:0009968: negative regulation of signal transduction3.17E-04
25GO:0010266: response to vitamin B13.17E-04
26GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine3.17E-04
27GO:0043547: positive regulation of GTPase activity3.17E-04
28GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline3.28E-04
29GO:0002229: defense response to oomycetes4.31E-04
30GO:0009617: response to bacterium4.35E-04
31GO:0055114: oxidation-reduction process4.51E-04
32GO:0009821: alkaloid biosynthetic process4.84E-04
33GO:0043069: negative regulation of programmed cell death6.67E-04
34GO:0031349: positive regulation of defense response6.92E-04
35GO:0043066: negative regulation of apoptotic process6.92E-04
36GO:0019483: beta-alanine biosynthetic process6.92E-04
37GO:0042939: tripeptide transport6.92E-04
38GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine6.92E-04
39GO:0060151: peroxisome localization6.92E-04
40GO:0006996: organelle organization6.92E-04
41GO:0080183: response to photooxidative stress6.92E-04
42GO:0090057: root radial pattern formation6.92E-04
43GO:0051645: Golgi localization6.92E-04
44GO:0006212: uracil catabolic process6.92E-04
45GO:0051646: mitochondrion localization1.12E-03
46GO:1900140: regulation of seedling development1.12E-03
47GO:0090436: leaf pavement cell development1.12E-03
48GO:0015783: GDP-fucose transport1.12E-03
49GO:0006517: protein deglycosylation1.12E-03
50GO:0006508: proteolysis1.19E-03
51GO:0080147: root hair cell development1.54E-03
52GO:0006516: glycoprotein catabolic process1.61E-03
53GO:0006515: misfolded or incompletely synthesized protein catabolic process1.61E-03
54GO:0000187: activation of MAPK activity1.61E-03
55GO:0048194: Golgi vesicle budding1.61E-03
56GO:0010150: leaf senescence1.64E-03
57GO:0007166: cell surface receptor signaling pathway2.02E-03
58GO:0071456: cellular response to hypoxia2.04E-03
59GO:2000038: regulation of stomatal complex development2.16E-03
60GO:0010188: response to microbial phytotoxin2.16E-03
61GO:0042938: dipeptide transport2.16E-03
62GO:0048830: adventitious root development2.16E-03
63GO:0030041: actin filament polymerization2.76E-03
64GO:0018279: protein N-linked glycosylation via asparagine2.76E-03
65GO:0007029: endoplasmic reticulum organization2.76E-03
66GO:0030308: negative regulation of cell growth2.76E-03
67GO:0050832: defense response to fungus2.95E-03
68GO:1900425: negative regulation of defense response to bacterium3.40E-03
69GO:0060918: auxin transport3.40E-03
70GO:0047484: regulation of response to osmotic stress3.40E-03
71GO:0009851: auxin biosynthetic process3.51E-03
72GO:0009612: response to mechanical stimulus4.10E-03
73GO:0006694: steroid biosynthetic process4.10E-03
74GO:2000037: regulation of stomatal complex patterning4.10E-03
75GO:0000911: cytokinesis by cell plate formation4.10E-03
76GO:0030163: protein catabolic process4.28E-03
77GO:0016192: vesicle-mediated transport4.80E-03
78GO:0071446: cellular response to salicylic acid stimulus4.84E-03
79GO:0044550: secondary metabolite biosynthetic process5.05E-03
80GO:0009615: response to virus5.44E-03
81GO:1900150: regulation of defense response to fungus5.62E-03
82GO:0009850: auxin metabolic process5.62E-03
83GO:0006102: isocitrate metabolic process5.62E-03
84GO:0009787: regulation of abscisic acid-activated signaling pathway5.62E-03
85GO:0009627: systemic acquired resistance6.07E-03
86GO:0043562: cellular response to nitrogen levels6.44E-03
87GO:0009808: lignin metabolic process6.44E-03
88GO:2000031: regulation of salicylic acid mediated signaling pathway6.44E-03
89GO:0009699: phenylpropanoid biosynthetic process6.44E-03
90GO:0006075: (1->3)-beta-D-glucan biosynthetic process6.44E-03
91GO:0016049: cell growth6.75E-03
92GO:0008219: cell death7.10E-03
93GO:0015780: nucleotide-sugar transport7.30E-03
94GO:0007338: single fertilization7.30E-03
95GO:0009813: flavonoid biosynthetic process7.46E-03
96GO:0032259: methylation7.53E-03
97GO:0040008: regulation of growth7.74E-03
98GO:0008202: steroid metabolic process8.21E-03
99GO:0009753: response to jasmonic acid8.94E-03
100GO:0009688: abscisic acid biosynthetic process9.15E-03
101GO:0009641: shade avoidance9.15E-03
102GO:0006099: tricarboxylic acid cycle9.42E-03
103GO:0015031: protein transport9.71E-03
104GO:0030148: sphingolipid biosynthetic process1.01E-02
105GO:0009684: indoleacetic acid biosynthetic process1.01E-02
106GO:0000038: very long-chain fatty acid metabolic process1.01E-02
107GO:0019684: photosynthesis, light reaction1.01E-02
108GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.11E-02
109GO:0000266: mitochondrial fission1.11E-02
110GO:0002213: defense response to insect1.11E-02
111GO:0042542: response to hydrogen peroxide1.12E-02
112GO:0051707: response to other organism1.16E-02
113GO:0006626: protein targeting to mitochondrion1.22E-02
114GO:0006807: nitrogen compound metabolic process1.22E-02
115GO:0010229: inflorescence development1.22E-02
116GO:0030048: actin filament-based movement1.22E-02
117GO:0008643: carbohydrate transport1.26E-02
118GO:0048467: gynoecium development1.33E-02
119GO:0002237: response to molecule of bacterial origin1.33E-02
120GO:0031347: regulation of defense response1.41E-02
121GO:0006952: defense response1.42E-02
122GO:0070588: calcium ion transmembrane transport1.44E-02
123GO:0042343: indole glucosinolate metabolic process1.44E-02
124GO:0009846: pollen germination1.46E-02
125GO:0009809: lignin biosynthetic process1.57E-02
126GO:0006487: protein N-linked glycosylation1.67E-02
127GO:0000027: ribosomal large subunit assembly1.67E-02
128GO:0009863: salicylic acid mediated signaling pathway1.67E-02
129GO:0006874: cellular calcium ion homeostasis1.80E-02
130GO:0009626: plant-type hypersensitive response1.99E-02
131GO:0030433: ubiquitin-dependent ERAD pathway2.05E-02
132GO:0031348: negative regulation of defense response2.05E-02
133GO:0019748: secondary metabolic process2.05E-02
134GO:0009814: defense response, incompatible interaction2.05E-02
135GO:0010227: floral organ abscission2.18E-02
136GO:0006012: galactose metabolic process2.18E-02
137GO:0042127: regulation of cell proliferation2.31E-02
138GO:0009306: protein secretion2.31E-02
139GO:0010584: pollen exine formation2.31E-02
140GO:0009742: brassinosteroid mediated signaling pathway2.38E-02
141GO:0042147: retrograde transport, endosome to Golgi2.45E-02
142GO:0042391: regulation of membrane potential2.59E-02
143GO:0042631: cellular response to water deprivation2.59E-02
144GO:0009737: response to abscisic acid2.60E-02
145GO:0010197: polar nucleus fusion2.73E-02
146GO:0010182: sugar mediated signaling pathway2.73E-02
147GO:0008360: regulation of cell shape2.73E-02
148GO:0009958: positive gravitropism2.73E-02
149GO:0048544: recognition of pollen2.88E-02
150GO:0061025: membrane fusion2.88E-02
151GO:0009058: biosynthetic process2.96E-02
152GO:0009749: response to glucose3.02E-02
153GO:0006623: protein targeting to vacuole3.02E-02
154GO:0010183: pollen tube guidance3.02E-02
155GO:0000302: response to reactive oxygen species3.17E-02
156GO:0010193: response to ozone3.17E-02
157GO:0006891: intra-Golgi vesicle-mediated transport3.17E-02
158GO:0016032: viral process3.32E-02
159GO:0009630: gravitropism3.32E-02
160GO:0010090: trichome morphogenesis3.48E-02
161GO:0009567: double fertilization forming a zygote and endosperm3.64E-02
162GO:0019760: glucosinolate metabolic process3.64E-02
163GO:0006904: vesicle docking involved in exocytosis3.80E-02
164GO:0016126: sterol biosynthetic process4.12E-02
165GO:0009817: defense response to fungus, incompatible interaction4.98E-02
RankGO TermAdjusted P value
1GO:0000247: C-8 sterol isomerase activity0.00E+00
2GO:0047750: cholestenol delta-isomerase activity0.00E+00
3GO:0016504: peptidase activator activity0.00E+00
4GO:0016603: glutaminyl-peptide cyclotransferase activity0.00E+00
5GO:0033759: flavone synthase activity0.00E+00
6GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
7GO:0003837: beta-ureidopropionase activity0.00E+00
8GO:0004164: diphthine synthase activity0.00E+00
9GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
10GO:0070577: lysine-acetylated histone binding0.00E+00
11GO:0016301: kinase activity6.15E-08
12GO:0004674: protein serine/threonine kinase activity1.05E-06
13GO:0004190: aspartic-type endopeptidase activity2.88E-06
14GO:0004579: dolichyl-diphosphooligosaccharide-protein glycotransferase activity1.01E-04
15GO:0004040: amidase activity1.01E-04
16GO:0004672: protein kinase activity1.33E-04
17GO:0005506: iron ion binding1.50E-04
18GO:0033612: receptor serine/threonine kinase binding1.63E-04
19GO:0005524: ATP binding1.66E-04
20GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1.67E-04
21GO:0004656: procollagen-proline 4-dioxygenase activity2.00E-04
22GO:0004012: phospholipid-translocating ATPase activity2.00E-04
23GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.17E-04
24GO:0004425: indole-3-glycerol-phosphate synthase activity3.17E-04
25GO:0033984: indole-3-glycerol-phosphate lyase activity3.17E-04
26GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity3.17E-04
27GO:0004714: transmembrane receptor protein tyrosine kinase activity3.28E-04
28GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.66E-04
29GO:0016844: strictosidine synthase activity5.72E-04
30GO:0045140: inositol phosphoceramide synthase activity6.92E-04
31GO:0030742: GTP-dependent protein binding6.92E-04
32GO:0042937: tripeptide transporter activity6.92E-04
33GO:0004566: beta-glucuronidase activity6.92E-04
34GO:0032934: sterol binding6.92E-04
35GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.95E-04
36GO:0004383: guanylate cyclase activity1.12E-03
37GO:0016805: dipeptidase activity1.12E-03
38GO:0005457: GDP-fucose transmembrane transporter activity1.12E-03
39GO:0008430: selenium binding1.12E-03
40GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity1.12E-03
41GO:0004148: dihydrolipoyl dehydrogenase activity1.12E-03
42GO:0031418: L-ascorbic acid binding1.54E-03
43GO:0005509: calcium ion binding1.60E-03
44GO:0004449: isocitrate dehydrogenase (NAD+) activity1.61E-03
45GO:0010178: IAA-amino acid conjugate hydrolase activity1.61E-03
46GO:0004031: aldehyde oxidase activity2.16E-03
47GO:0050302: indole-3-acetaldehyde oxidase activity2.16E-03
48GO:0004930: G-protein coupled receptor activity2.16E-03
49GO:0004576: oligosaccharyl transferase activity2.16E-03
50GO:0004834: tryptophan synthase activity2.16E-03
51GO:0042936: dipeptide transporter activity2.16E-03
52GO:0070628: proteasome binding2.16E-03
53GO:0017137: Rab GTPase binding2.76E-03
54GO:0005496: steroid binding2.76E-03
55GO:0045431: flavonol synthase activity2.76E-03
56GO:0015301: anion:anion antiporter activity2.76E-03
57GO:0005452: inorganic anion exchanger activity2.76E-03
58GO:0019825: oxygen binding3.04E-03
59GO:0005516: calmodulin binding3.39E-03
60GO:0004029: aldehyde dehydrogenase (NAD) activity3.40E-03
61GO:0004602: glutathione peroxidase activity4.10E-03
62GO:0102391: decanoate--CoA ligase activity4.10E-03
63GO:0008320: protein transmembrane transporter activity4.84E-03
64GO:0004467: long-chain fatty acid-CoA ligase activity4.84E-03
65GO:0008235: metalloexopeptidase activity4.84E-03
66GO:0020037: heme binding5.16E-03
67GO:0052747: sinapyl alcohol dehydrogenase activity5.62E-03
68GO:0004708: MAP kinase kinase activity5.62E-03
69GO:0004034: aldose 1-epimerase activity5.62E-03
70GO:0030247: polysaccharide binding6.41E-03
71GO:0004683: calmodulin-dependent protein kinase activity6.41E-03
72GO:0008142: oxysterol binding6.44E-03
73GO:0003843: 1,3-beta-D-glucan synthase activity6.44E-03
74GO:0008757: S-adenosylmethionine-dependent methyltransferase activity6.75E-03
75GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.51E-03
76GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.21E-03
77GO:0016614: oxidoreductase activity, acting on CH-OH group of donors8.22E-03
78GO:0008171: O-methyltransferase activity9.15E-03
79GO:0004177: aminopeptidase activity1.01E-02
80GO:0045551: cinnamyl-alcohol dehydrogenase activity1.11E-02
81GO:0015095: magnesium ion transmembrane transporter activity1.22E-02
82GO:0005262: calcium channel activity1.22E-02
83GO:0005388: calcium-transporting ATPase activity1.22E-02
84GO:0051537: 2 iron, 2 sulfur cluster binding1.26E-02
85GO:0003774: motor activity1.33E-02
86GO:0008168: methyltransferase activity1.37E-02
87GO:0003712: transcription cofactor activity1.44E-02
88GO:0005217: intracellular ligand-gated ion channel activity1.44E-02
89GO:0004970: ionotropic glutamate receptor activity1.44E-02
90GO:0030552: cAMP binding1.44E-02
91GO:0030553: cGMP binding1.44E-02
92GO:0003954: NADH dehydrogenase activity1.67E-02
93GO:0050660: flavin adenine dinucleotide binding1.72E-02
94GO:0008234: cysteine-type peptidase activity1.74E-02
95GO:0005216: ion channel activity1.80E-02
96GO:0004707: MAP kinase activity1.92E-02
97GO:0003779: actin binding2.18E-02
98GO:0008514: organic anion transmembrane transporter activity2.31E-02
99GO:0015035: protein disulfide oxidoreductase activity2.31E-02
100GO:0005249: voltage-gated potassium channel activity2.59E-02
101GO:0030551: cyclic nucleotide binding2.59E-02
102GO:0010181: FMN binding2.88E-02
103GO:0016853: isomerase activity2.88E-02
104GO:0009055: electron carrier activity3.35E-02
105GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.80E-02
106GO:0008237: metallopeptidase activity3.80E-02
107GO:0051213: dioxygenase activity4.12E-02
108GO:0009931: calcium-dependent protein serine/threonine kinase activity4.46E-02
109GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity4.98E-02
RankGO TermAdjusted P value
1GO:0016021: integral component of membrane2.08E-14
2GO:0005886: plasma membrane2.15E-10
3GO:0005783: endoplasmic reticulum9.19E-08
4GO:0005789: endoplasmic reticulum membrane3.54E-05
5GO:0008250: oligosaccharyltransferase complex1.01E-04
6GO:0005911: cell-cell junction3.17E-04
7GO:0045252: oxoglutarate dehydrogenase complex3.17E-04
8GO:0030134: ER to Golgi transport vesicle6.92E-04
9GO:0031304: intrinsic component of mitochondrial inner membrane6.92E-04
10GO:0005765: lysosomal membrane7.70E-04
11GO:0005794: Golgi apparatus9.30E-04
12GO:0070062: extracellular exosome1.61E-03
13GO:0030660: Golgi-associated vesicle membrane2.16E-03
14GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane2.16E-03
15GO:0010008: endosome membrane3.36E-03
16GO:0009504: cell plate3.51E-03
17GO:0005802: trans-Golgi network3.84E-03
18GO:0032580: Golgi cisterna membrane4.56E-03
19GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane5.62E-03
20GO:0000148: 1,3-beta-D-glucan synthase complex6.44E-03
21GO:0030665: clathrin-coated vesicle membrane8.21E-03
22GO:0016459: myosin complex9.15E-03
23GO:0017119: Golgi transport complex9.15E-03
24GO:0016020: membrane9.48E-03
25GO:0005768: endosome1.55E-02
26GO:0043234: protein complex1.56E-02
27GO:0005769: early endosome1.56E-02
28GO:0005839: proteasome core complex1.92E-02
29GO:0005747: mitochondrial respiratory chain complex I1.92E-02
30GO:0019898: extrinsic component of membrane3.02E-02
31GO:0000139: Golgi membrane3.10E-02
32GO:0000145: exocyst3.32E-02
33GO:0005829: cytosol4.10E-02
34GO:0005887: integral component of plasma membrane4.47E-02
35GO:0005643: nuclear pore4.98E-02
36GO:0009707: chloroplast outer membrane4.98E-02
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Gene type



Gene DE type