Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G65500

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0050691: regulation of defense response to virus by host0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0006042: glucosamine biosynthetic process0.00E+00
4GO:1901137: carbohydrate derivative biosynthetic process0.00E+00
5GO:0042430: indole-containing compound metabolic process0.00E+00
6GO:0070212: protein poly-ADP-ribosylation0.00E+00
7GO:0045792: negative regulation of cell size0.00E+00
8GO:0006457: protein folding1.37E-10
9GO:0042742: defense response to bacterium2.47E-08
10GO:0034976: response to endoplasmic reticulum stress3.88E-08
11GO:0046686: response to cadmium ion3.14E-07
12GO:0009751: response to salicylic acid5.09E-07
13GO:0009627: systemic acquired resistance2.59E-06
14GO:0045454: cell redox homeostasis2.73E-06
15GO:0009617: response to bacterium3.29E-06
16GO:0031349: positive regulation of defense response3.35E-06
17GO:0055074: calcium ion homeostasis1.21E-05
18GO:0006468: protein phosphorylation1.69E-05
19GO:0002237: response to molecule of bacterial origin5.23E-05
20GO:0009553: embryo sac development5.89E-05
21GO:0006465: signal peptide processing7.79E-05
22GO:0016998: cell wall macromolecule catabolic process1.17E-04
23GO:0010200: response to chitin1.32E-04
24GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.56E-04
25GO:0006952: defense response1.59E-04
26GO:0051707: response to other organism1.74E-04
27GO:0010150: leaf senescence1.99E-04
28GO:0031347: regulation of defense response2.40E-04
29GO:0009700: indole phytoalexin biosynthetic process2.70E-04
30GO:0010230: alternative respiration2.70E-04
31GO:0060862: negative regulation of floral organ abscission2.70E-04
32GO:0046244: salicylic acid catabolic process2.70E-04
33GO:0080093: regulation of photorespiration2.70E-04
34GO:0019276: UDP-N-acetylgalactosamine metabolic process2.70E-04
35GO:0031998: regulation of fatty acid beta-oxidation2.70E-04
36GO:0034975: protein folding in endoplasmic reticulum2.70E-04
37GO:0006047: UDP-N-acetylglucosamine metabolic process2.70E-04
38GO:0009609: response to symbiotic bacterium2.70E-04
39GO:0000302: response to reactive oxygen species3.18E-04
40GO:0010193: response to ozone3.18E-04
41GO:0030968: endoplasmic reticulum unfolded protein response3.19E-04
42GO:0009626: plant-type hypersensitive response4.16E-04
43GO:0009615: response to virus5.15E-04
44GO:0006032: chitin catabolic process5.32E-04
45GO:0009816: defense response to bacterium, incompatible interaction5.53E-04
46GO:0051252: regulation of RNA metabolic process5.94E-04
47GO:2000072: regulation of defense response to fungus, incompatible interaction5.94E-04
48GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.94E-04
49GO:0080185: effector dependent induction by symbiont of host immune response5.94E-04
50GO:0015865: purine nucleotide transport5.94E-04
51GO:0009651: response to salt stress7.87E-04
52GO:1900140: regulation of seedling development9.62E-04
53GO:0010581: regulation of starch biosynthetic process9.62E-04
54GO:0045793: positive regulation of cell size9.62E-04
55GO:0006011: UDP-glucose metabolic process9.62E-04
56GO:0010272: response to silver ion9.62E-04
57GO:0048281: inflorescence morphogenesis9.62E-04
58GO:0006048: UDP-N-acetylglucosamine biosynthetic process9.62E-04
59GO:1902626: assembly of large subunit precursor of preribosome9.62E-04
60GO:0045087: innate immune response9.69E-04
61GO:0006099: tricarboxylic acid cycle1.02E-03
62GO:0006979: response to oxidative stress1.15E-03
63GO:0009863: salicylic acid mediated signaling pathway1.23E-03
64GO:0000027: ribosomal large subunit assembly1.23E-03
65GO:0015696: ammonium transport1.38E-03
66GO:0071323: cellular response to chitin1.38E-03
67GO:0006168: adenine salvage1.38E-03
68GO:0009855: determination of bilateral symmetry1.38E-03
69GO:0001676: long-chain fatty acid metabolic process1.38E-03
70GO:0032877: positive regulation of DNA endoreduplication1.38E-03
71GO:0000187: activation of MAPK activity1.38E-03
72GO:0006166: purine ribonucleoside salvage1.38E-03
73GO:0002239: response to oomycetes1.38E-03
74GO:0043207: response to external biotic stimulus1.38E-03
75GO:0046902: regulation of mitochondrial membrane permeability1.38E-03
76GO:0072334: UDP-galactose transmembrane transport1.38E-03
77GO:0007166: cell surface receptor signaling pathway1.41E-03
78GO:0050832: defense response to fungus1.59E-03
79GO:0009625: response to insect1.76E-03
80GO:0010188: response to microbial phytotoxin1.84E-03
81GO:0060548: negative regulation of cell death1.84E-03
82GO:0051781: positive regulation of cell division1.84E-03
83GO:0072488: ammonium transmembrane transport1.84E-03
84GO:0042273: ribosomal large subunit biogenesis1.84E-03
85GO:0006621: protein retention in ER lumen1.84E-03
86GO:0009409: response to cold2.20E-03
87GO:0046283: anthocyanin-containing compound metabolic process2.35E-03
88GO:0031365: N-terminal protein amino acid modification2.35E-03
89GO:0006097: glyoxylate cycle2.35E-03
90GO:0044209: AMP salvage2.35E-03
91GO:0009697: salicylic acid biosynthetic process2.35E-03
92GO:0006662: glycerol ether metabolic process2.42E-03
93GO:0010197: polar nucleus fusion2.42E-03
94GO:0010942: positive regulation of cell death2.90E-03
95GO:0060918: auxin transport2.90E-03
96GO:0006891: intra-Golgi vesicle-mediated transport2.98E-03
97GO:0009624: response to nematode3.03E-03
98GO:0006880: intracellular sequestering of iron ion4.12E-03
99GO:0009610: response to symbiotic fungus4.12E-03
100GO:0071446: cellular response to salicylic acid stimulus4.12E-03
101GO:0080186: developmental vegetative growth4.12E-03
102GO:0030026: cellular manganese ion homeostasis4.12E-03
103GO:0006886: intracellular protein transport4.28E-03
104GO:0009690: cytokinin metabolic process4.77E-03
105GO:0006605: protein targeting4.77E-03
106GO:0030162: regulation of proteolysis4.77E-03
107GO:0031540: regulation of anthocyanin biosynthetic process4.77E-03
108GO:0006102: isocitrate metabolic process4.77E-03
109GO:0009787: regulation of abscisic acid-activated signaling pathway4.77E-03
110GO:0010120: camalexin biosynthetic process5.47E-03
111GO:0010497: plasmodesmata-mediated intercellular transport5.47E-03
112GO:0010204: defense response signaling pathway, resistance gene-independent5.47E-03
113GO:2000031: regulation of salicylic acid mediated signaling pathway5.47E-03
114GO:0009699: phenylpropanoid biosynthetic process5.47E-03
115GO:0009408: response to heat5.61E-03
116GO:0008219: cell death5.61E-03
117GO:0015031: protein transport6.11E-03
118GO:0010112: regulation of systemic acquired resistance6.20E-03
119GO:0006189: 'de novo' IMP biosynthetic process6.20E-03
120GO:0015780: nucleotide-sugar transport6.20E-03
121GO:0010205: photoinhibition6.96E-03
122GO:0043067: regulation of programmed cell death6.96E-03
123GO:2000280: regulation of root development6.96E-03
124GO:0034599: cellular response to oxidative stress7.44E-03
125GO:0009870: defense response signaling pathway, resistance gene-dependent7.75E-03
126GO:0000103: sulfate assimilation7.75E-03
127GO:0010215: cellulose microfibril organization7.75E-03
128GO:0051555: flavonol biosynthetic process7.75E-03
129GO:0015770: sucrose transport8.58E-03
130GO:0000272: polysaccharide catabolic process8.58E-03
131GO:0072593: reactive oxygen species metabolic process8.58E-03
132GO:0006890: retrograde vesicle-mediated transport, Golgi to ER9.44E-03
133GO:0071365: cellular response to auxin stimulus9.44E-03
134GO:0012501: programmed cell death9.44E-03
135GO:0015706: nitrate transport9.44E-03
136GO:0008643: carbohydrate transport9.94E-03
137GO:0006108: malate metabolic process1.03E-02
138GO:0010075: regulation of meristem growth1.03E-02
139GO:0006855: drug transmembrane transport1.07E-02
140GO:0009934: regulation of meristem structural organization1.12E-02
141GO:0048467: gynoecium development1.12E-02
142GO:0034605: cellular response to heat1.12E-02
143GO:0009414: response to water deprivation1.19E-02
144GO:0042343: indole glucosinolate metabolic process1.22E-02
145GO:0010167: response to nitrate1.22E-02
146GO:0006364: rRNA processing1.24E-02
147GO:0010224: response to UV-B1.28E-02
148GO:0009555: pollen development1.34E-02
149GO:0009611: response to wounding1.38E-02
150GO:0009116: nucleoside metabolic process1.42E-02
151GO:0016192: vesicle-mediated transport1.49E-02
152GO:0015992: proton transport1.62E-02
153GO:0009620: response to fungus1.62E-02
154GO:0098542: defense response to other organism1.62E-02
155GO:2000022: regulation of jasmonic acid mediated signaling pathway1.73E-02
156GO:0030433: ubiquitin-dependent ERAD pathway1.73E-02
157GO:0035428: hexose transmembrane transport1.73E-02
158GO:0031348: negative regulation of defense response1.73E-02
159GO:0019748: secondary metabolic process1.73E-02
160GO:0009814: defense response, incompatible interaction1.73E-02
161GO:0009411: response to UV1.84E-02
162GO:0009306: protein secretion1.95E-02
163GO:0010051: xylem and phloem pattern formation2.19E-02
164GO:0010118: stomatal movement2.19E-02
165GO:0042631: cellular response to water deprivation2.19E-02
166GO:0048868: pollen tube development2.31E-02
167GO:0046323: glucose import2.31E-02
168GO:0009960: endosperm development2.31E-02
169GO:0015986: ATP synthesis coupled proton transport2.43E-02
170GO:0009646: response to absence of light2.43E-02
171GO:0006623: protein targeting to vacuole2.55E-02
172GO:0009790: embryo development2.59E-02
173GO:0002229: defense response to oomycetes2.68E-02
174GO:0071281: cellular response to iron ion2.94E-02
175GO:0007623: circadian rhythm3.06E-02
176GO:0006464: cellular protein modification process3.07E-02
177GO:0009567: double fertilization forming a zygote and endosperm3.07E-02
178GO:0051607: defense response to virus3.34E-02
179GO:0000910: cytokinesis3.34E-02
180GO:0006906: vesicle fusion3.77E-02
181GO:0042128: nitrate assimilation3.77E-02
182GO:0006950: response to stress3.91E-02
183GO:0055114: oxidation-reduction process4.02E-02
184GO:0016049: cell growth4.06E-02
185GO:0009817: defense response to fungus, incompatible interaction4.21E-02
186GO:0006499: N-terminal protein myristoylation4.51E-02
187GO:0009407: toxin catabolic process4.51E-02
188GO:0009631: cold acclimation4.66E-02
189GO:0010043: response to zinc ion4.66E-02
190GO:0042254: ribosome biogenesis4.80E-02
191GO:0009867: jasmonic acid mediated signaling pathway4.97E-02
RankGO TermAdjusted P value
1GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
2GO:0005046: KDEL sequence binding0.00E+00
3GO:0005212: structural constituent of eye lens0.00E+00
4GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
5GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity0.00E+00
6GO:0008752: FMN reductase activity0.00E+00
7GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
8GO:0050269: coniferyl-aldehyde dehydrogenase activity0.00E+00
9GO:0052873: FMN reductase (NADPH) activity0.00E+00
10GO:0005524: ATP binding2.65E-08
11GO:0003756: protein disulfide isomerase activity1.99E-07
12GO:0051082: unfolded protein binding2.66E-07
13GO:0005460: UDP-glucose transmembrane transporter activity2.72E-05
14GO:0008061: chitin binding6.27E-05
15GO:0047631: ADP-ribose diphosphatase activity7.79E-05
16GO:0005459: UDP-galactose transmembrane transporter activity7.79E-05
17GO:0016301: kinase activity9.83E-05
18GO:0004674: protein serine/threonine kinase activity9.86E-05
19GO:0003746: translation elongation factor activity1.11E-04
20GO:0000210: NAD+ diphosphatase activity1.13E-04
21GO:0004714: transmembrane receptor protein tyrosine kinase activity2.58E-04
22GO:0003977: UDP-N-acetylglucosamine diphosphorylase activity2.70E-04
23GO:0004638: phosphoribosylaminoimidazole carboxylase activity2.70E-04
24GO:0052630: UDP-N-acetylgalactosamine diphosphorylase activity2.70E-04
25GO:1901149: salicylic acid binding2.70E-04
26GO:0097367: carbohydrate derivative binding2.70E-04
27GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity2.70E-04
28GO:0080042: ADP-glucose pyrophosphohydrolase activity2.70E-04
29GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.78E-04
30GO:0015035: protein disulfide oxidoreductase activity5.26E-04
31GO:0004568: chitinase activity5.32E-04
32GO:0004775: succinate-CoA ligase (ADP-forming) activity5.94E-04
33GO:0004338: glucan exo-1,3-beta-glucosidase activity5.94E-04
34GO:0008517: folic acid transporter activity5.94E-04
35GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity5.94E-04
36GO:0004776: succinate-CoA ligase (GDP-forming) activity5.94E-04
37GO:0080041: ADP-ribose pyrophosphohydrolase activity5.94E-04
38GO:0008428: ribonuclease inhibitor activity5.94E-04
39GO:0017110: nucleoside-diphosphatase activity5.94E-04
40GO:0003955: NAD(P)H dehydrogenase (quinone) activity9.62E-04
41GO:0004148: dihydrolipoyl dehydrogenase activity9.62E-04
42GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity9.62E-04
43GO:0000030: mannosyltransferase activity9.62E-04
44GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.04E-03
45GO:0004449: isocitrate dehydrogenase (NAD+) activity1.38E-03
46GO:0035529: NADH pyrophosphatase activity1.38E-03
47GO:0009678: hydrogen-translocating pyrophosphatase activity1.38E-03
48GO:0003999: adenine phosphoribosyltransferase activity1.38E-03
49GO:0051287: NAD binding1.69E-03
50GO:0010011: auxin binding1.84E-03
51GO:0046923: ER retention sequence binding1.84E-03
52GO:0047134: protein-disulfide reductase activity2.08E-03
53GO:0008948: oxaloacetate decarboxylase activity2.35E-03
54GO:0005471: ATP:ADP antiporter activity2.35E-03
55GO:0015145: monosaccharide transmembrane transporter activity2.35E-03
56GO:0004791: thioredoxin-disulfide reductase activity2.60E-03
57GO:0004872: receptor activity2.79E-03
58GO:0016887: ATPase activity2.85E-03
59GO:0016615: malate dehydrogenase activity2.90E-03
60GO:0008519: ammonium transmembrane transporter activity2.90E-03
61GO:0004029: aldehyde dehydrogenase (NAD) activity2.90E-03
62GO:0005509: calcium ion binding3.25E-03
63GO:0102391: decanoate--CoA ligase activity3.49E-03
64GO:0030060: L-malate dehydrogenase activity3.49E-03
65GO:0008320: protein transmembrane transporter activity4.12E-03
66GO:0004467: long-chain fatty acid-CoA ligase activity4.12E-03
67GO:0008506: sucrose:proton symporter activity4.12E-03
68GO:0008235: metalloexopeptidase activity4.12E-03
69GO:0004427: inorganic diphosphatase activity4.12E-03
70GO:0004708: MAP kinase kinase activity4.77E-03
71GO:0047893: flavonol 3-O-glucosyltransferase activity4.77E-03
72GO:0008565: protein transporter activity5.07E-03
73GO:0008135: translation factor activity, RNA binding5.47E-03
74GO:0030246: carbohydrate binding6.09E-03
75GO:0050897: cobalt ion binding6.49E-03
76GO:0005384: manganese ion transmembrane transporter activity6.96E-03
77GO:0015112: nitrate transmembrane transporter activity6.96E-03
78GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.96E-03
79GO:0005381: iron ion transmembrane transporter activity6.96E-03
80GO:0004713: protein tyrosine kinase activity7.75E-03
81GO:0004177: aminopeptidase activity8.58E-03
82GO:0008559: xenobiotic-transporting ATPase activity8.58E-03
83GO:0031072: heat shock protein binding1.03E-02
84GO:0015114: phosphate ion transmembrane transporter activity1.03E-02
85GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.12E-02
86GO:0008266: poly(U) RNA binding1.12E-02
87GO:0031625: ubiquitin protein ligase binding1.37E-02
88GO:0008233: peptidase activity1.37E-02
89GO:0004497: monooxygenase activity1.40E-02
90GO:0004298: threonine-type endopeptidase activity1.62E-02
91GO:0004707: MAP kinase activity1.62E-02
92GO:0033612: receptor serine/threonine kinase binding1.62E-02
93GO:0080043: quercetin 3-O-glucosyltransferase activity1.62E-02
94GO:0080044: quercetin 7-O-glucosyltransferase activity1.62E-02
95GO:0035251: UDP-glucosyltransferase activity1.62E-02
96GO:0016779: nucleotidyltransferase activity1.73E-02
97GO:0022891: substrate-specific transmembrane transporter activity1.84E-02
98GO:0008810: cellulase activity1.84E-02
99GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.93E-02
100GO:0008514: organic anion transmembrane transporter activity1.95E-02
101GO:0016758: transferase activity, transferring hexosyl groups2.16E-02
102GO:0005507: copper ion binding2.27E-02
103GO:0019825: oxygen binding2.27E-02
104GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.31E-02
105GO:0004672: protein kinase activity2.39E-02
106GO:0010181: FMN binding2.43E-02
107GO:0016853: isomerase activity2.43E-02
108GO:0005355: glucose transmembrane transporter activity2.43E-02
109GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.21E-02
110GO:0008483: transaminase activity3.21E-02
111GO:0008194: UDP-glycosyltransferase activity3.42E-02
112GO:0051213: dioxygenase activity3.48E-02
113GO:0005506: iron ion binding3.72E-02
114GO:0042802: identical protein binding3.88E-02
115GO:0030247: polysaccharide binding3.91E-02
116GO:0015238: drug transmembrane transporter activity4.36E-02
117GO:0005215: transporter activity4.39E-02
118GO:0004222: metalloendopeptidase activity4.51E-02
119GO:0030145: manganese ion binding4.66E-02
120GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.66E-02
121GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.97E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0005788: endoplasmic reticulum lumen1.43E-16
3GO:0005783: endoplasmic reticulum1.53E-16
4GO:0005886: plasma membrane1.04E-15
5GO:0005774: vacuolar membrane7.36E-07
6GO:0005773: vacuole1.84E-06
7GO:0016021: integral component of membrane3.85E-05
8GO:0005618: cell wall1.44E-04
9GO:0005801: cis-Golgi network1.56E-04
10GO:0005787: signal peptidase complex2.70E-04
11GO:0005789: endoplasmic reticulum membrane2.73E-04
12GO:0009507: chloroplast2.74E-04
13GO:0048046: apoplast3.43E-04
14GO:0005794: Golgi apparatus3.47E-04
15GO:0031090: organelle membrane3.84E-04
16GO:0005740: mitochondrial envelope5.32E-04
17GO:0009505: plant-type cell wall5.67E-04
18GO:0030134: ER to Golgi transport vesicle5.94E-04
19GO:0046861: glyoxysomal membrane9.62E-04
20GO:0005795: Golgi stack9.99E-04
21GO:0030176: integral component of endoplasmic reticulum membrane9.99E-04
22GO:0009506: plasmodesma1.36E-03
23GO:0000275: mitochondrial proton-transporting ATP synthase complex, catalytic core F(1)1.84E-03
24GO:0031225: anchored component of membrane2.28E-03
25GO:0005747: mitochondrial respiratory chain complex I2.49E-03
26GO:0010168: ER body2.90E-03
27GO:0030173: integral component of Golgi membrane3.49E-03
28GO:0005829: cytosol5.21E-03
29GO:0000326: protein storage vacuole5.47E-03
30GO:0009514: glyoxysome5.47E-03
31GO:0019005: SCF ubiquitin ligase complex5.61E-03
32GO:0030665: clathrin-coated vesicle membrane6.96E-03
33GO:0017119: Golgi transport complex7.75E-03
34GO:0046658: anchored component of plasma membrane8.69E-03
35GO:0031012: extracellular matrix1.03E-02
36GO:0016020: membrane1.21E-02
37GO:0005753: mitochondrial proton-transporting ATP synthase complex1.22E-02
38GO:0000502: proteasome complex1.24E-02
39GO:0005741: mitochondrial outer membrane1.62E-02
40GO:0005839: proteasome core complex1.62E-02
41GO:0005623: cell2.28E-02
42GO:0043231: intracellular membrane-bounded organelle2.58E-02
43GO:0016592: mediator complex2.81E-02
44GO:0000151: ubiquitin ligase complex4.21E-02
45GO:0005739: mitochondrion4.47E-02
46GO:0000325: plant-type vacuole4.66E-02
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Gene type



Gene DE type