GO Enrichment Analysis of Co-expressed Genes with
AT1G65295
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 4 | GO:0010206: photosystem II repair | 1.27E-06 |
| 5 | GO:0042254: ribosome biogenesis | 1.98E-06 |
| 6 | GO:0015979: photosynthesis | 5.24E-06 |
| 7 | GO:0010207: photosystem II assembly | 6.19E-06 |
| 8 | GO:0006412: translation | 7.52E-06 |
| 9 | GO:0046620: regulation of organ growth | 6.23E-05 |
| 10 | GO:1902458: positive regulation of stomatal opening | 1.06E-04 |
| 11 | GO:0043686: co-translational protein modification | 1.06E-04 |
| 12 | GO:0015995: chlorophyll biosynthetic process | 1.10E-04 |
| 13 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.91E-04 |
| 14 | GO:0006729: tetrahydrobiopterin biosynthetic process | 2.48E-04 |
| 15 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.48E-04 |
| 16 | GO:0010024: phytochromobilin biosynthetic process | 2.48E-04 |
| 17 | GO:0080175: phragmoplast microtubule organization | 2.48E-04 |
| 18 | GO:1900871: chloroplast mRNA modification | 2.48E-04 |
| 19 | GO:0001736: establishment of planar polarity | 2.48E-04 |
| 20 | GO:0009926: auxin polar transport | 2.53E-04 |
| 21 | GO:0009733: response to auxin | 3.42E-04 |
| 22 | GO:0006788: heme oxidation | 4.12E-04 |
| 23 | GO:0090391: granum assembly | 4.12E-04 |
| 24 | GO:0006518: peptide metabolic process | 4.12E-04 |
| 25 | GO:0071484: cellular response to light intensity | 5.92E-04 |
| 26 | GO:0034059: response to anoxia | 5.92E-04 |
| 27 | GO:0055070: copper ion homeostasis | 5.92E-04 |
| 28 | GO:0035434: copper ion transmembrane transport | 9.92E-04 |
| 29 | GO:0051225: spindle assembly | 9.92E-04 |
| 30 | GO:0016120: carotene biosynthetic process | 9.92E-04 |
| 31 | GO:0045038: protein import into chloroplast thylakoid membrane | 9.92E-04 |
| 32 | GO:0031365: N-terminal protein amino acid modification | 9.92E-04 |
| 33 | GO:0010027: thylakoid membrane organization | 1.19E-03 |
| 34 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.21E-03 |
| 35 | GO:0080086: stamen filament development | 1.45E-03 |
| 36 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 1.45E-03 |
| 37 | GO:0017148: negative regulation of translation | 1.45E-03 |
| 38 | GO:0009772: photosynthetic electron transport in photosystem II | 1.70E-03 |
| 39 | GO:0010196: nonphotochemical quenching | 1.70E-03 |
| 40 | GO:1900057: positive regulation of leaf senescence | 1.70E-03 |
| 41 | GO:0010444: guard mother cell differentiation | 1.70E-03 |
| 42 | GO:2000070: regulation of response to water deprivation | 1.97E-03 |
| 43 | GO:0009658: chloroplast organization | 2.00E-03 |
| 44 | GO:0015996: chlorophyll catabolic process | 2.24E-03 |
| 45 | GO:0007186: G-protein coupled receptor signaling pathway | 2.24E-03 |
| 46 | GO:0032544: plastid translation | 2.24E-03 |
| 47 | GO:0009051: pentose-phosphate shunt, oxidative branch | 2.53E-03 |
| 48 | GO:0010205: photoinhibition | 2.84E-03 |
| 49 | GO:0009638: phototropism | 2.84E-03 |
| 50 | GO:0048829: root cap development | 3.15E-03 |
| 51 | GO:0009773: photosynthetic electron transport in photosystem I | 3.47E-03 |
| 52 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.47E-03 |
| 53 | GO:0048765: root hair cell differentiation | 3.47E-03 |
| 54 | GO:0006869: lipid transport | 3.71E-03 |
| 55 | GO:0045037: protein import into chloroplast stroma | 3.81E-03 |
| 56 | GO:0009718: anthocyanin-containing compound biosynthetic process | 4.16E-03 |
| 57 | GO:0009725: response to hormone | 4.16E-03 |
| 58 | GO:0009767: photosynthetic electron transport chain | 4.16E-03 |
| 59 | GO:0010588: cotyledon vascular tissue pattern formation | 4.16E-03 |
| 60 | GO:0006006: glucose metabolic process | 4.16E-03 |
| 61 | GO:0010143: cutin biosynthetic process | 4.52E-03 |
| 62 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.26E-03 |
| 63 | GO:0000027: ribosomal large subunit assembly | 5.65E-03 |
| 64 | GO:0031408: oxylipin biosynthetic process | 6.46E-03 |
| 65 | GO:0003333: amino acid transmembrane transport | 6.46E-03 |
| 66 | GO:0009734: auxin-activated signaling pathway | 6.64E-03 |
| 67 | GO:0042127: regulation of cell proliferation | 7.74E-03 |
| 68 | GO:0009735: response to cytokinin | 7.96E-03 |
| 69 | GO:0042335: cuticle development | 8.64E-03 |
| 70 | GO:0080022: primary root development | 8.64E-03 |
| 71 | GO:0010087: phloem or xylem histogenesis | 8.64E-03 |
| 72 | GO:0009416: response to light stimulus | 8.91E-03 |
| 73 | GO:0010305: leaf vascular tissue pattern formation | 9.10E-03 |
| 74 | GO:0009958: positive gravitropism | 9.10E-03 |
| 75 | GO:0010182: sugar mediated signaling pathway | 9.10E-03 |
| 76 | GO:0015986: ATP synthesis coupled proton transport | 9.58E-03 |
| 77 | GO:0030163: protein catabolic process | 1.16E-02 |
| 78 | GO:0016311: dephosphorylation | 1.59E-02 |
| 79 | GO:0009817: defense response to fungus, incompatible interaction | 1.65E-02 |
| 80 | GO:0018298: protein-chromophore linkage | 1.65E-02 |
| 81 | GO:0010311: lateral root formation | 1.71E-02 |
| 82 | GO:0006865: amino acid transport | 1.89E-02 |
| 83 | GO:0030001: metal ion transport | 2.14E-02 |
| 84 | GO:0016042: lipid catabolic process | 2.27E-02 |
| 85 | GO:0009744: response to sucrose | 2.34E-02 |
| 86 | GO:0009644: response to high light intensity | 2.47E-02 |
| 87 | GO:0006855: drug transmembrane transport | 2.61E-02 |
| 88 | GO:0009585: red, far-red light phototransduction | 2.89E-02 |
| 89 | GO:0048367: shoot system development | 3.33E-02 |
| 90 | GO:0048316: seed development | 3.33E-02 |
| 91 | GO:0009624: response to nematode | 3.72E-02 |
| 92 | GO:0051726: regulation of cell cycle | 3.88E-02 |
| 93 | GO:0009742: brassinosteroid mediated signaling pathway | 3.88E-02 |
| 94 | GO:0051301: cell division | 4.49E-02 |
| 95 | GO:0009790: embryo development | 4.87E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 2 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 3 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 4 | GO:0005528: FK506 binding | 1.44E-09 |
| 5 | GO:0019843: rRNA binding | 1.80E-07 |
| 6 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.11E-07 |
| 7 | GO:0043023: ribosomal large subunit binding | 5.26E-06 |
| 8 | GO:0003735: structural constituent of ribosome | 7.10E-06 |
| 9 | GO:0042586: peptide deformylase activity | 1.06E-04 |
| 10 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 1.06E-04 |
| 11 | GO:0016531: copper chaperone activity | 4.12E-04 |
| 12 | GO:0019829: cation-transporting ATPase activity | 4.12E-04 |
| 13 | GO:0001872: (1->3)-beta-D-glucan binding | 5.92E-04 |
| 14 | GO:0016851: magnesium chelatase activity | 5.92E-04 |
| 15 | GO:0010011: auxin binding | 7.86E-04 |
| 16 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 7.86E-04 |
| 17 | GO:0010328: auxin influx transmembrane transporter activity | 7.86E-04 |
| 18 | GO:0052793: pectin acetylesterase activity | 7.86E-04 |
| 19 | GO:0004392: heme oxygenase (decyclizing) activity | 7.86E-04 |
| 20 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 7.86E-04 |
| 21 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 1.21E-03 |
| 22 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 1.21E-03 |
| 23 | GO:0003993: acid phosphatase activity | 2.03E-03 |
| 24 | GO:0016788: hydrolase activity, acting on ester bonds | 2.05E-03 |
| 25 | GO:0005375: copper ion transmembrane transporter activity | 2.24E-03 |
| 26 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 2.24E-03 |
| 27 | GO:0052689: carboxylic ester hydrolase activity | 2.98E-03 |
| 28 | GO:0004871: signal transducer activity | 3.50E-03 |
| 29 | GO:0031072: heat shock protein binding | 4.16E-03 |
| 30 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 4.16E-03 |
| 31 | GO:0008146: sulfotransferase activity | 4.88E-03 |
| 32 | GO:0016746: transferase activity, transferring acyl groups | 4.89E-03 |
| 33 | GO:0008289: lipid binding | 6.54E-03 |
| 34 | GO:0022891: substrate-specific transmembrane transporter activity | 7.30E-03 |
| 35 | GO:0030570: pectate lyase activity | 7.30E-03 |
| 36 | GO:0003756: protein disulfide isomerase activity | 7.74E-03 |
| 37 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 9.10E-03 |
| 38 | GO:0004872: receptor activity | 1.01E-02 |
| 39 | GO:0016791: phosphatase activity | 1.21E-02 |
| 40 | GO:0016168: chlorophyll binding | 1.42E-02 |
| 41 | GO:0030247: polysaccharide binding | 1.54E-02 |
| 42 | GO:0008236: serine-type peptidase activity | 1.59E-02 |
| 43 | GO:0015238: drug transmembrane transporter activity | 1.71E-02 |
| 44 | GO:0005096: GTPase activator activity | 1.71E-02 |
| 45 | GO:0004222: metalloendopeptidase activity | 1.77E-02 |
| 46 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 1.77E-02 |
| 47 | GO:0003746: translation elongation factor activity | 1.95E-02 |
| 48 | GO:0004722: protein serine/threonine phosphatase activity | 2.07E-02 |
| 49 | GO:0050661: NADP binding | 2.14E-02 |
| 50 | GO:0015293: symporter activity | 2.54E-02 |
| 51 | GO:0015171: amino acid transmembrane transporter activity | 3.11E-02 |
| 52 | GO:0051082: unfolded protein binding | 3.72E-02 |
| 53 | GO:0016829: lyase activity | 4.61E-02 |
| 54 | GO:0004252: serine-type endopeptidase activity | 4.70E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044391: ribosomal subunit | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 2.45E-22 |
| 3 | GO:0009570: chloroplast stroma | 3.30E-15 |
| 4 | GO:0009543: chloroplast thylakoid lumen | 6.05E-14 |
| 5 | GO:0009579: thylakoid | 2.56E-13 |
| 6 | GO:0009535: chloroplast thylakoid membrane | 4.78E-12 |
| 7 | GO:0009941: chloroplast envelope | 5.70E-12 |
| 8 | GO:0009534: chloroplast thylakoid | 1.41E-10 |
| 9 | GO:0031977: thylakoid lumen | 8.28E-09 |
| 10 | GO:0031969: chloroplast membrane | 3.56E-06 |
| 11 | GO:0005840: ribosome | 4.93E-05 |
| 12 | GO:0009515: granal stacked thylakoid | 1.06E-04 |
| 13 | GO:0046658: anchored component of plasma membrane | 2.33E-04 |
| 14 | GO:0030095: chloroplast photosystem II | 2.49E-04 |
| 15 | GO:0009654: photosystem II oxygen evolving complex | 3.85E-04 |
| 16 | GO:0009528: plastid inner membrane | 4.12E-04 |
| 17 | GO:0070652: HAUS complex | 4.12E-04 |
| 18 | GO:0010007: magnesium chelatase complex | 4.12E-04 |
| 19 | GO:0031225: anchored component of membrane | 7.83E-04 |
| 20 | GO:0009527: plastid outer membrane | 7.86E-04 |
| 21 | GO:0019898: extrinsic component of membrane | 7.87E-04 |
| 22 | GO:0010319: stromule | 1.07E-03 |
| 23 | GO:0045261: proton-transporting ATP synthase complex, catalytic core F(1) | 1.21E-03 |
| 24 | GO:0009533: chloroplast stromal thylakoid | 1.70E-03 |
| 25 | GO:0009986: cell surface | 1.70E-03 |
| 26 | GO:0008180: COP9 signalosome | 2.53E-03 |
| 27 | GO:0000312: plastid small ribosomal subunit | 4.52E-03 |
| 28 | GO:0009532: plastid stroma | 6.46E-03 |
| 29 | GO:0009536: plastid | 7.21E-03 |
| 30 | GO:0009523: photosystem II | 1.01E-02 |
| 31 | GO:0019005: SCF ubiquitin ligase complex | 1.65E-02 |
| 32 | GO:0009707: chloroplast outer membrane | 1.65E-02 |
| 33 | GO:0016020: membrane | 1.66E-02 |
| 34 | GO:0022625: cytosolic large ribosomal subunit | 1.66E-02 |
| 35 | GO:0005819: spindle | 2.08E-02 |
| 36 | GO:0000502: proteasome complex | 2.89E-02 |
| 37 | GO:0005886: plasma membrane | 3.24E-02 |
| 38 | GO:0022626: cytosolic ribosome | 3.95E-02 |
| 39 | GO:0010287: plastoglobule | 4.20E-02 |
| 40 | GO:0009524: phragmoplast | 4.53E-02 |