GO Enrichment Analysis of Co-expressed Genes with
AT1G60490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032497: detection of lipopolysaccharide | 0.00E+00 |
| 2 | GO:0045087: innate immune response | 4.39E-05 |
| 3 | GO:0098721: uracil import across plasma membrane | 5.18E-05 |
| 4 | GO:0098702: adenine import across plasma membrane | 5.18E-05 |
| 5 | GO:0035266: meristem growth | 5.18E-05 |
| 6 | GO:0098710: guanine import across plasma membrane | 5.18E-05 |
| 7 | GO:0007292: female gamete generation | 5.18E-05 |
| 8 | GO:0010941: regulation of cell death | 5.18E-05 |
| 9 | GO:0035344: hypoxanthine transport | 5.18E-05 |
| 10 | GO:0071366: cellular response to indolebutyric acid stimulus | 5.18E-05 |
| 11 | GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine | 1.27E-04 |
| 12 | GO:0071712: ER-associated misfolded protein catabolic process | 1.27E-04 |
| 13 | GO:0051788: response to misfolded protein | 1.27E-04 |
| 14 | GO:0060968: regulation of gene silencing | 2.17E-04 |
| 15 | GO:0010498: proteasomal protein catabolic process | 2.17E-04 |
| 16 | GO:0042344: indole glucosinolate catabolic process | 2.17E-04 |
| 17 | GO:0048194: Golgi vesicle budding | 3.17E-04 |
| 18 | GO:1901000: regulation of response to salt stress | 3.17E-04 |
| 19 | GO:0070301: cellular response to hydrogen peroxide | 3.17E-04 |
| 20 | GO:0072334: UDP-galactose transmembrane transport | 3.17E-04 |
| 21 | GO:0009399: nitrogen fixation | 3.17E-04 |
| 22 | GO:0006542: glutamine biosynthetic process | 4.24E-04 |
| 23 | GO:0006090: pyruvate metabolic process | 5.39E-04 |
| 24 | GO:0007029: endoplasmic reticulum organization | 5.39E-04 |
| 25 | GO:0010311: lateral root formation | 6.55E-04 |
| 26 | GO:1900425: negative regulation of defense response to bacterium | 6.60E-04 |
| 27 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 6.60E-04 |
| 28 | GO:0015691: cadmium ion transport | 6.60E-04 |
| 29 | GO:0048827: phyllome development | 6.60E-04 |
| 30 | GO:0048232: male gamete generation | 6.60E-04 |
| 31 | GO:0043248: proteasome assembly | 6.60E-04 |
| 32 | GO:0006499: N-terminal protein myristoylation | 6.85E-04 |
| 33 | GO:0006694: steroid biosynthetic process | 7.87E-04 |
| 34 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 7.87E-04 |
| 35 | GO:0000122: negative regulation of transcription from RNA polymerase II promoter | 9.18E-04 |
| 36 | GO:0010078: maintenance of root meristem identity | 1.06E-03 |
| 37 | GO:1900150: regulation of defense response to fungus | 1.06E-03 |
| 38 | GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process | 1.19E-03 |
| 39 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.35E-03 |
| 40 | GO:0048364: root development | 1.36E-03 |
| 41 | GO:0048367: shoot system development | 1.60E-03 |
| 42 | GO:0048829: root cap development | 1.67E-03 |
| 43 | GO:0010629: negative regulation of gene expression | 1.67E-03 |
| 44 | GO:0010015: root morphogenesis | 1.84E-03 |
| 45 | GO:0052544: defense response by callose deposition in cell wall | 1.84E-03 |
| 46 | GO:0071365: cellular response to auxin stimulus | 2.01E-03 |
| 47 | GO:0006108: malate metabolic process | 2.19E-03 |
| 48 | GO:0055046: microgametogenesis | 2.19E-03 |
| 49 | GO:0009933: meristem structural organization | 2.38E-03 |
| 50 | GO:0090351: seedling development | 2.56E-03 |
| 51 | GO:0000162: tryptophan biosynthetic process | 2.76E-03 |
| 52 | GO:0016575: histone deacetylation | 3.16E-03 |
| 53 | GO:0051260: protein homooligomerization | 3.37E-03 |
| 54 | GO:0031408: oxylipin biosynthetic process | 3.37E-03 |
| 55 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.56E-03 |
| 56 | GO:0030433: ubiquitin-dependent ERAD pathway | 3.59E-03 |
| 57 | GO:0031348: negative regulation of defense response | 3.59E-03 |
| 58 | GO:0071456: cellular response to hypoxia | 3.59E-03 |
| 59 | GO:0071215: cellular response to abscisic acid stimulus | 3.80E-03 |
| 60 | GO:0009561: megagametogenesis | 4.03E-03 |
| 61 | GO:0042631: cellular response to water deprivation | 4.49E-03 |
| 62 | GO:0046323: glucose import | 4.72E-03 |
| 63 | GO:0048544: recognition of pollen | 4.96E-03 |
| 64 | GO:0048366: leaf development | 5.77E-03 |
| 65 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 6.28E-03 |
| 66 | GO:0051607: defense response to virus | 6.76E-03 |
| 67 | GO:0016579: protein deubiquitination | 6.76E-03 |
| 68 | GO:0016126: sterol biosynthetic process | 7.04E-03 |
| 69 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 7.31E-03 |
| 70 | GO:0009627: systemic acquired resistance | 7.59E-03 |
| 71 | GO:0042128: nitrate assimilation | 7.59E-03 |
| 72 | GO:0048573: photoperiodism, flowering | 7.88E-03 |
| 73 | GO:0006950: response to stress | 7.88E-03 |
| 74 | GO:0006468: protein phosphorylation | 8.08E-03 |
| 75 | GO:0008219: cell death | 8.46E-03 |
| 76 | GO:0009817: defense response to fungus, incompatible interaction | 8.46E-03 |
| 77 | GO:0016042: lipid catabolic process | 8.71E-03 |
| 78 | GO:0006099: tricarboxylic acid cycle | 1.03E-02 |
| 79 | GO:0046686: response to cadmium ion | 1.14E-02 |
| 80 | GO:0008283: cell proliferation | 1.19E-02 |
| 81 | GO:0000209: protein polyubiquitination | 1.23E-02 |
| 82 | GO:0009965: leaf morphogenesis | 1.30E-02 |
| 83 | GO:0006855: drug transmembrane transport | 1.33E-02 |
| 84 | GO:0031347: regulation of defense response | 1.37E-02 |
| 85 | GO:0007165: signal transduction | 1.65E-02 |
| 86 | GO:0006952: defense response | 1.65E-02 |
| 87 | GO:0009626: plant-type hypersensitive response | 1.74E-02 |
| 88 | GO:0009620: response to fungus | 1.77E-02 |
| 89 | GO:0009742: brassinosteroid mediated signaling pathway | 1.97E-02 |
| 90 | GO:0051726: regulation of cell cycle | 1.97E-02 |
| 91 | GO:0006511: ubiquitin-dependent protein catabolic process | 2.17E-02 |
| 92 | GO:0010150: leaf senescence | 2.79E-02 |
| 93 | GO:0006470: protein dephosphorylation | 3.07E-02 |
| 94 | GO:0007166: cell surface receptor signaling pathway | 3.07E-02 |
| 95 | GO:0009617: response to bacterium | 3.17E-02 |
| 96 | GO:0042742: defense response to bacterium | 3.24E-02 |
| 97 | GO:0009826: unidimensional cell growth | 3.71E-02 |
| 98 | GO:0010200: response to chitin | 4.55E-02 |
| 99 | GO:0046777: protein autophosphorylation | 4.66E-02 |
| 100 | GO:0006810: transport | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015591: D-ribose transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0015148: D-xylose transmembrane transporter activity | 0.00E+00 |
| 3 | GO:0005365: myo-inositol transmembrane transporter activity | 0.00E+00 |
| 4 | GO:0015576: sorbitol transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0015575: mannitol transmembrane transporter activity | 0.00E+00 |
| 6 | GO:0015207: adenine transmembrane transporter activity | 5.18E-05 |
| 7 | GO:0015168: glycerol transmembrane transporter activity | 5.18E-05 |
| 8 | GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity | 5.18E-05 |
| 9 | GO:0015208: guanine transmembrane transporter activity | 5.18E-05 |
| 10 | GO:0015294: solute:cation symporter activity | 5.18E-05 |
| 11 | GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity | 5.18E-05 |
| 12 | GO:0044390: ubiquitin-like protein conjugating enzyme binding | 1.27E-04 |
| 13 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 1.27E-04 |
| 14 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 2.17E-04 |
| 15 | GO:0016595: glutamate binding | 2.17E-04 |
| 16 | GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity | 2.17E-04 |
| 17 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 2.17E-04 |
| 18 | GO:0015086: cadmium ion transmembrane transporter activity | 3.17E-04 |
| 19 | GO:0005354: galactose transmembrane transporter activity | 3.17E-04 |
| 20 | GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor | 4.24E-04 |
| 21 | GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway | 4.24E-04 |
| 22 | GO:0004834: tryptophan synthase activity | 4.24E-04 |
| 23 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 4.24E-04 |
| 24 | GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity | 4.24E-04 |
| 25 | GO:0015210: uracil transmembrane transporter activity | 4.24E-04 |
| 26 | GO:0001106: RNA polymerase II transcription corepressor activity | 4.24E-04 |
| 27 | GO:0004470: malic enzyme activity | 4.24E-04 |
| 28 | GO:0005524: ATP binding | 5.19E-04 |
| 29 | GO:0004356: glutamate-ammonia ligase activity | 5.39E-04 |
| 30 | GO:0005459: UDP-galactose transmembrane transporter activity | 5.39E-04 |
| 31 | GO:0015145: monosaccharide transmembrane transporter activity | 5.39E-04 |
| 32 | GO:0008948: oxaloacetate decarboxylase activity | 5.39E-04 |
| 33 | GO:0036402: proteasome-activating ATPase activity | 6.60E-04 |
| 34 | GO:0004012: phospholipid-translocating ATPase activity | 7.87E-04 |
| 35 | GO:0004620: phospholipase activity | 9.18E-04 |
| 36 | GO:0004630: phospholipase D activity | 1.20E-03 |
| 37 | GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity | 1.20E-03 |
| 38 | GO:0071949: FAD binding | 1.35E-03 |
| 39 | GO:0004713: protein tyrosine kinase activity | 1.67E-03 |
| 40 | GO:0047372: acylglycerol lipase activity | 1.84E-03 |
| 41 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.19E-03 |
| 42 | GO:0004672: protein kinase activity | 2.20E-03 |
| 43 | GO:0017025: TBP-class protein binding | 2.56E-03 |
| 44 | GO:0004407: histone deacetylase activity | 2.96E-03 |
| 45 | GO:0036459: thiol-dependent ubiquitinyl hydrolase activity | 3.37E-03 |
| 46 | GO:0016301: kinase activity | 3.44E-03 |
| 47 | GO:0004674: protein serine/threonine kinase activity | 3.68E-03 |
| 48 | GO:0010181: FMN binding | 4.96E-03 |
| 49 | GO:0005355: glucose transmembrane transporter activity | 4.96E-03 |
| 50 | GO:0043531: ADP binding | 5.38E-03 |
| 51 | GO:0004843: thiol-dependent ubiquitin-specific protease activity | 5.46E-03 |
| 52 | GO:0051213: dioxygenase activity | 7.04E-03 |
| 53 | GO:0005215: transporter activity | 7.37E-03 |
| 54 | GO:0030247: polysaccharide binding | 7.88E-03 |
| 55 | GO:0005096: GTPase activator activity | 8.76E-03 |
| 56 | GO:0004222: metalloendopeptidase activity | 9.06E-03 |
| 57 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 9.99E-03 |
| 58 | GO:0035091: phosphatidylinositol binding | 1.26E-02 |
| 59 | GO:0051287: NAD binding | 1.37E-02 |
| 60 | GO:0016887: ATPase activity | 1.39E-02 |
| 61 | GO:0016298: lipase activity | 1.51E-02 |
| 62 | GO:0031625: ubiquitin protein ligase binding | 1.58E-02 |
| 63 | GO:0045735: nutrient reservoir activity | 1.66E-02 |
| 64 | GO:0022857: transmembrane transporter activity | 1.81E-02 |
| 65 | GO:0016746: transferase activity, transferring acyl groups | 1.93E-02 |
| 66 | GO:0030246: carbohydrate binding | 2.15E-02 |
| 67 | GO:0005516: calmodulin binding | 2.41E-02 |
| 68 | GO:0015144: carbohydrate transmembrane transporter activity | 2.52E-02 |
| 69 | GO:0005351: sugar:proton symporter activity | 2.75E-02 |
| 70 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.31E-02 |
| 71 | GO:0000287: magnesium ion binding | 3.76E-02 |
| 72 | GO:0046982: protein heterodimerization activity | 3.76E-02 |
| 73 | GO:0004497: monooxygenase activity | 4.44E-02 |
| 74 | GO:0004842: ubiquitin-protein transferase activity | 4.46E-02 |
| 75 | GO:0061630: ubiquitin protein ligase activity | 4.60E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005886: plasma membrane | 2.98E-07 |
| 2 | GO:0016021: integral component of membrane | 2.64E-05 |
| 3 | GO:0045252: oxoglutarate dehydrogenase complex | 5.18E-05 |
| 4 | GO:0036513: Derlin-1 retrotranslocation complex | 3.17E-04 |
| 5 | GO:0016020: membrane | 3.20E-04 |
| 6 | GO:0031597: cytosolic proteasome complex | 7.87E-04 |
| 7 | GO:0000118: histone deacetylase complex | 7.87E-04 |
| 8 | GO:0030173: integral component of Golgi membrane | 7.87E-04 |
| 9 | GO:0031595: nuclear proteasome complex | 9.18E-04 |
| 10 | GO:0008540: proteasome regulatory particle, base subcomplex | 1.50E-03 |
| 11 | GO:0016602: CCAAT-binding factor complex | 2.19E-03 |
| 12 | GO:0030176: integral component of endoplasmic reticulum membrane | 2.56E-03 |
| 13 | GO:0031410: cytoplasmic vesicle | 3.59E-03 |
| 14 | GO:0000785: chromatin | 5.71E-03 |
| 15 | GO:0000786: nucleosome | 9.68E-03 |
| 16 | GO:0005789: endoplasmic reticulum membrane | 1.11E-02 |
| 17 | GO:0090406: pollen tube | 1.19E-02 |
| 18 | GO:0000502: proteasome complex | 1.47E-02 |
| 19 | GO:0005623: cell | 2.26E-02 |
| 20 | GO:0005774: vacuolar membrane | 3.11E-02 |