Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G60260

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.22E-06
2GO:0006438: valyl-tRNA aminoacylation3.22E-06
3GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.68E-05
4GO:0033014: tetrapyrrole biosynthetic process2.64E-05
5GO:2001141: regulation of RNA biosynthetic process2.64E-05
6GO:0009902: chloroplast relocation3.75E-05
7GO:0010555: response to mannitol7.81E-05
8GO:2000067: regulation of root morphogenesis7.81E-05
9GO:0016559: peroxisome fission1.10E-04
10GO:0071482: cellular response to light stimulus1.27E-04
11GO:0007186: G-protein coupled receptor signaling pathway1.27E-04
12GO:0006783: heme biosynthetic process1.45E-04
13GO:0006779: porphyrin-containing compound biosynthetic process1.63E-04
14GO:0019684: photosynthesis, light reaction2.02E-04
15GO:0006352: DNA-templated transcription, initiation2.02E-04
16GO:0009750: response to fructose2.02E-04
17GO:0009767: photosynthetic electron transport chain2.43E-04
18GO:0007031: peroxisome organization2.85E-04
19GO:0006418: tRNA aminoacylation for protein translation3.51E-04
20GO:0006730: one-carbon metabolic process3.97E-04
21GO:0010082: regulation of root meristem growth4.21E-04
22GO:0009749: response to glucose5.68E-04
23GO:0009744: response to sucrose1.22E-03
24GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.30E-03
25GO:0006810: transport1.76E-02
26GO:0009737: response to abscisic acid2.30E-02
27GO:0009793: embryo development ending in seed dormancy2.44E-02
28GO:0016310: phosphorylation2.54E-02
RankGO TermAdjusted P value
1GO:0004832: valine-tRNA ligase activity3.22E-06
2GO:0004325: ferrochelatase activity3.22E-06
3GO:0004326: tetrahydrofolylpolyglutamate synthase activity8.96E-06
4GO:0001664: G-protein coupled receptor binding1.68E-05
5GO:0031683: G-protein beta/gamma-subunit complex binding1.68E-05
6GO:0001053: plastid sigma factor activity3.75E-05
7GO:0016987: sigma factor activity3.75E-05
8GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity7.81E-05
9GO:0004812: aminoacyl-tRNA ligase activity4.68E-04
10GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.48E-03
11GO:0042802: identical protein binding3.17E-03
12GO:0005524: ATP binding4.58E-03
13GO:0004871: signal transducer activity4.90E-03
14GO:0003924: GTPase activity5.48E-03
15GO:0005525: GTP binding1.16E-02
16GO:0005509: calcium ion binding1.27E-02
17GO:0016301: kinase activity1.80E-02
18GO:0046872: metal ion binding3.92E-02
19GO:0004674: protein serine/threonine kinase activity4.19E-02
RankGO TermAdjusted P value
1GO:0009344: nitrite reductase complex [NAD(P)H]3.22E-06
2GO:0009507: chloroplast8.19E-06
3GO:0055035: plastid thylakoid membrane4.99E-05
4GO:0005779: integral component of peroxisomal membrane1.27E-04
5GO:0030095: chloroplast photosystem II2.64E-04
6GO:0009654: photosystem II oxygen evolving complex3.51E-04
7GO:0019898: extrinsic component of membrane5.68E-04
8GO:0005778: peroxisomal membrane6.98E-04
9GO:0009707: chloroplast outer membrane8.92E-04
10GO:0005834: heterotrimeric G-protein complex1.73E-03
11GO:0009543: chloroplast thylakoid lumen2.18E-03
12GO:0005623: cell2.21E-03
13GO:0009535: chloroplast thylakoid membrane2.40E-03
14GO:0031969: chloroplast membrane4.20E-03
15GO:0005777: peroxisome8.99E-03
16GO:0009534: chloroplast thylakoid9.31E-03
17GO:0005886: plasma membrane2.89E-02
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Gene type



Gene DE type