GO Enrichment Analysis of Co-expressed Genes with
AT1G60010
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0019265: glycine biosynthetic process, by transamination of glyoxylate | 0.00E+00 |
| 3 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 4 | GO:0009443: pyridoxal 5'-phosphate salvage | 3.50E-05 |
| 5 | GO:0006723: cuticle hydrocarbon biosynthetic process | 3.50E-05 |
| 6 | GO:0006094: gluconeogenesis | 4.39E-05 |
| 7 | GO:0019253: reductive pentose-phosphate cycle | 5.08E-05 |
| 8 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 8.78E-05 |
| 9 | GO:0006000: fructose metabolic process | 1.52E-04 |
| 10 | GO:0043447: alkane biosynthetic process | 1.52E-04 |
| 11 | GO:0046836: glycolipid transport | 2.25E-04 |
| 12 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 2.25E-04 |
| 13 | GO:0043097: pyrimidine nucleoside salvage | 3.89E-04 |
| 14 | GO:0006206: pyrimidine nucleobase metabolic process | 4.78E-04 |
| 15 | GO:0009853: photorespiration | 4.85E-04 |
| 16 | GO:0042026: protein refolding | 5.70E-04 |
| 17 | GO:0006458: 'de novo' protein folding | 5.70E-04 |
| 18 | GO:0009854: oxidative photosynthetic carbon pathway | 5.70E-04 |
| 19 | GO:0006401: RNA catabolic process | 6.66E-04 |
| 20 | GO:0009231: riboflavin biosynthetic process | 7.68E-04 |
| 21 | GO:0048564: photosystem I assembly | 7.68E-04 |
| 22 | GO:0008610: lipid biosynthetic process | 7.68E-04 |
| 23 | GO:0006002: fructose 6-phosphate metabolic process | 8.71E-04 |
| 24 | GO:0071482: cellular response to light stimulus | 8.71E-04 |
| 25 | GO:0006098: pentose-phosphate shunt | 9.78E-04 |
| 26 | GO:0000373: Group II intron splicing | 9.78E-04 |
| 27 | GO:0055114: oxidation-reduction process | 1.28E-03 |
| 28 | GO:0009773: photosynthetic electron transport in photosystem I | 1.32E-03 |
| 29 | GO:0018119: peptidyl-cysteine S-nitrosylation | 1.32E-03 |
| 30 | GO:0009725: response to hormone | 1.57E-03 |
| 31 | GO:0009767: photosynthetic electron transport chain | 1.57E-03 |
| 32 | GO:0005986: sucrose biosynthetic process | 1.57E-03 |
| 33 | GO:0010025: wax biosynthetic process | 1.97E-03 |
| 34 | GO:0061077: chaperone-mediated protein folding | 2.41E-03 |
| 35 | GO:0016226: iron-sulfur cluster assembly | 2.56E-03 |
| 36 | GO:0009658: chloroplast organization | 2.99E-03 |
| 37 | GO:0042631: cellular response to water deprivation | 3.20E-03 |
| 38 | GO:0042335: cuticle development | 3.20E-03 |
| 39 | GO:0006520: cellular amino acid metabolic process | 3.36E-03 |
| 40 | GO:0019252: starch biosynthetic process | 3.70E-03 |
| 41 | GO:0010583: response to cyclopentenone | 4.06E-03 |
| 42 | GO:0048235: pollen sperm cell differentiation | 4.06E-03 |
| 43 | GO:0001666: response to hypoxia | 4.99E-03 |
| 44 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 5.18E-03 |
| 45 | GO:0006810: transport | 5.56E-03 |
| 46 | GO:0010411: xyloglucan metabolic process | 5.58E-03 |
| 47 | GO:0048481: plant ovule development | 5.99E-03 |
| 48 | GO:0016051: carbohydrate biosynthetic process | 7.05E-03 |
| 49 | GO:0009744: response to sucrose | 8.41E-03 |
| 50 | GO:0006364: rRNA processing | 1.04E-02 |
| 51 | GO:0006096: glycolytic process | 1.17E-02 |
| 52 | GO:0048316: seed development | 1.19E-02 |
| 53 | GO:0009742: brassinosteroid mediated signaling pathway | 1.38E-02 |
| 54 | GO:0009058: biosynthetic process | 1.62E-02 |
| 55 | GO:0040008: regulation of growth | 1.89E-02 |
| 56 | GO:0042742: defense response to bacterium | 1.96E-02 |
| 57 | GO:0005975: carbohydrate metabolic process | 2.97E-02 |
| 58 | GO:0080167: response to karrikin | 3.11E-02 |
| 59 | GO:0046777: protein autophosphorylation | 3.27E-02 |
| 60 | GO:0045454: cell redox homeostasis | 3.54E-02 |
| 61 | GO:0045892: negative regulation of transcription, DNA-templated | 3.58E-02 |
| 62 | GO:0032259: methylation | 3.98E-02 |
| 63 | GO:0006629: lipid metabolic process | 4.11E-02 |
| 64 | GO:0006397: mRNA processing | 4.24E-02 |
| 65 | GO:0009793: embryo development ending in seed dormancy | 4.52E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050281: serine-glyoxylate transaminase activity | 0.00E+00 |
| 2 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0004760: serine-pyruvate transaminase activity | 0.00E+00 |
| 5 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 6 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 7 | GO:0008974: phosphoribulokinase activity | 0.00E+00 |
| 8 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 9 | GO:0008465: glycerate dehydrogenase activity | 0.00E+00 |
| 10 | GO:0004033: aldo-keto reductase (NADP) activity | 1.08E-05 |
| 11 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 8.78E-05 |
| 12 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 8.78E-05 |
| 13 | GO:0032947: protein complex scaffold | 1.52E-04 |
| 14 | GO:0003935: GTP cyclohydrolase II activity | 1.52E-04 |
| 15 | GO:0070402: NADPH binding | 1.52E-04 |
| 16 | GO:0017089: glycolipid transporter activity | 2.25E-04 |
| 17 | GO:0051861: glycolipid binding | 3.05E-04 |
| 18 | GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | 3.05E-04 |
| 19 | GO:0008453: alanine-glyoxylate transaminase activity | 3.05E-04 |
| 20 | GO:0004332: fructose-bisphosphate aldolase activity | 4.78E-04 |
| 21 | GO:0042578: phosphoric ester hydrolase activity | 4.78E-04 |
| 22 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 5.70E-04 |
| 23 | GO:0004849: uridine kinase activity | 5.70E-04 |
| 24 | GO:0005198: structural molecule activity | 6.92E-04 |
| 25 | GO:0016491: oxidoreductase activity | 8.71E-04 |
| 26 | GO:0044183: protein binding involved in protein folding | 1.32E-03 |
| 27 | GO:0000175: 3'-5'-exoribonuclease activity | 1.57E-03 |
| 28 | GO:0008266: poly(U) RNA binding | 1.70E-03 |
| 29 | GO:0051536: iron-sulfur cluster binding | 2.12E-03 |
| 30 | GO:0043424: protein histidine kinase binding | 2.26E-03 |
| 31 | GO:0004540: ribonuclease activity | 2.41E-03 |
| 32 | GO:0004176: ATP-dependent peptidase activity | 2.41E-03 |
| 33 | GO:0004872: receptor activity | 3.70E-03 |
| 34 | GO:0048038: quinone binding | 3.88E-03 |
| 35 | GO:0016413: O-acetyltransferase activity | 4.80E-03 |
| 36 | GO:0009055: electron carrier activity | 5.83E-03 |
| 37 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.61E-03 |
| 38 | GO:0051287: NAD binding | 9.61E-03 |
| 39 | GO:0051082: unfolded protein binding | 1.33E-02 |
| 40 | GO:0015035: protein disulfide oxidoreductase activity | 1.36E-02 |
| 41 | GO:0030170: pyridoxal phosphate binding | 1.68E-02 |
| 42 | GO:0005506: iron ion binding | 1.93E-02 |
| 43 | GO:0003824: catalytic activity | 2.15E-02 |
| 44 | GO:0008168: methyltransferase activity | 2.60E-02 |
| 45 | GO:0050660: flavin adenine dinucleotide binding | 2.96E-02 |
| 46 | GO:0008233: peptidase activity | 3.08E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 3.39E-08 |
| 2 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.78E-05 |
| 3 | GO:0009344: nitrite reductase complex [NAD(P)H] | 3.50E-05 |
| 4 | GO:0009534: chloroplast thylakoid | 2.55E-04 |
| 5 | GO:0009535: chloroplast thylakoid membrane | 3.73E-04 |
| 6 | GO:0000178: exosome (RNase complex) | 3.89E-04 |
| 7 | GO:0009570: chloroplast stroma | 5.97E-04 |
| 8 | GO:0048046: apoplast | 8.83E-04 |
| 9 | GO:0009941: chloroplast envelope | 1.37E-03 |
| 10 | GO:0030095: chloroplast photosystem II | 1.70E-03 |
| 11 | GO:0009654: photosystem II oxygen evolving complex | 2.26E-03 |
| 12 | GO:0019898: extrinsic component of membrane | 3.70E-03 |
| 13 | GO:0010319: stromule | 4.60E-03 |
| 14 | GO:0030529: intracellular ribonucleoprotein complex | 4.99E-03 |
| 15 | GO:0000932: P-body | 4.99E-03 |
| 16 | GO:0005777: peroxisome | 1.11E-02 |
| 17 | GO:0009579: thylakoid | 1.15E-02 |
| 18 | GO:0010287: plastoglobule | 1.50E-02 |
| 19 | GO:0009543: chloroplast thylakoid lumen | 1.56E-02 |
| 20 | GO:0031969: chloroplast membrane | 3.11E-02 |