Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G59960

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009609: response to symbiotic bacterium6.71E-06
2GO:0010541: acropetal auxin transport1.83E-05
3GO:0010359: regulation of anion channel activity3.35E-05
4GO:0055074: calcium ion homeostasis3.35E-05
5GO:0015696: ammonium transport5.17E-05
6GO:0043207: response to external biotic stimulus5.17E-05
7GO:0072488: ammonium transmembrane transport7.23E-05
8GO:0046283: anthocyanin-containing compound metabolic process9.53E-05
9GO:0045040: protein import into mitochondrial outer membrane1.20E-04
10GO:0009626: plant-type hypersensitive response1.36E-04
11GO:0006457: protein folding1.37E-04
12GO:0009610: response to symbiotic fungus1.74E-04
13GO:0006605: protein targeting2.03E-04
14GO:0010204: defense response signaling pathway, resistance gene-independent2.33E-04
15GO:0006032: chitin catabolic process3.28E-04
16GO:0010215: cellulose microfibril organization3.28E-04
17GO:0006626: protein targeting to mitochondrion4.30E-04
18GO:0016998: cell wall macromolecule catabolic process6.53E-04
19GO:0000413: protein peptidyl-prolyl isomerization8.55E-04
20GO:0016049: cell growth1.50E-03
21GO:0009817: defense response to fungus, incompatible interaction1.55E-03
22GO:0006499: N-terminal protein myristoylation1.65E-03
23GO:0048527: lateral root development1.70E-03
24GO:0010119: regulation of stomatal movement1.70E-03
25GO:0006099: tricarboxylic acid cycle1.86E-03
26GO:0051707: response to other organism2.14E-03
27GO:0009620: response to fungus3.12E-03
28GO:0009624: response to nematode3.32E-03
29GO:0018105: peptidyl-serine phosphorylation3.38E-03
30GO:0009845: seed germination4.08E-03
31GO:0009617: response to bacterium5.44E-03
32GO:0042254: ribosome biogenesis6.59E-03
33GO:0009723: response to ethylene7.20E-03
34GO:0050832: defense response to fungus7.60E-03
35GO:0046777: protein autophosphorylation7.91E-03
36GO:0006886: intracellular protein transport8.75E-03
37GO:0009751: response to salicylic acid9.82E-03
38GO:0009408: response to heat9.92E-03
39GO:0009753: response to jasmonic acid1.04E-02
40GO:0009738: abscisic acid-activated signaling pathway1.45E-02
41GO:0035556: intracellular signal transduction1.55E-02
42GO:0006468: protein phosphorylation1.99E-02
43GO:0042742: defense response to bacterium2.46E-02
44GO:0006979: response to oxidative stress2.47E-02
45GO:0005975: carbohydrate metabolic process3.31E-02
46GO:0046686: response to cadmium ion3.37E-02
RankGO TermAdjusted P value
1GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity6.71E-06
2GO:0048037: cofactor binding6.71E-06
3GO:0004776: succinate-CoA ligase (GDP-forming) activity1.83E-05
4GO:0004775: succinate-CoA ligase (ADP-forming) activity1.83E-05
5GO:0008519: ammonium transmembrane transporter activity1.20E-04
6GO:0051082: unfolded protein binding1.55E-04
7GO:0004568: chitinase activity3.28E-04
8GO:0031072: heat shock protein binding4.30E-04
9GO:0009931: calcium-dependent protein serine/threonine kinase activity1.40E-03
10GO:0004683: calmodulin-dependent protein kinase activity1.45E-03
11GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.55E-03
12GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.38E-03
13GO:0005509: calcium ion binding2.39E-03
14GO:0031625: ubiquitin protein ligase binding2.80E-03
15GO:0046872: metal ion binding5.48E-03
16GO:0004674: protein serine/threonine kinase activity1.26E-02
17GO:0000166: nucleotide binding1.49E-02
18GO:0030246: carbohydrate binding1.84E-02
19GO:0005507: copper ion binding1.91E-02
20GO:0005516: calmodulin binding1.99E-02
21GO:0005525: GTP binding2.12E-02
22GO:0004842: ubiquitin-protein transferase activity3.10E-02
23GO:0004672: protein kinase activity3.23E-02
24GO:0003735: structural constituent of ribosome4.02E-02
25GO:0016301: kinase activity4.32E-02
RankGO TermAdjusted P value
1GO:0005742: mitochondrial outer membrane translocase complex2.33E-04
2GO:0005741: mitochondrial outer membrane6.53E-04
3GO:0005744: mitochondrial inner membrane presequence translocase complex7.72E-04
4GO:0005886: plasma membrane1.10E-03
5GO:0022626: cytosolic ribosome1.25E-03
6GO:0005788: endoplasmic reticulum lumen1.35E-03
7GO:0000151: ubiquitin ligase complex1.55E-03
8GO:0005623: cell3.93E-03
9GO:0022625: cytosolic large ribosomal subunit7.82E-03
10GO:0005743: mitochondrial inner membrane9.42E-03
11GO:0005618: cell wall1.01E-02
12GO:0005783: endoplasmic reticulum1.80E-02
13GO:0031225: anchored component of membrane2.04E-02
14GO:0005737: cytoplasm2.19E-02
15GO:0005622: intracellular2.24E-02
16GO:0005840: ribosome2.54E-02
17GO:0005789: endoplasmic reticulum membrane3.33E-02
18GO:0009506: plasmodesma3.41E-02
19GO:0016021: integral component of membrane3.82E-02
20GO:0005829: cytosol4.33E-02
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Gene type



Gene DE type