Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G59820

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006983: ER overload response0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
4GO:0002764: immune response-regulating signaling pathway0.00E+00
5GO:0019481: L-alanine catabolic process, by transamination0.00E+00
6GO:0032497: detection of lipopolysaccharide0.00E+00
7GO:0043066: negative regulation of apoptotic process0.00E+00
8GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.37E-05
9GO:0006468: protein phosphorylation8.40E-05
10GO:0098721: uracil import across plasma membrane9.14E-05
11GO:0042759: long-chain fatty acid biosynthetic process9.14E-05
12GO:0098702: adenine import across plasma membrane9.14E-05
13GO:0098710: guanine import across plasma membrane9.14E-05
14GO:0099132: ATP hydrolysis coupled cation transmembrane transport9.14E-05
15GO:0010941: regulation of cell death9.14E-05
16GO:0035344: hypoxanthine transport9.14E-05
17GO:0006643: membrane lipid metabolic process9.14E-05
18GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine2.16E-04
19GO:0060151: peroxisome localization2.16E-04
20GO:0080183: response to photooxidative stress2.16E-04
21GO:0051645: Golgi localization2.16E-04
22GO:0006212: uracil catabolic process2.16E-04
23GO:0019483: beta-alanine biosynthetic process2.16E-04
24GO:0016045: detection of bacterium3.61E-04
25GO:0010359: regulation of anion channel activity3.61E-04
26GO:0090436: leaf pavement cell development3.61E-04
27GO:0015783: GDP-fucose transport3.61E-04
28GO:0010498: proteasomal protein catabolic process3.61E-04
29GO:0051646: mitochondrion localization3.61E-04
30GO:1900055: regulation of leaf senescence3.61E-04
31GO:0046513: ceramide biosynthetic process5.20E-04
32GO:0072334: UDP-galactose transmembrane transport5.20E-04
33GO:0009399: nitrogen fixation5.20E-04
34GO:0006542: glutamine biosynthetic process6.90E-04
35GO:0006090: pyruvate metabolic process8.73E-04
36GO:0010150: leaf senescence9.06E-04
37GO:0002238: response to molecule of fungal origin1.07E-03
38GO:1900425: negative regulation of defense response to bacterium1.07E-03
39GO:0006694: steroid biosynthetic process1.27E-03
40GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response1.27E-03
41GO:0010044: response to aluminum ion1.49E-03
42GO:0046470: phosphatidylcholine metabolic process1.49E-03
43GO:0045087: innate immune response1.60E-03
44GO:1900150: regulation of defense response to fungus1.72E-03
45GO:0010204: defense response signaling pathway, resistance gene-independent1.96E-03
46GO:0043562: cellular response to nitrogen levels1.96E-03
47GO:0009808: lignin metabolic process1.96E-03
48GO:0015780: nucleotide-sugar transport2.21E-03
49GO:0009051: pentose-phosphate shunt, oxidative branch2.21E-03
50GO:0046777: protein autophosphorylation2.22E-03
51GO:0006812: cation transport2.56E-03
52GO:0043069: negative regulation of programmed cell death2.75E-03
53GO:0009809: lignin biosynthetic process2.75E-03
54GO:0000038: very long-chain fatty acid metabolic process3.03E-03
55GO:0052544: defense response by callose deposition in cell wall3.03E-03
56GO:0071365: cellular response to auxin stimulus3.32E-03
57GO:0000266: mitochondrial fission3.32E-03
58GO:0012501: programmed cell death3.32E-03
59GO:0006108: malate metabolic process3.63E-03
60GO:2000028: regulation of photoperiodism, flowering3.63E-03
61GO:0055046: microgametogenesis3.63E-03
62GO:0006807: nitrogen compound metabolic process3.63E-03
63GO:0030048: actin filament-based movement3.63E-03
64GO:0042742: defense response to bacterium3.89E-03
65GO:0048467: gynoecium development3.93E-03
66GO:0070588: calcium ion transmembrane transport4.26E-03
67GO:0009969: xyloglucan biosynthetic process4.26E-03
68GO:0080188: RNA-directed DNA methylation4.26E-03
69GO:0000162: tryptophan biosynthetic process4.58E-03
70GO:2000377: regulation of reactive oxygen species metabolic process4.92E-03
71GO:0080147: root hair cell development4.92E-03
72GO:0006952: defense response5.43E-03
73GO:0051260: protein homooligomerization5.62E-03
74GO:0035428: hexose transmembrane transport5.98E-03
75GO:0006012: galactose metabolic process6.35E-03
76GO:0010584: pollen exine formation6.73E-03
77GO:0009561: megagametogenesis6.73E-03
78GO:0046686: response to cadmium ion7.61E-03
79GO:0046323: glucose import7.91E-03
80GO:0006885: regulation of pH7.91E-03
81GO:0009617: response to bacterium8.00E-03
82GO:0048544: recognition of pollen8.32E-03
83GO:0009851: auxin biosynthetic process8.74E-03
84GO:0009630: gravitropism9.60E-03
85GO:0010090: trichome morphogenesis1.00E-02
86GO:0006904: vesicle docking involved in exocytosis1.09E-02
87GO:0016126: sterol biosynthetic process1.19E-02
88GO:0001666: response to hypoxia1.19E-02
89GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.23E-02
90GO:0009816: defense response to bacterium, incompatible interaction1.23E-02
91GO:0042128: nitrate assimilation1.28E-02
92GO:0010200: response to chitin1.33E-02
93GO:0048767: root hair elongation1.48E-02
94GO:0009813: flavonoid biosynthetic process1.48E-02
95GO:0006499: N-terminal protein myristoylation1.54E-02
96GO:0009407: toxin catabolic process1.54E-02
97GO:0006099: tricarboxylic acid cycle1.75E-02
98GO:0032259: methylation1.83E-02
99GO:0009751: response to salicylic acid1.88E-02
100GO:0006887: exocytosis1.91E-02
101GO:0050832: defense response to fungus2.01E-02
102GO:0000209: protein polyubiquitination2.09E-02
103GO:0008643: carbohydrate transport2.14E-02
104GO:0009636: response to toxic substance2.20E-02
105GO:0031347: regulation of defense response2.32E-02
106GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.32E-02
107GO:0009846: pollen germination2.38E-02
108GO:0006813: potassium ion transport2.51E-02
109GO:0009626: plant-type hypersensitive response2.96E-02
110GO:0009620: response to fungus3.02E-02
111GO:0009735: response to cytokinin3.09E-02
112GO:0016569: covalent chromatin modification3.09E-02
113GO:0018105: peptidyl-serine phosphorylation3.29E-02
114GO:0051726: regulation of cell cycle3.36E-02
115GO:0009742: brassinosteroid mediated signaling pathway3.36E-02
116GO:0007165: signal transduction4.21E-02
RankGO TermAdjusted P value
1GO:0003837: beta-ureidopropionase activity0.00E+00
2GO:0004383: guanylate cyclase activity1.70E-06
3GO:0005524: ATP binding8.03E-06
4GO:0004674: protein serine/threonine kinase activity1.54E-05
5GO:0016301: kinase activity8.79E-05
6GO:0015207: adenine transmembrane transporter activity9.14E-05
7GO:0019707: protein-cysteine S-acyltransferase activity9.14E-05
8GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity9.14E-05
9GO:0033984: indole-3-glycerol-phosphate lyase activity9.14E-05
10GO:0015208: guanine transmembrane transporter activity9.14E-05
11GO:0015294: solute:cation symporter activity9.14E-05
12GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity9.14E-05
13GO:0050291: sphingosine N-acyltransferase activity2.16E-04
14GO:0030742: GTP-dependent protein binding2.16E-04
15GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity2.16E-04
16GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.61E-04
17GO:0016595: glutamate binding3.61E-04
18GO:0004473: malate dehydrogenase (decarboxylating) (NADP+) activity3.61E-04
19GO:0005457: GDP-fucose transmembrane transporter activity3.61E-04
20GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity3.61E-04
21GO:0001653: peptide receptor activity5.20E-04
22GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity5.20E-04
23GO:0016652: oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor6.90E-04
24GO:0015368: calcium:cation antiporter activity6.90E-04
25GO:0004834: tryptophan synthase activity6.90E-04
26GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor6.90E-04
27GO:0004471: malate dehydrogenase (decarboxylating) (NAD+) activity6.90E-04
28GO:0015369: calcium:proton antiporter activity6.90E-04
29GO:0015210: uracil transmembrane transporter activity6.90E-04
30GO:0019199: transmembrane receptor protein kinase activity6.90E-04
31GO:0004470: malic enzyme activity6.90E-04
32GO:0070696: transmembrane receptor protein serine/threonine kinase binding8.73E-04
33GO:0004356: glutamate-ammonia ligase activity8.73E-04
34GO:0045431: flavonol synthase activity8.73E-04
35GO:0005459: UDP-galactose transmembrane transporter activity8.73E-04
36GO:0008948: oxaloacetate decarboxylase activity8.73E-04
37GO:0005546: phosphatidylinositol-4,5-bisphosphate binding8.73E-04
38GO:0017137: Rab GTPase binding8.73E-04
39GO:0004012: phospholipid-translocating ATPase activity1.27E-03
40GO:0015491: cation:cation antiporter activity1.72E-03
41GO:0004034: aldose 1-epimerase activity1.72E-03
42GO:0052747: sinapyl alcohol dehydrogenase activity1.72E-03
43GO:0004630: phospholipase D activity1.96E-03
44GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity1.96E-03
45GO:0008171: O-methyltransferase activity2.75E-03
46GO:0004713: protein tyrosine kinase activity2.75E-03
47GO:0045551: cinnamyl-alcohol dehydrogenase activity3.32E-03
48GO:0005388: calcium-transporting ATPase activity3.63E-03
49GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.63E-03
50GO:0022857: transmembrane transporter activity3.67E-03
51GO:0003774: motor activity3.93E-03
52GO:0019706: protein-cysteine S-palmitoyltransferase activity5.62E-03
53GO:0004672: protein kinase activity6.96E-03
54GO:0005451: monovalent cation:proton antiporter activity7.51E-03
55GO:0030276: clathrin binding7.91E-03
56GO:0016853: isomerase activity8.32E-03
57GO:0015299: solute:proton antiporter activity8.32E-03
58GO:0010181: FMN binding8.32E-03
59GO:0005355: glucose transmembrane transporter activity8.32E-03
60GO:0015385: sodium:proton antiporter activity1.00E-02
61GO:0005516: calmodulin binding1.16E-02
62GO:0009931: calcium-dependent protein serine/threonine kinase activity1.28E-02
63GO:0004683: calmodulin-dependent protein kinase activity1.33E-02
64GO:0030247: polysaccharide binding1.33E-02
65GO:0008757: S-adenosylmethionine-dependent methyltransferase activity1.38E-02
66GO:0005509: calcium ion binding1.52E-02
67GO:0005515: protein binding1.76E-02
68GO:0008422: beta-glucosidase activity1.80E-02
69GO:0004364: glutathione transferase activity1.97E-02
70GO:0051537: 2 iron, 2 sulfur cluster binding2.14E-02
71GO:0005198: structural molecule activity2.20E-02
72GO:0051287: NAD binding2.32E-02
73GO:0031625: ubiquitin protein ligase binding2.70E-02
74GO:0003779: actin binding3.16E-02
75GO:0015035: protein disulfide oxidoreductase activity3.29E-02
76GO:0016746: transferase activity, transferring acyl groups3.29E-02
77GO:0004386: helicase activity3.43E-02
78GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen3.85E-02
79GO:0015144: carbohydrate transmembrane transporter activity4.30E-02
80GO:0030246: carbohydrate binding4.53E-02
81GO:0015297: antiporter activity4.60E-02
82GO:0005351: sugar:proton symporter activity4.68E-02
83GO:0008017: microtubule binding4.91E-02
RankGO TermAdjusted P value
1GO:0005886: plasma membrane2.04E-11
2GO:0016021: integral component of membrane1.04E-07
3GO:0000138: Golgi trans cisterna9.14E-05
4GO:0045252: oxoglutarate dehydrogenase complex9.14E-05
5GO:0016020: membrane2.74E-04
6GO:0070062: extracellular exosome5.20E-04
7GO:0030173: integral component of Golgi membrane1.27E-03
8GO:0016459: myosin complex2.75E-03
9GO:0030176: integral component of endoplasmic reticulum membrane4.26E-03
10GO:0005769: early endosome4.58E-03
11GO:0005829: cytosol5.42E-03
12GO:0005789: endoplasmic reticulum membrane7.39E-03
13GO:0000145: exocyst9.60E-03
14GO:0009506: plasmodesma1.09E-02
15GO:0000786: nucleosome1.64E-02
16GO:0090406: pollen tube2.03E-02
17GO:0000139: Golgi membrane2.47E-02
18GO:0005783: endoplasmic reticulum2.51E-02
19GO:0005635: nuclear envelope2.63E-02
20GO:0005618: cell wall3.08E-02
21GO:0012505: endomembrane system3.16E-02
22GO:0009524: phragmoplast3.93E-02
23GO:0009705: plant-type vacuole membrane4.75E-02
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Gene type



Gene DE type