co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G56720

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0045014: negative regulation of transcription by glucose	0.00E+00
2	GO:0070455: positive regulation of heme biosynthetic process	0.00E+00
3	GO:0033014: tetrapyrrole biosynthetic process	1.30E-04
4	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	1.30E-04
5	GO:0015995: chlorophyll biosynthetic process	1.54E-04
6	GO:0006751: glutathione catabolic process	2.85E-04
7	GO:1900057: positive regulation of leaf senescence	4.02E-04
8	GO:0009610: response to symbiotic fungus	4.02E-04
9	GO:0006783: heme biosynthetic process	5.93E-04
10	GO:0048589: developmental growth	5.93E-04
11	GO:0006535: cysteine biosynthetic process from serine	7.30E-04
12	GO:0010215: cellulose microfibril organization	7.30E-04
13	GO:1903507: negative regulation of nucleic acid-templated transcription	8.02E-04
14	GO:0010152: pollen maturation	8.75E-04
15	GO:0016024: CDP-diacylglycerol biosynthetic process	8.75E-04
16	GO:0009767: photosynthetic electron transport chain	9.49E-04
17	GO:0010588: cotyledon vascular tissue pattern formation	9.49E-04
18	GO:0010143: cutin biosynthetic process	1.02E-03
19	GO:0009825: multidimensional cell growth	1.10E-03
20	GO:0019344: cysteine biosynthetic process	1.26E-03
21	GO:0048511: rhythmic process	1.44E-03
22	GO:0009733: response to auxin	1.45E-03
23	GO:2000022: regulation of jasmonic acid mediated signaling pathway	1.52E-03
24	GO:0071369: cellular response to ethylene stimulus	1.61E-03
25	GO:0048443: stamen development	1.70E-03
26	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	1.77E-03
27	GO:0080022: primary root development	1.89E-03
28	GO:0010087: phloem or xylem histogenesis	1.89E-03
29	GO:0010305: leaf vascular tissue pattern formation	1.99E-03
30	GO:0042752: regulation of circadian rhythm	2.09E-03
31	GO:0009791: post-embryonic development	2.19E-03
32	GO:0016042: lipid catabolic process	2.43E-03
33	GO:0009567: double fertilization forming a zygote and endosperm	2.61E-03
34	GO:0030001: metal ion transport	4.51E-03
35	GO:0031347: regulation of defense response	5.60E-03
36	GO:0042538: hyperosmotic salinity response	5.74E-03
37	GO:0048367: shoot system development	6.91E-03
38	GO:0042744: hydrogen peroxide catabolic process	9.85E-03
39	GO:0007623: circadian rhythm	1.13E-02
40	GO:0007166: cell surface receptor signaling pathway	1.24E-02
41	GO:0009860: pollen tube growth	1.62E-02
42	GO:0080167: response to karrikin	1.79E-02
43	GO:0009737: response to abscisic acid	1.90E-02
44	GO:0032259: methylation	2.29E-02
45	GO:0008152: metabolic process	2.53E-02
46	GO:0016567: protein ubiquitination	2.72E-02
47	GO:0009734: auxin-activated signaling pathway	3.01E-02
48	GO:0009735: response to cytokinin	3.33E-02
49	GO:0009416: response to light stimulus	3.55E-02
50	GO:0009611: response to wounding	3.61E-02
51	GO:0006511: ubiquitin-dependent protein catabolic process	4.42E-02

Rank	GO Term	Adjusted P value
1	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
2	GO:0047513: 1,2-alpha-L-fucosidase activity	0.00E+00
3	GO:0005528: FK506 binding	2.99E-05
4	GO:0003839: gamma-glutamylcyclotransferase activity	4.85E-05
5	GO:0010011: auxin binding	1.78E-04
6	GO:0043495: protein anchor	1.78E-04
7	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	2.85E-04
8	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	2.85E-04
9	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.35E-04
10	GO:0004124: cysteine synthase activity	3.42E-04
11	GO:0003714: transcription corepressor activity	1.26E-03
12	GO:0016788: hydrolase activity, acting on ester bonds	1.41E-03
13	GO:0052689: carboxylic ester hydrolase activity	1.89E-03
14	GO:0010181: FMN binding	2.09E-03
15	GO:0016791: phosphatase activity	2.61E-03
16	GO:0004650: polygalacturonase activity	7.22E-03
17	GO:0016746: transferase activity, transferring acyl groups	7.85E-03
18	GO:0016829: lyase activity	9.51E-03
19	GO:0030170: pyridoxal phosphate binding	9.68E-03
20	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.07E-02
21	GO:0008017: microtubule binding	1.16E-02
22	GO:0016491: oxidoreductase activity	1.17E-02
23	GO:0042802: identical protein binding	1.34E-02
24	GO:0004601: peroxidase activity	1.54E-02
25	GO:0004871: signal transducer activity	2.10E-02
26	GO:0003924: GTPase activity	2.36E-02
27	GO:0005515: protein binding	3.00E-02
28	GO:0016740: transferase activity	4.09E-02
29	GO:0004674: protein serine/threonine kinase activity	4.39E-02

Rank	GO Term	Adjusted P value
1	GO:0043224: nuclear SCF ubiquitin ligase complex	0.00E+00
2	GO:0009930: longitudinal side of cell surface	0.00E+00
3	GO:0009897: external side of plasma membrane	8.61E-05
4	GO:0016328: lateral plasma membrane	8.61E-05
5	GO:0009509: chromoplast	8.61E-05
6	GO:0009505: plant-type cell wall	2.31E-04
7	GO:0008180: COP9 signalosome	5.93E-04
8	GO:0009534: chloroplast thylakoid	6.67E-04
9	GO:0009543: chloroplast thylakoid lumen	6.76E-04
10	GO:0055028: cortical microtubule	7.30E-04
11	GO:0031225: anchored component of membrane	9.14E-04
12	GO:0043234: protein complex	1.18E-03
13	GO:0019005: SCF ubiquitin ligase complex	3.51E-03
14	GO:0031977: thylakoid lumen	4.64E-03
15	GO:0000502: proteasome complex	6.02E-03
16	GO:0009706: chloroplast inner membrane	7.69E-03
17	GO:0005768: endosome	8.00E-03
18	GO:0009941: chloroplast envelope	8.87E-03
19	GO:0009536: plastid	1.09E-02
20	GO:0009570: chloroplast stroma	1.36E-02
21	GO:0046658: anchored component of plasma membrane	1.37E-02
22	GO:0005874: microtubule	1.75E-02
23	GO:0031969: chloroplast membrane	1.79E-02
24	GO:0005886: plasma membrane	3.13E-02
25	GO:0048046: apoplast	3.25E-02
26	GO:0009579: thylakoid	4.04E-02
27	GO:0009507: chloroplast	4.84E-02
28	GO:0005802: trans-Golgi network	4.97E-02