GO Enrichment Analysis of Co-expressed Genes with
AT1G56670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 2 | GO:0006223: uracil salvage | 0.00E+00 |
| 3 | GO:0035674: tricarboxylic acid transmembrane transport | 0.00E+00 |
| 4 | GO:0015805: S-adenosyl-L-methionine transport | 0.00E+00 |
| 5 | GO:0099131: ATP hydrolysis coupled ion transmembrane transport | 0.00E+00 |
| 6 | GO:0042371: vitamin K biosynthetic process | 0.00E+00 |
| 7 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 8 | GO:0042372: phylloquinone biosynthetic process | 1.44E-05 |
| 9 | GO:0006633: fatty acid biosynthetic process | 3.09E-05 |
| 10 | GO:0006835: dicarboxylic acid transport | 6.10E-05 |
| 11 | GO:0010143: cutin biosynthetic process | 1.14E-04 |
| 12 | GO:0006833: water transport | 1.46E-04 |
| 13 | GO:0010115: regulation of abscisic acid biosynthetic process | 1.48E-04 |
| 14 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.48E-04 |
| 15 | GO:0010024: phytochromobilin biosynthetic process | 1.48E-04 |
| 16 | GO:0006788: heme oxidation | 2.51E-04 |
| 17 | GO:0015840: urea transport | 2.51E-04 |
| 18 | GO:0042335: cuticle development | 3.11E-04 |
| 19 | GO:0046739: transport of virus in multicellular host | 3.65E-04 |
| 20 | GO:0055070: copper ion homeostasis | 3.65E-04 |
| 21 | GO:0034059: response to anoxia | 3.65E-04 |
| 22 | GO:0006412: translation | 4.29E-04 |
| 23 | GO:0006183: GTP biosynthetic process | 4.88E-04 |
| 24 | GO:0044206: UMP salvage | 4.88E-04 |
| 25 | GO:0048359: mucilage metabolic process involved in seed coat development | 6.19E-04 |
| 26 | GO:0043097: pyrimidine nucleoside salvage | 6.19E-04 |
| 27 | GO:0010236: plastoquinone biosynthetic process | 6.19E-04 |
| 28 | GO:0035434: copper ion transmembrane transport | 6.19E-04 |
| 29 | GO:0006206: pyrimidine nucleobase metabolic process | 7.57E-04 |
| 30 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.57E-04 |
| 31 | GO:0042254: ribosome biogenesis | 8.19E-04 |
| 32 | GO:0000462: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 9.01E-04 |
| 33 | GO:0030497: fatty acid elongation | 1.05E-03 |
| 34 | GO:0009610: response to symbiotic fungus | 1.05E-03 |
| 35 | GO:0009772: photosynthetic electron transport in photosystem II | 1.05E-03 |
| 36 | GO:0006839: mitochondrial transport | 1.08E-03 |
| 37 | GO:0006631: fatty acid metabolic process | 1.13E-03 |
| 38 | GO:0048564: photosystem I assembly | 1.21E-03 |
| 39 | GO:0010497: plasmodesmata-mediated intercellular transport | 1.38E-03 |
| 40 | GO:0032544: plastid translation | 1.38E-03 |
| 41 | GO:0015780: nucleotide-sugar transport | 1.55E-03 |
| 42 | GO:0009051: pentose-phosphate shunt, oxidative branch | 1.55E-03 |
| 43 | GO:0043069: negative regulation of programmed cell death | 1.92E-03 |
| 44 | GO:0045036: protein targeting to chloroplast | 1.92E-03 |
| 45 | GO:0000038: very long-chain fatty acid metabolic process | 2.12E-03 |
| 46 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.32E-03 |
| 47 | GO:0006790: sulfur compound metabolic process | 2.32E-03 |
| 48 | GO:0006006: glucose metabolic process | 2.52E-03 |
| 49 | GO:0009767: photosynthetic electron transport chain | 2.52E-03 |
| 50 | GO:0046854: phosphatidylinositol phosphorylation | 2.96E-03 |
| 51 | GO:0006810: transport | 3.06E-03 |
| 52 | GO:0010025: wax biosynthetic process | 3.18E-03 |
| 53 | GO:0000027: ribosomal large subunit assembly | 3.42E-03 |
| 54 | GO:0005992: trehalose biosynthetic process | 3.42E-03 |
| 55 | GO:0009116: nucleoside metabolic process | 3.42E-03 |
| 56 | GO:0045490: pectin catabolic process | 3.93E-03 |
| 57 | GO:0034220: ion transmembrane transport | 5.19E-03 |
| 58 | GO:0009658: chloroplast organization | 6.06E-03 |
| 59 | GO:0032502: developmental process | 6.61E-03 |
| 60 | GO:0016311: dephosphorylation | 9.47E-03 |
| 61 | GO:0009817: defense response to fungus, incompatible interaction | 9.82E-03 |
| 62 | GO:0006869: lipid transport | 9.88E-03 |
| 63 | GO:0030001: metal ion transport | 1.27E-02 |
| 64 | GO:0008643: carbohydrate transport | 1.47E-02 |
| 65 | GO:0042538: hyperosmotic salinity response | 1.63E-02 |
| 66 | GO:0006364: rRNA processing | 1.71E-02 |
| 67 | GO:0009735: response to cytokinin | 1.81E-02 |
| 68 | GO:0055085: transmembrane transport | 2.51E-02 |
| 69 | GO:0042744: hydrogen peroxide catabolic process | 2.83E-02 |
| 70 | GO:0009790: embryo development | 2.88E-02 |
| 71 | GO:0016036: cellular response to phosphate starvation | 3.09E-02 |
| 72 | GO:0006470: protein dephosphorylation | 3.57E-02 |
| 73 | GO:0009414: response to water deprivation | 3.90E-02 |
| 74 | GO:0009733: response to auxin | 4.48E-02 |
| 75 | GO:0006970: response to osmotic stress | 4.67E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 2 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 3 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 5 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 6 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0015142: tricarboxylic acid transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0019843: rRNA binding | 1.96E-05 |
| 9 | GO:0080132: fatty acid alpha-hydroxylase activity | 6.10E-05 |
| 10 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 6.10E-05 |
| 11 | GO:0015200: methylammonium transmembrane transporter activity | 6.10E-05 |
| 12 | GO:0019171: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity | 1.48E-04 |
| 13 | GO:0003938: IMP dehydrogenase activity | 1.48E-04 |
| 14 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 1.48E-04 |
| 15 | GO:0003735: structural constituent of ribosome | 2.32E-04 |
| 16 | GO:0030570: pectate lyase activity | 2.42E-04 |
| 17 | GO:0016531: copper chaperone activity | 2.51E-04 |
| 18 | GO:0070330: aromatase activity | 2.51E-04 |
| 19 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 2.51E-04 |
| 20 | GO:0019829: cation-transporting ATPase activity | 2.51E-04 |
| 21 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 2.51E-04 |
| 22 | GO:0043023: ribosomal large subunit binding | 3.65E-04 |
| 23 | GO:0017077: oxidative phosphorylation uncoupler activity | 3.65E-04 |
| 24 | GO:0052793: pectin acetylesterase activity | 4.88E-04 |
| 25 | GO:0004392: heme oxygenase (decyclizing) activity | 4.88E-04 |
| 26 | GO:0015204: urea transmembrane transporter activity | 4.88E-04 |
| 27 | GO:0004659: prenyltransferase activity | 4.88E-04 |
| 28 | GO:0004845: uracil phosphoribosyltransferase activity | 4.88E-04 |
| 29 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 4.88E-04 |
| 30 | GO:0016836: hydro-lyase activity | 4.88E-04 |
| 31 | GO:0015250: water channel activity | 5.92E-04 |
| 32 | GO:0009922: fatty acid elongase activity | 6.19E-04 |
| 33 | GO:0018685: alkane 1-monooxygenase activity | 6.19E-04 |
| 34 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 7.57E-04 |
| 35 | GO:0016208: AMP binding | 7.57E-04 |
| 36 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 7.57E-04 |
| 37 | GO:0008519: ammonium transmembrane transporter activity | 7.57E-04 |
| 38 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.01E-04 |
| 39 | GO:0004849: uridine kinase activity | 9.01E-04 |
| 40 | GO:0005375: copper ion transmembrane transporter activity | 1.38E-03 |
| 41 | GO:0004805: trehalose-phosphatase activity | 1.92E-03 |
| 42 | GO:0016746: transferase activity, transferring acyl groups | 2.36E-03 |
| 43 | GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism | 2.52E-03 |
| 44 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 3.18E-03 |
| 45 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 3.18E-03 |
| 46 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 3.18E-03 |
| 47 | GO:0005528: FK506 binding | 3.42E-03 |
| 48 | GO:0008514: organic anion transmembrane transporter activity | 4.65E-03 |
| 49 | GO:0016791: phosphatase activity | 7.21E-03 |
| 50 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 9.82E-03 |
| 51 | GO:0004722: protein serine/threonine phosphatase activity | 9.88E-03 |
| 52 | GO:0005096: GTPase activator activity | 1.02E-02 |
| 53 | GO:0046872: metal ion binding | 1.15E-02 |
| 54 | GO:0003993: acid phosphatase activity | 1.20E-02 |
| 55 | GO:0050661: NADP binding | 1.27E-02 |
| 56 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.55E-02 |
| 57 | GO:0008289: lipid binding | 1.55E-02 |
| 58 | GO:0003690: double-stranded DNA binding | 1.76E-02 |
| 59 | GO:0016787: hydrolase activity | 2.23E-02 |
| 60 | GO:0016829: lyase activity | 2.73E-02 |
| 61 | GO:0005507: copper ion binding | 2.82E-02 |
| 62 | GO:0005525: GTP binding | 3.25E-02 |
| 63 | GO:0042802: identical protein binding | 3.85E-02 |
| 64 | GO:0005506: iron ion binding | 3.93E-02 |
| 65 | GO:0008168: methyltransferase activity | 4.31E-02 |
| 66 | GO:0003824: catalytic activity | 4.38E-02 |
| 67 | GO:0004601: peroxidase activity | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 2.60E-10 |
| 2 | GO:0009570: chloroplast stroma | 5.22E-09 |
| 3 | GO:0009941: chloroplast envelope | 9.46E-09 |
| 4 | GO:0031969: chloroplast membrane | 8.50E-06 |
| 5 | GO:0009579: thylakoid | 1.10E-05 |
| 6 | GO:0009536: plastid | 7.52E-05 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 3.05E-04 |
| 8 | GO:0009505: plant-type cell wall | 4.92E-04 |
| 9 | GO:0016020: membrane | 6.82E-04 |
| 10 | GO:0042807: central vacuole | 1.05E-03 |
| 11 | GO:0031977: thylakoid lumen | 1.13E-03 |
| 12 | GO:0009535: chloroplast thylakoid membrane | 1.35E-03 |
| 13 | GO:0000326: protein storage vacuole | 1.38E-03 |
| 14 | GO:0005840: ribosome | 1.83E-03 |
| 15 | GO:0030095: chloroplast photosystem II | 2.74E-03 |
| 16 | GO:0000312: plastid small ribosomal subunit | 2.74E-03 |
| 17 | GO:0022626: cytosolic ribosome | 3.29E-03 |
| 18 | GO:0009654: photosystem II oxygen evolving complex | 3.65E-03 |
| 19 | GO:0019898: extrinsic component of membrane | 6.03E-03 |
| 20 | GO:0005778: peroxisomal membrane | 7.52E-03 |
| 21 | GO:0022625: cytosolic large ribosomal subunit | 7.91E-03 |
| 22 | GO:0009707: chloroplast outer membrane | 9.82E-03 |
| 23 | GO:0005743: mitochondrial inner membrane | 1.03E-02 |
| 24 | GO:0005887: integral component of plasma membrane | 1.51E-02 |
| 25 | GO:0005777: peroxisome | 2.27E-02 |
| 26 | GO:0016021: integral component of membrane | 2.41E-02 |
| 27 | GO:0005623: cell | 2.63E-02 |
| 28 | GO:0009506: plasmodesma | 2.94E-02 |
| 29 | GO:0031225: anchored component of membrane | 3.09E-02 |
| 30 | GO:0009705: plant-type vacuole membrane | 3.25E-02 |
| 31 | GO:0022627: cytosolic small ribosomal subunit | 3.97E-02 |
| 32 | GO:0046658: anchored component of plasma membrane | 3.97E-02 |
| 33 | GO:0005618: cell wall | 4.78E-02 |
| 34 | GO:0005886: plasma membrane | 4.88E-02 |