Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G56340

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0043462: regulation of ATPase activity0.00E+00
2GO:0006042: glucosamine biosynthetic process0.00E+00
3GO:1901137: carbohydrate derivative biosynthetic process0.00E+00
4GO:0044794: positive regulation by host of viral process0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0045792: negative regulation of cell size0.00E+00
7GO:0071731: response to nitric oxide0.00E+00
8GO:0006616: SRP-dependent cotranslational protein targeting to membrane, translocation0.00E+00
9GO:0006457: protein folding1.95E-16
10GO:0034976: response to endoplasmic reticulum stress8.47E-08
11GO:0046686: response to cadmium ion1.45E-06
12GO:0006465: signal peptide processing1.37E-05
13GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response2.96E-05
14GO:0006605: protein targeting5.25E-05
15GO:0030968: endoplasmic reticulum unfolded protein response6.66E-05
16GO:0009408: response to heat8.32E-05
17GO:0050691: regulation of defense response to virus by host9.50E-05
18GO:0002237: response to molecule of bacterial origin2.13E-04
19GO:0031204: posttranslational protein targeting to membrane, translocation2.24E-04
20GO:0045041: protein import into mitochondrial intermembrane space2.24E-04
21GO:0000027: ribosomal large subunit assembly3.00E-04
22GO:0006651: diacylglycerol biosynthetic process3.73E-04
23GO:0048281: inflorescence morphogenesis3.73E-04
24GO:0010581: regulation of starch biosynthetic process3.73E-04
25GO:0055074: calcium ion homeostasis3.73E-04
26GO:0006954: inflammatory response3.73E-04
27GO:1902626: assembly of large subunit precursor of preribosome3.73E-04
28GO:0009626: plant-type hypersensitive response4.18E-04
29GO:0045454: cell redox homeostasis4.44E-04
30GO:0009553: embryo sac development4.70E-04
31GO:0006986: response to unfolded protein5.37E-04
32GO:0051085: chaperone mediated protein folding requiring cofactor5.37E-04
33GO:0072334: UDP-galactose transmembrane transport5.37E-04
34GO:0009651: response to salt stress6.23E-04
35GO:0010188: response to microbial phytotoxin7.14E-04
36GO:0010193: response to ozone7.29E-04
37GO:0046283: anthocyanin-containing compound metabolic process9.02E-04
38GO:0042742: defense response to bacterium9.45E-04
39GO:0006979: response to oxidative stress9.59E-04
40GO:0042026: protein refolding1.31E-03
41GO:0006458: 'de novo' protein folding1.31E-03
42GO:0010204: defense response signaling pathway, resistance gene-independent2.03E-03
43GO:0010200: response to chitin2.27E-03
44GO:0006189: 'de novo' IMP biosynthetic process2.29E-03
45GO:0015780: nucleotide-sugar transport2.29E-03
46GO:0031347: regulation of defense response2.60E-03
47GO:0006886: intracellular protein transport2.84E-03
48GO:0051555: flavonol biosynthetic process2.85E-03
49GO:0009870: defense response signaling pathway, resistance gene-dependent2.85E-03
50GO:0006032: chitin catabolic process2.85E-03
51GO:0051603: proteolysis involved in cellular protein catabolic process2.99E-03
52GO:0072593: reactive oxygen species metabolic process3.14E-03
53GO:0010075: regulation of meristem growth3.76E-03
54GO:0009934: regulation of meristem structural organization4.08E-03
55GO:0048467: gynoecium development4.08E-03
56GO:0009863: salicylic acid mediated signaling pathway5.10E-03
57GO:0016998: cell wall macromolecule catabolic process5.83E-03
58GO:0061077: chaperone-mediated protein folding5.83E-03
59GO:0007005: mitochondrion organization6.20E-03
60GO:0030433: ubiquitin-dependent ERAD pathway6.20E-03
61GO:0009411: response to UV6.58E-03
62GO:0009306: protein secretion6.98E-03
63GO:0009555: pollen development7.37E-03
64GO:0034220: ion transmembrane transport7.79E-03
65GO:0000413: protein peptidyl-prolyl isomerization7.79E-03
66GO:0010118: stomatal movement7.79E-03
67GO:0010197: polar nucleus fusion8.21E-03
68GO:0048868: pollen tube development8.21E-03
69GO:0006662: glycerol ether metabolic process8.21E-03
70GO:0009617: response to bacterium8.42E-03
71GO:0016032: viral process9.96E-03
72GO:0009567: double fertilization forming a zygote and endosperm1.09E-02
73GO:0006511: ubiquitin-dependent protein catabolic process1.09E-02
74GO:0042254: ribosome biogenesis1.11E-02
75GO:0009615: response to virus1.23E-02
76GO:0009911: positive regulation of flower development1.23E-02
77GO:0001666: response to hypoxia1.23E-02
78GO:0009816: defense response to bacterium, incompatible interaction1.28E-02
79GO:0006906: vesicle fusion1.33E-02
80GO:0048573: photoperiodism, flowering1.38E-02
81GO:0006950: response to stress1.38E-02
82GO:0016192: vesicle-mediated transport1.43E-02
83GO:0016049: cell growth1.43E-02
84GO:0046777: protein autophosphorylation1.45E-02
85GO:0008219: cell death1.49E-02
86GO:0048527: lateral root development1.65E-02
87GO:0006099: tricarboxylic acid cycle1.81E-02
88GO:0034599: cellular response to oxidative stress1.81E-02
89GO:0006839: mitochondrial transport1.93E-02
90GO:0009751: response to salicylic acid1.98E-02
91GO:0006887: exocytosis1.99E-02
92GO:0042542: response to hydrogen peroxide2.05E-02
93GO:0051707: response to other organism2.10E-02
94GO:0050832: defense response to fungus2.17E-02
95GO:0008152: metabolic process2.22E-02
96GO:0009965: leaf morphogenesis2.29E-02
97GO:0006855: drug transmembrane transport2.35E-02
98GO:0015031: protein transport2.44E-02
99GO:0006364: rRNA processing2.60E-02
100GO:0006486: protein glycosylation2.60E-02
101GO:0009909: regulation of flower development2.80E-02
102GO:0009735: response to cytokinin3.26E-02
103GO:0009624: response to nematode3.34E-02
104GO:0018105: peptidyl-serine phosphorylation3.42E-02
105GO:0009611: response to wounding3.64E-02
106GO:0009845: seed germination4.15E-02
107GO:0010150: leaf senescence4.93E-02
RankGO TermAdjusted P value
1GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity0.00E+00
2GO:0008752: FMN reductase activity0.00E+00
3GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity0.00E+00
4GO:0052873: FMN reductase (NADPH) activity0.00E+00
5GO:0051082: unfolded protein binding5.27E-13
6GO:0005460: UDP-glucose transmembrane transporter activity4.33E-06
7GO:0003746: translation elongation factor activity6.31E-06
8GO:0004298: threonine-type endopeptidase activity1.20E-05
9GO:0005459: UDP-galactose transmembrane transporter activity1.37E-05
10GO:0003756: protein disulfide isomerase activity1.88E-05
11GO:0008233: peptidase activity3.37E-05
12GO:0004638: phosphoribosylaminoimidazole carboxylase activity9.50E-05
13GO:0097367: carbohydrate derivative binding9.50E-05
14GO:0080042: ADP-glucose pyrophosphohydrolase activity9.50E-05
15GO:0048037: cofactor binding9.50E-05
16GO:0031072: heat shock protein binding1.88E-04
17GO:0008517: folic acid transporter activity2.24E-04
18GO:0004776: succinate-CoA ligase (GDP-forming) activity2.24E-04
19GO:0080041: ADP-ribose pyrophosphohydrolase activity2.24E-04
20GO:0017110: nucleoside-diphosphatase activity2.24E-04
21GO:0004775: succinate-CoA ligase (ADP-forming) activity2.24E-04
22GO:0005524: ATP binding3.32E-04
23GO:0000030: mannosyltransferase activity3.73E-04
24GO:0003955: NAD(P)H dehydrogenase (quinone) activity3.73E-04
25GO:0005086: ARF guanyl-nucleotide exchange factor activity7.14E-04
26GO:0005509: calcium ion binding8.23E-04
27GO:0047631: ADP-ribose diphosphatase activity9.02E-04
28GO:0000210: NAD+ diphosphatase activity1.10E-03
29GO:0016887: ATPase activity1.18E-03
30GO:0008195: phosphatidate phosphatase activity1.31E-03
31GO:0008320: protein transmembrane transporter activity1.54E-03
32GO:0047893: flavonol 3-O-glucosyltransferase activity1.78E-03
33GO:0008135: translation factor activity, RNA binding2.03E-03
34GO:0004568: chitinase activity2.85E-03
35GO:0008559: xenobiotic-transporting ATPase activity3.14E-03
36GO:0044183: protein binding involved in protein folding3.14E-03
37GO:0080043: quercetin 3-O-glucosyltransferase activity3.74E-03
38GO:0080044: quercetin 7-O-glucosyltransferase activity3.74E-03
39GO:0015114: phosphate ion transmembrane transporter activity3.76E-03
40GO:0016758: transferase activity, transferring hexosyl groups4.99E-03
41GO:0051087: chaperone binding5.46E-03
42GO:0035251: UDP-glucosyltransferase activity5.83E-03
43GO:0047134: protein-disulfide reductase activity7.38E-03
44GO:0008194: UDP-glycosyltransferase activity7.90E-03
45GO:0004791: thioredoxin-disulfide reductase activity8.63E-03
46GO:0016853: isomerase activity8.63E-03
47GO:0010181: FMN binding8.63E-03
48GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.04E-02
49GO:0030246: carbohydrate binding1.07E-02
50GO:0008483: transaminase activity1.14E-02
51GO:0005507: copper ion binding1.15E-02
52GO:0015250: water channel activity1.23E-02
53GO:0009931: calcium-dependent protein serine/threonine kinase activity1.33E-02
54GO:0004683: calmodulin-dependent protein kinase activity1.38E-02
55GO:0005525: GTP binding1.39E-02
56GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity1.49E-02
57GO:0004222: metalloendopeptidase activity1.59E-02
58GO:0050897: cobalt ion binding1.65E-02
59GO:0000149: SNARE binding1.87E-02
60GO:0005484: SNAP receptor activity2.10E-02
61GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.35E-02
62GO:0051287: NAD binding2.41E-02
63GO:0016298: lipase activity2.67E-02
64GO:0031625: ubiquitin protein ligase binding2.80E-02
65GO:0015035: protein disulfide oxidoreductase activity3.42E-02
66GO:0019843: rRNA binding3.92E-02
67GO:0003735: structural constituent of ribosome4.25E-02
68GO:0008565: protein transporter activity4.46E-02
RankGO TermAdjusted P value
1GO:0031205: endoplasmic reticulum Sec complex0.00E+00
2GO:0005784: Sec61 translocon complex0.00E+00
3GO:0005783: endoplasmic reticulum1.76E-14
4GO:0005788: endoplasmic reticulum lumen7.97E-14
5GO:0005774: vacuolar membrane4.21E-10
6GO:0005773: vacuole6.22E-09
7GO:0005886: plasma membrane2.60E-08
8GO:0005618: cell wall7.98E-06
9GO:0005839: proteasome core complex1.20E-05
10GO:0000502: proteasome complex2.00E-05
11GO:0031090: organelle membrane8.24E-05
12GO:0005787: signal peptidase complex9.50E-05
13GO:0030134: ER to Golgi transport vesicle2.24E-04
14GO:0030176: integral component of endoplasmic reticulum membrane2.41E-04
15GO:0005747: mitochondrial respiratory chain complex I4.01E-04
16GO:0005789: endoplasmic reticulum membrane4.73E-04
17GO:0009507: chloroplast8.63E-04
18GO:0030173: integral component of Golgi membrane1.31E-03
19GO:0005801: cis-Golgi network1.31E-03
20GO:0009506: plasmodesma1.57E-03
21GO:0019773: proteasome core complex, alpha-subunit complex2.03E-03
22GO:0005739: mitochondrion2.52E-03
23GO:0005829: cytosol2.81E-03
24GO:0005740: mitochondrial envelope2.85E-03
25GO:0031012: extracellular matrix3.76E-03
26GO:0005623: cell5.26E-03
27GO:0005741: mitochondrial outer membrane5.83E-03
28GO:0009505: plant-type cell wall5.93E-03
29GO:0048046: apoplast9.00E-03
30GO:0005730: nucleolus9.34E-03
31GO:0016592: mediator complex9.96E-03
32GO:0022625: cytosolic large ribosomal subunit1.43E-02
33GO:0000151: ubiquitin ligase complex1.49E-02
34GO:0016021: integral component of membrane1.55E-02
35GO:0000325: plant-type vacuole1.65E-02
36GO:0005840: ribosome1.91E-02
37GO:0031201: SNARE complex1.99E-02
38GO:0043231: intracellular membrane-bounded organelle2.22E-02
39GO:0016020: membrane2.34E-02
40GO:0005759: mitochondrial matrix4.61E-02
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Gene type



Gene DE type