co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G55780

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0051238: sequestering of metal ion	0.00E+00
2	GO:0080169: cellular response to boron-containing substance deprivation	0.00E+00
3	GO:0010055: atrichoblast differentiation	0.00E+00
4	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
5	GO:0046865: terpenoid transport	0.00E+00
6	GO:0006874: cellular calcium ion homeostasis	5.39E-07
7	GO:0006536: glutamate metabolic process	1.75E-05
8	GO:0009620: response to fungus	1.04E-04
9	GO:0010200: response to chitin	1.41E-04
10	GO:0032491: detection of molecule of fungal origin	1.48E-04
11	GO:0032107: regulation of response to nutrient levels	1.48E-04
12	GO:0051938: L-glutamate import	1.48E-04
13	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	1.48E-04
14	GO:0010421: hydrogen peroxide-mediated programmed cell death	1.48E-04
15	GO:0043091: L-arginine import	3.38E-04
16	GO:0015802: basic amino acid transport	3.38E-04
17	GO:0009805: coumarin biosynthetic process	3.38E-04
18	GO:0009866: induced systemic resistance, ethylene mediated signaling pathway	3.38E-04
19	GO:0002240: response to molecule of oomycetes origin	3.38E-04
20	GO:0044419: interspecies interaction between organisms	3.38E-04
21	GO:0080168: abscisic acid transport	5.54E-04
22	GO:0009871: jasmonic acid and ethylene-dependent systemic resistance, ethylene mediated signaling pathway	5.54E-04
23	GO:0015692: lead ion transport	5.54E-04
24	GO:0006855: drug transmembrane transport	5.57E-04
25	GO:0070301: cellular response to hydrogen peroxide	7.93E-04
26	GO:1901002: positive regulation of response to salt stress	1.05E-03
27	GO:0045227: capsule polysaccharide biosynthetic process	1.05E-03
28	GO:0033358: UDP-L-arabinose biosynthetic process	1.05E-03
29	GO:0002229: defense response to oomycetes	1.29E-03
30	GO:0034052: positive regulation of plant-type hypersensitive response	1.33E-03
31	GO:0010252: auxin homeostasis	1.56E-03
32	GO:0002238: response to molecule of fungal origin	1.63E-03
33	GO:0006561: proline biosynthetic process	1.63E-03
34	GO:0015691: cadmium ion transport	1.63E-03
35	GO:0006555: methionine metabolic process	1.63E-03
36	GO:0051607: defense response to virus	1.75E-03
37	GO:0050832: defense response to fungus	1.83E-03
38	GO:0045926: negative regulation of growth	1.96E-03
39	GO:0006468: protein phosphorylation	1.96E-03
40	GO:0019509: L-methionine salvage from methylthioadenosine	1.96E-03
41	GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response	1.96E-03
42	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	2.30E-03
43	GO:1900056: negative regulation of leaf senescence	2.30E-03
44	GO:0050829: defense response to Gram-negative bacterium	2.30E-03
45	GO:0009817: defense response to fungus, incompatible interaction	2.40E-03
46	GO:0009407: toxin catabolic process	2.65E-03
47	GO:0010120: camalexin biosynthetic process	3.04E-03
48	GO:0010417: glucuronoxylan biosynthetic process	3.04E-03
49	GO:0010204: defense response signaling pathway, resistance gene-independent	3.04E-03
50	GO:0009699: phenylpropanoid biosynthetic process	3.04E-03
51	GO:0007186: G-protein coupled receptor signaling pathway	3.04E-03
52	GO:0010112: regulation of systemic acquired resistance	3.44E-03
53	GO:0009056: catabolic process	3.44E-03
54	GO:0009416: response to light stimulus	3.63E-03
55	GO:0009688: abscisic acid biosynthetic process	4.29E-03
56	GO:0010162: seed dormancy process	4.29E-03
57	GO:0009636: response to toxic substance	4.38E-03
58	GO:0009682: induced systemic resistance	4.73E-03
59	GO:0055046: microgametogenesis	5.68E-03
60	GO:0009718: anthocyanin-containing compound biosynthetic process	5.68E-03
61	GO:0002237: response to molecule of bacterial origin	6.17E-03
62	GO:0070588: calcium ion transmembrane transport	6.67E-03
63	GO:0009969: xyloglucan biosynthetic process	6.67E-03
64	GO:0009225: nucleotide-sugar metabolic process	6.67E-03
65	GO:0005992: trehalose biosynthetic process	7.74E-03
66	GO:0003333: amino acid transmembrane transport	8.85E-03
67	GO:0016998: cell wall macromolecule catabolic process	8.85E-03
68	GO:0071456: cellular response to hypoxia	9.43E-03
69	GO:0019748: secondary metabolic process	9.43E-03
70	GO:0071369: cellular response to ethylene stimulus	1.00E-02
71	GO:0010227: floral organ abscission	1.00E-02
72	GO:0006012: galactose metabolic process	1.00E-02
73	GO:0009561: megagametogenesis	1.06E-02
74	GO:0042744: hydrogen peroxide catabolic process	1.07E-02
75	GO:0006979: response to oxidative stress	1.07E-02
76	GO:0006885: regulation of pH	1.25E-02
77	GO:0071472: cellular response to salt stress	1.25E-02
78	GO:0010150: leaf senescence	1.29E-02
79	GO:0006623: protein targeting to vacuole	1.39E-02
80	GO:0010193: response to ozone	1.45E-02
81	GO:0007166: cell surface receptor signaling pathway	1.48E-02
82	GO:0009617: response to bacterium	1.55E-02
83	GO:0009615: response to virus	1.89E-02
84	GO:0009607: response to biotic stimulus	1.97E-02
85	GO:0009627: systemic acquired resistance	2.04E-02
86	GO:0008219: cell death	2.28E-02
87	GO:0009723: response to ethylene	2.32E-02
88	GO:0009832: plant-type cell wall biogenesis	2.36E-02
89	GO:0009834: plant-type secondary cell wall biogenesis	2.45E-02
90	GO:0048527: lateral root development	2.53E-02
91	GO:0046777: protein autophosphorylation	2.66E-02
92	GO:0045087: innate immune response	2.70E-02
93	GO:0055114: oxidation-reduction process	2.80E-02
94	GO:0006631: fatty acid metabolic process	3.05E-02
95	GO:0051707: response to other organism	3.23E-02
96	GO:0009751: response to salicylic acid	3.62E-02
97	GO:0006812: cation transport	3.80E-02
98	GO:0042538: hyperosmotic salinity response	3.80E-02
99	GO:0042742: defense response to bacterium	3.84E-02
100	GO:0009809: lignin biosynthetic process	4.00E-02
101	GO:0006486: protein glycosylation	4.00E-02
102	GO:0006813: potassium ion transport	4.00E-02
103	GO:0009626: plant-type hypersensitive response	4.71E-02

Rank	GO Term	Adjusted P value
1	GO:0004970: ionotropic glutamate receptor activity	2.56E-07
2	GO:0005217: intracellular ligand-gated ion channel activity	2.56E-07
3	GO:0004351: glutamate decarboxylase activity	9.39E-06
4	GO:0010279: indole-3-acetic acid amido synthetase activity	1.75E-05
5	GO:0031127: alpha-(1,2)-fucosyltransferase activity	1.48E-04
6	GO:0030145: manganese ion binding	2.92E-04
7	GO:0010297: heteropolysaccharide binding	3.38E-04
8	GO:0042409: caffeoyl-CoA O-methyltransferase activity	5.54E-04
9	GO:0010309: acireductone dioxygenase [iron(II)-requiring] activity	5.54E-04
10	GO:0015189: L-lysine transmembrane transporter activity	7.93E-04
11	GO:0015181: arginine transmembrane transporter activity	7.93E-04
12	GO:0045735: nutrient reservoir activity	8.23E-04
13	GO:0016301: kinase activity	9.47E-04
14	GO:0052689: carboxylic ester hydrolase activity	9.83E-04
15	GO:0009916: alternative oxidase activity	1.05E-03
16	GO:0050373: UDP-arabinose 4-epimerase activity	1.05E-03
17	GO:0005313: L-glutamate transmembrane transporter activity	1.05E-03
18	GO:0004930: G-protein coupled receptor activity	1.05E-03
19	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.33E-03
20	GO:0030246: carbohydrate binding	1.34E-03
21	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.87E-03
22	GO:0051920: peroxiredoxin activity	1.96E-03
23	GO:0102391: decanoate--CoA ligase activity	1.96E-03
24	GO:0003978: UDP-glucose 4-epimerase activity	1.96E-03
25	GO:0005524: ATP binding	2.08E-03
26	GO:0004467: long-chain fatty acid-CoA ligase activity	2.30E-03
27	GO:0008107: galactoside 2-alpha-L-fucosyltransferase activity	2.30E-03
28	GO:0015238: drug transmembrane transporter activity	2.52E-03
29	GO:0016209: antioxidant activity	2.66E-03
30	GO:0042626: ATPase activity, coupled to transmembrane movement of substances	2.77E-03
31	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.77E-03
32	GO:0008417: fucosyltransferase activity	3.44E-03
33	GO:0004601: peroxidase activity	3.56E-03
34	GO:0004364: glutathione transferase activity	3.75E-03
35	GO:0015174: basic amino acid transmembrane transporter activity	3.86E-03
36	GO:0008171: O-methyltransferase activity	4.29E-03
37	GO:0015020: glucuronosyltransferase activity	4.29E-03
38	GO:0008559: xenobiotic-transporting ATPase activity	4.73E-03
39	GO:0004674: protein serine/threonine kinase activity	5.50E-03
40	GO:0005388: calcium-transporting ATPase activity	5.68E-03
41	GO:0005516: calmodulin binding	6.74E-03
42	GO:0001046: core promoter sequence-specific DNA binding	7.74E-03
43	GO:0030170: pyridoxal phosphate binding	1.04E-02
44	GO:0005451: monovalent cation:proton antiporter activity	1.19E-02
45	GO:0015297: antiporter activity	1.23E-02
46	GO:0015299: solute:proton antiporter activity	1.32E-02
47	GO:0019901: protein kinase binding	1.39E-02
48	GO:0015385: sodium:proton antiporter activity	1.59E-02
49	GO:0051213: dioxygenase activity	1.89E-02
50	GO:0016740: transferase activity	2.04E-02
51	GO:0046872: metal ion binding	2.14E-02
52	GO:0050660: flavin adenine dinucleotide binding	2.32E-02
53	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.70E-02
54	GO:0044212: transcription regulatory region DNA binding	3.84E-02
55	GO:0009055: electron carrier activity	3.93E-02
56	GO:0016298: lipase activity	4.10E-02
57	GO:0015171: amino acid transmembrane transporter activity	4.30E-02
58	GO:0045330: aspartyl esterase activity	4.30E-02
59	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	4.61E-02
60	GO:0080043: quercetin 3-O-glucosyltransferase activity	4.81E-02
61	GO:0080044: quercetin 7-O-glucosyltransferase activity	4.81E-02
62	GO:0030599: pectinesterase activity	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0016021: integral component of membrane	1.10E-04
2	GO:0005886: plasma membrane	7.24E-04
3	GO:0005770: late endosome	1.05E-03
4	GO:0032580: Golgi cisterna membrane	1.56E-03
5	GO:0000325: plant-type vacuole	2.77E-03
6	GO:0005578: proteinaceous extracellular matrix	5.68E-03
7	GO:0031012: extracellular matrix	5.68E-03
8	GO:0070469: respiratory chain	8.29E-03
9	GO:0071944: cell periphery	1.59E-02
10	GO:0005576: extracellular region	1.87E-02
11	GO:0048046: apoplast	2.56E-02
12	GO:0005794: Golgi apparatus	3.64E-02
13	GO:0043231: intracellular membrane-bounded organelle	4.04E-02