Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G54740

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0080127: fruit septum development0.00E+00
2GO:0015822: ornithine transport0.00E+00
3GO:1901485: positive regulation of transcription factor catabolic process0.00E+00
4GO:0010411: xyloglucan metabolic process3.23E-05
5GO:0071370: cellular response to gibberellin stimulus5.79E-05
6GO:0000066: mitochondrial ornithine transport5.79E-05
7GO:0019354: siroheme biosynthetic process5.79E-05
8GO:0000038: very long-chain fatty acid metabolic process6.78E-05
9GO:0042546: cell wall biogenesis8.58E-05
10GO:0007154: cell communication1.41E-04
11GO:0033591: response to L-ascorbic acid2.40E-04
12GO:0071555: cell wall organization2.85E-04
13GO:0000271: polysaccharide biosynthetic process2.90E-04
14GO:0032456: endocytic recycling3.49E-04
15GO:2000762: regulation of phenylpropanoid metabolic process5.92E-04
16GO:0060918: auxin transport7.24E-04
17GO:1900425: negative regulation of defense response to bacterium7.24E-04
18GO:0003006: developmental process involved in reproduction7.24E-04
19GO:0051510: regulation of unidimensional cell growth1.01E-03
20GO:0052543: callose deposition in cell wall1.16E-03
21GO:0048193: Golgi vesicle transport1.32E-03
22GO:0000902: cell morphogenesis1.48E-03
23GO:0048507: meristem development1.48E-03
24GO:0009638: phototropism1.65E-03
25GO:0006779: porphyrin-containing compound biosynthetic process1.65E-03
26GO:0043069: negative regulation of programmed cell death1.83E-03
27GO:0016024: CDP-diacylglycerol biosynthetic process2.21E-03
28GO:0010582: floral meristem determinacy2.21E-03
29GO:0009742: brassinosteroid mediated signaling pathway2.27E-03
30GO:0018107: peptidyl-threonine phosphorylation2.41E-03
31GO:0048467: gynoecium development2.62E-03
32GO:0010143: cutin biosynthetic process2.62E-03
33GO:0009969: xyloglucan biosynthetic process2.82E-03
34GO:0005985: sucrose metabolic process2.82E-03
35GO:0006833: water transport3.04E-03
36GO:0009738: abscisic acid-activated signaling pathway3.06E-03
37GO:0006468: protein phosphorylation3.08E-03
38GO:0009416: response to light stimulus3.19E-03
39GO:0005992: trehalose biosynthetic process3.26E-03
40GO:0006633: fatty acid biosynthetic process3.35E-03
41GO:0010017: red or far-red light signaling pathway3.95E-03
42GO:0019722: calcium-mediated signaling4.44E-03
43GO:0080022: primary root development4.95E-03
44GO:0034220: ion transmembrane transport4.95E-03
45GO:0010087: phloem or xylem histogenesis4.95E-03
46GO:0000226: microtubule cytoskeleton organization4.95E-03
47GO:0042335: cuticle development4.95E-03
48GO:0009958: positive gravitropism5.21E-03
49GO:0009741: response to brassinosteroid5.21E-03
50GO:0045489: pectin biosynthetic process5.21E-03
51GO:0010305: leaf vascular tissue pattern formation5.21E-03
52GO:0009791: post-embryonic development5.75E-03
53GO:0007264: small GTPase mediated signal transduction6.31E-03
54GO:0080167: response to karrikin7.02E-03
55GO:0007267: cell-cell signaling7.18E-03
56GO:0046777: protein autophosphorylation7.50E-03
57GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.08E-03
58GO:0016311: dephosphorylation9.03E-03
59GO:0048767: root hair elongation9.69E-03
60GO:0010218: response to far red light1.00E-02
61GO:0010119: regulation of stomatal movement1.04E-02
62GO:0016051: carbohydrate biosynthetic process1.11E-02
63GO:0006839: mitochondrial transport1.21E-02
64GO:0010114: response to red light1.32E-02
65GO:0009734: auxin-activated signaling pathway1.46E-02
66GO:0006486: protein glycosylation1.63E-02
67GO:0009585: red, far-red light phototransduction1.63E-02
68GO:0051603: proteolysis involved in cellular protein catabolic process1.67E-02
69GO:0035556: intracellular signal transduction1.95E-02
70GO:0018105: peptidyl-serine phosphorylation2.14E-02
71GO:0009845: seed germination2.60E-02
72GO:0040008: regulation of growth2.99E-02
73GO:0009617: response to bacterium3.51E-02
74GO:0009826: unidimensional cell growth4.11E-02
75GO:0009733: response to auxin4.19E-02
76GO:0006970: response to osmotic stress4.45E-02
77GO:0009860: pollen tube growth4.45E-02
RankGO TermAdjusted P value
1GO:0004851: uroporphyrin-III C-methyltransferase activity0.00E+00
2GO:0080132: fatty acid alpha-hydroxylase activity5.79E-05
3GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.23E-04
4GO:0000064: L-ornithine transmembrane transporter activity1.41E-04
5GO:0001872: (1->3)-beta-D-glucan binding3.49E-04
6GO:0033843: xyloglucan 6-xylosyltransferase activity3.49E-04
7GO:0016762: xyloglucan:xyloglucosyl transferase activity3.87E-04
8GO:0016798: hydrolase activity, acting on glycosyl bonds6.49E-04
9GO:0030247: polysaccharide binding6.49E-04
10GO:0035252: UDP-xylosyltransferase activity7.24E-04
11GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity7.24E-04
12GO:0004366: glycerol-3-phosphate O-acyltransferase activity7.24E-04
13GO:0019900: kinase binding8.63E-04
14GO:0004564: beta-fructofuranosidase activity1.16E-03
15GO:0004674: protein serine/threonine kinase activity1.26E-03
16GO:0004575: sucrose alpha-glucosidase activity1.65E-03
17GO:0004805: trehalose-phosphatase activity1.83E-03
18GO:0016758: transferase activity, transferring hexosyl groups2.61E-03
19GO:0042973: glucan endo-1,3-beta-D-glucosidase activity2.62E-03
20GO:0102337: 3-oxo-cerotoyl-CoA synthase activity3.04E-03
21GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity3.04E-03
22GO:0102336: 3-oxo-arachidoyl-CoA synthase activity3.04E-03
23GO:0008134: transcription factor binding3.26E-03
24GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity3.95E-03
25GO:0016301: kinase activity4.76E-03
26GO:0016759: cellulose synthase activity6.88E-03
27GO:0016791: phosphatase activity6.88E-03
28GO:0016722: oxidoreductase activity, oxidizing metal ions7.18E-03
29GO:0015250: water channel activity7.78E-03
30GO:0003924: GTPase activity1.04E-02
31GO:0004672: protein kinase activity1.27E-02
32GO:0004185: serine-type carboxypeptidase activity1.32E-02
33GO:0043621: protein self-association1.40E-02
34GO:0016298: lipase activity1.67E-02
35GO:0016746: transferase activity, transferring acyl groups2.14E-02
36GO:0005507: copper ion binding2.63E-02
37GO:0005525: GTP binding3.04E-02
38GO:0016757: transferase activity, transferring glycosyl groups3.64E-02
39GO:0008168: methyltransferase activity4.11E-02
40GO:0046982: protein heterodimerization activity4.17E-02
RankGO TermAdjusted P value
1GO:0009505: plant-type cell wall5.14E-07
2GO:0031225: anchored component of membrane1.38E-06
3GO:0046658: anchored component of plasma membrane2.78E-06
4GO:0005886: plasma membrane6.62E-05
5GO:0005775: vacuolar lumen3.49E-04
6GO:0035619: root hair tip3.49E-04
7GO:0032588: trans-Golgi network membrane7.24E-04
8GO:0031901: early endosome membrane1.48E-03
9GO:0000139: Golgi membrane2.43E-03
10GO:0005576: extracellular region2.48E-03
11GO:0009506: plasmodesma2.84E-03
12GO:0005773: vacuole5.43E-03
13GO:0016021: integral component of membrane9.53E-03
14GO:0000325: plant-type vacuole1.04E-02
15GO:0000786: nucleosome1.07E-02
16GO:0048046: apoplast1.09E-02
17GO:0005618: cell wall1.24E-02
18GO:0031902: late endosome membrane1.25E-02
19GO:0005789: endoplasmic reticulum membrane1.34E-02
20GO:0005794: Golgi apparatus1.58E-02
21GO:0005615: extracellular space3.35E-02
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Gene type



Gene DE type