co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G53760

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0015690: aluminum cation transport	0.00E+00
2	GO:0009992: cellular water homeostasis	0.00E+00
3	GO:0051553: flavone biosynthetic process	0.00E+00
4	GO:0009627: systemic acquired resistance	5.21E-08
5	GO:0080185: effector dependent induction by symbiont of host immune response	4.79E-07
6	GO:0006468: protein phosphorylation	3.53E-06
7	GO:0009617: response to bacterium	1.14E-05
8	GO:0042742: defense response to bacterium	2.76E-05
9	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	5.25E-05
10	GO:0030162: regulation of proteolysis	5.25E-05
11	GO:0009816: defense response to bacterium, incompatible interaction	7.50E-05
12	GO:0010112: regulation of systemic acquired resistance	8.24E-05
13	GO:0006888: ER to Golgi vesicle-mediated transport	8.81E-05
14	GO:0009700: indole phytoalexin biosynthetic process	9.50E-05
15	GO:0043985: histone H4-R3 methylation	9.50E-05
16	GO:0006643: membrane lipid metabolic process	9.50E-05
17	GO:0055081: anion homeostasis	9.50E-05
18	GO:0010266: response to vitamin B1	9.50E-05
19	GO:0009817: defense response to fungus, incompatible interaction	1.03E-04
20	GO:0006952: defense response	1.48E-04
21	GO:0031349: positive regulation of defense response	2.24E-04
22	GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine	2.24E-04
23	GO:0010618: aerenchyma formation	2.24E-04
24	GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process	2.69E-04
25	GO:0010498: proteasomal protein catabolic process	3.73E-04
26	GO:1900140: regulation of seedling development	3.73E-04
27	GO:2000022: regulation of jasmonic acid mediated signaling pathway	4.00E-04
28	GO:0009620: response to fungus	4.35E-04
29	GO:0072334: UDP-galactose transmembrane transport	5.37E-04
30	GO:0048530: fruit morphogenesis	5.37E-04
31	GO:0000187: activation of MAPK activity	5.37E-04
32	GO:0048194: Golgi vesicle budding	5.37E-04
33	GO:0009311: oligosaccharide metabolic process	5.37E-04
34	GO:0002239: response to oomycetes	5.37E-04
35	GO:1901141: regulation of lignin biosynthetic process	7.14E-04
36	GO:0060548: negative regulation of cell death	7.14E-04
37	GO:0030163: protein catabolic process	8.26E-04
38	GO:0000304: response to singlet oxygen	9.02E-04
39	GO:0031365: N-terminal protein amino acid modification	9.02E-04
40	GO:0006904: vesicle docking involved in exocytosis	9.27E-04
41	GO:0060918: auxin transport	1.10E-03
42	GO:0010942: positive regulation of cell death	1.10E-03
43	GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process	1.11E-03
44	GO:0007166: cell surface receptor signaling pathway	1.14E-03
45	GO:0000911: cytokinesis by cell plate formation	1.31E-03
46	GO:0009612: response to mechanical stimulus	1.31E-03
47	GO:0010199: organ boundary specification between lateral organs and the meristem	1.31E-03
48	GO:0010310: regulation of hydrogen peroxide metabolic process	1.31E-03
49	GO:0008219: cell death	1.33E-03
50	GO:0009813: flavonoid biosynthetic process	1.40E-03
51	GO:0006499: N-terminal protein myristoylation	1.47E-03
52	GO:0010044: response to aluminum ion	1.54E-03
53	GO:0046470: phosphatidylcholine metabolic process	1.54E-03
54	GO:0050832: defense response to fungus	1.76E-03
55	GO:0009787: regulation of abscisic acid-activated signaling pathway	1.78E-03
56	GO:0006508: proteolysis	1.88E-03
57	GO:0010120: camalexin biosynthetic process	2.03E-03
58	GO:2000031: regulation of salicylic acid mediated signaling pathway	2.03E-03
59	GO:0009932: cell tip growth	2.03E-03
60	GO:0006002: fructose 6-phosphate metabolic process	2.03E-03
61	GO:0015780: nucleotide-sugar transport	2.29E-03
62	GO:0048268: clathrin coat assembly	2.56E-03
63	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	2.56E-03
64	GO:0043069: negative regulation of programmed cell death	2.85E-03
65	GO:0030036: actin cytoskeleton organization	3.76E-03
66	GO:0055046: microgametogenesis	3.76E-03
67	GO:0010030: positive regulation of seed germination	4.41E-03
68	GO:0070588: calcium ion transmembrane transport	4.41E-03
69	GO:0010053: root epidermal cell differentiation	4.41E-03
70	GO:0009969: xyloglucan biosynthetic process	4.41E-03
71	GO:0009863: salicylic acid mediated signaling pathway	5.10E-03
72	GO:0080147: root hair cell development	5.10E-03
73	GO:0009814: defense response, incompatible interaction	6.20E-03
74	GO:0031348: negative regulation of defense response	6.20E-03
75	GO:0009625: response to insect	6.58E-03
76	GO:0010584: pollen exine formation	6.98E-03
77	GO:0009561: megagametogenesis	6.98E-03
78	GO:0009306: protein secretion	6.98E-03
79	GO:0010150: leaf senescence	7.06E-03
80	GO:0070417: cellular response to cold	7.38E-03
81	GO:0010051: xylem and phloem pattern formation	7.79E-03
82	GO:0010197: polar nucleus fusion	8.21E-03
83	GO:0061025: membrane fusion	8.63E-03
84	GO:0009646: response to absence of light	8.63E-03
85	GO:0010183: pollen tube guidance	9.06E-03
86	GO:0002229: defense response to oomycetes	9.51E-03
87	GO:0000910: cytokinesis	1.18E-02
88	GO:0001666: response to hypoxia	1.23E-02
89	GO:0007165: signal transduction	1.28E-02
90	GO:0009607: response to biotic stimulus	1.28E-02
91	GO:0010200: response to chitin	1.40E-02
92	GO:0009832: plant-type cell wall biogenesis	1.54E-02
93	GO:0009631: cold acclimation	1.65E-02
94	GO:0010119: regulation of stomatal movement	1.65E-02
95	GO:0009414: response to water deprivation	1.75E-02
96	GO:0006099: tricarboxylic acid cycle	1.81E-02
97	GO:0006979: response to oxidative stress	1.82E-02
98	GO:0009751: response to salicylic acid	1.98E-02
99	GO:0006887: exocytosis	1.99E-02
100	GO:0006897: endocytosis	1.99E-02
101	GO:0051707: response to other organism	2.10E-02
102	GO:0000209: protein polyubiquitination	2.16E-02
103	GO:0008643: carbohydrate transport	2.23E-02
104	GO:0000165: MAPK cascade	2.41E-02
105	GO:0009846: pollen germination	2.47E-02
106	GO:0006096: glycolytic process	2.93E-02
107	GO:0009626: plant-type hypersensitive response	3.07E-02
108	GO:0051726: regulation of cell cycle	3.49E-02
109	GO:0009742: brassinosteroid mediated signaling pathway	3.49E-02
110	GO:0055085: transmembrane transport	4.51E-02
111	GO:0009737: response to abscisic acid	4.62E-02

Rank	GO Term	Adjusted P value
1	GO:0010298: dihydrocamalexic acid decarboxylase activity	0.00E+00
2	GO:0033746: histone demethylase activity (H3-R2 specific)	0.00E+00
3	GO:0033749: histone demethylase activity (H4-R3 specific)	0.00E+00
4	GO:0033759: flavone synthase activity	0.00E+00
5	GO:1901149: salicylic acid binding	0.00E+00
6	GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism	3.85E-06
7	GO:0004012: phospholipid-translocating ATPase activity	2.96E-05
8	GO:0004656: procollagen-proline 4-dioxygenase activity	2.96E-05
9	GO:0005524: ATP binding	4.11E-05
10	GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity	9.50E-05
11	GO:0004674: protein serine/threonine kinase activity	1.02E-04
12	GO:0016301: kinase activity	1.09E-04
13	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	1.45E-04
14	GO:0004190: aspartic-type endopeptidase activity	2.41E-04
15	GO:0031418: L-ascorbic acid binding	3.00E-04
16	GO:0005516: calmodulin binding	5.63E-04
17	GO:0004576: oligosaccharyl transferase activity	7.14E-04
18	GO:0005459: UDP-galactose transmembrane transporter activity	9.02E-04
19	GO:0005546: phosphatidylinositol-4,5-bisphosphate binding	9.02E-04
20	GO:0045431: flavonol synthase activity	9.02E-04
21	GO:0030247: polysaccharide binding	1.21E-03
22	GO:0004723: calcium-dependent protein serine/threonine phosphatase activity	1.31E-03
23	GO:0003872: 6-phosphofructokinase activity	1.54E-03
24	GO:0005338: nucleotide-sugar transmembrane transporter activity	1.54E-03
25	GO:0008235: metalloexopeptidase activity	1.54E-03
26	GO:0000287: magnesium ion binding	1.62E-03
27	GO:0004708: MAP kinase kinase activity	1.78E-03
28	GO:0004714: transmembrane receptor protein tyrosine kinase activity	1.78E-03
29	GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity	2.03E-03
30	GO:0004630: phospholipase D activity	2.03E-03
31	GO:0005515: protein binding	2.33E-03
32	GO:0005545: 1-phosphatidylinositol binding	2.85E-03
33	GO:0004177: aminopeptidase activity	3.14E-03
34	GO:0031625: ubiquitin protein ligase binding	3.20E-03
35	GO:0005388: calcium-transporting ATPase activity	3.76E-03
36	GO:0015095: magnesium ion transmembrane transporter activity	3.76E-03
37	GO:0005506: iron ion binding	4.11E-03
38	GO:0016746: transferase activity, transferring acyl groups	4.22E-03
39	GO:0033612: receptor serine/threonine kinase binding	5.83E-03
40	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	6.58E-03
41	GO:0008810: cellulase activity	6.58E-03
42	GO:0004672: protein kinase activity	7.53E-03
43	GO:0030276: clathrin binding	8.21E-03
44	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	1.14E-02
45	GO:0004806: triglyceride lipase activity	1.38E-02
46	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	1.43E-02
47	GO:0005509: calcium ion binding	1.63E-02
48	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	1.76E-02
49	GO:0004722: protein serine/threonine phosphatase activity	1.79E-02
50	GO:0000987: core promoter proximal region sequence-specific DNA binding	1.81E-02
51	GO:0008422: beta-glucosidase activity	1.87E-02
52	GO:0046872: metal ion binding	2.02E-02
53	GO:0005484: SNAP receptor activity	2.10E-02
54	GO:0005198: structural molecule activity	2.29E-02
55	GO:0016298: lipase activity	2.67E-02
56	GO:0022857: transmembrane transporter activity	3.20E-02
57	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	4.00E-02
58	GO:0008565: protein transporter activity	4.46E-02
59	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	4.68E-02
60	GO:0015297: antiporter activity	4.77E-02

Rank	GO Term	Adjusted P value
1	GO:0005886: plasma membrane	1.25E-09
2	GO:0016021: integral component of membrane	2.72E-06
3	GO:0045252: oxoglutarate dehydrogenase complex	9.50E-05
4	GO:0030126: COPI vesicle coat	9.02E-04
5	GO:0005945: 6-phosphofructokinase complex	9.02E-04
6	GO:0019005: SCF ubiquitin ligase complex	1.33E-03
7	GO:0031225: anchored component of membrane	2.83E-03
8	GO:0005769: early endosome	4.75E-03
9	GO:0005905: clathrin-coated pit	5.83E-03
10	GO:0000139: Golgi membrane	6.66E-03
11	GO:0030136: clathrin-coated vesicle	7.38E-03
12	GO:0005789: endoplasmic reticulum membrane	8.00E-03
13	GO:0009504: cell plate	9.06E-03
14	GO:0019898: extrinsic component of membrane	9.06E-03
15	GO:0046658: anchored component of plasma membrane	9.35E-03
16	GO:0000145: exocyst	9.96E-03
17	GO:0016020: membrane	1.07E-02
18	GO:0005802: trans-Golgi network	1.34E-02
19	GO:0090406: pollen tube	2.10E-02
20	GO:0005856: cytoskeleton	2.29E-02
21	GO:0005794: Golgi apparatus	2.30E-02
22	GO:0005774: vacuolar membrane	2.73E-02
23	GO:0005783: endoplasmic reticulum	2.75E-02
24	GO:0048046: apoplast	2.93E-02
25	GO:0005623: cell	4.00E-02
26	GO:0009524: phragmoplast	4.07E-02
27	GO:0009705: plant-type vacuole membrane	4.93E-02