GO Enrichment Analysis of Co-expressed Genes with
AT1G52930
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042430: indole-containing compound metabolic process | 0.00E+00 |
| 2 | GO:0072321: chaperone-mediated protein transport | 0.00E+00 |
| 3 | GO:0071433: cell wall repair | 0.00E+00 |
| 4 | GO:0000494: box C/D snoRNA 3'-end processing | 0.00E+00 |
| 5 | GO:0071731: response to nitric oxide | 0.00E+00 |
| 6 | GO:0090069: regulation of ribosome biogenesis | 0.00E+00 |
| 7 | GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 8 | GO:0000466: maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 0.00E+00 |
| 9 | GO:1990258: histone glutamine methylation | 0.00E+00 |
| 10 | GO:0006457: protein folding | 2.16E-12 |
| 11 | GO:0034976: response to endoplasmic reticulum stress | 2.10E-09 |
| 12 | GO:0046686: response to cadmium ion | 8.35E-07 |
| 13 | GO:0009651: response to salt stress | 2.16E-05 |
| 14 | GO:0031167: rRNA methylation | 2.24E-05 |
| 15 | GO:0006364: rRNA processing | 4.37E-05 |
| 16 | GO:0008033: tRNA processing | 4.58E-05 |
| 17 | GO:0010197: polar nucleus fusion | 5.15E-05 |
| 18 | GO:0042254: ribosome biogenesis | 5.57E-05 |
| 19 | GO:0009553: embryo sac development | 8.06E-05 |
| 20 | GO:0001510: RNA methylation | 1.04E-04 |
| 21 | GO:0045454: cell redox homeostasis | 1.25E-04 |
| 22 | GO:0006430: lysyl-tRNA aminoacylation | 1.27E-04 |
| 23 | GO:2000232: regulation of rRNA processing | 1.27E-04 |
| 24 | GO:0010162: seed dormancy process | 1.83E-04 |
| 25 | GO:0006626: protein targeting to mitochondrion | 2.83E-04 |
| 26 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 2.94E-04 |
| 27 | GO:0019919: peptidyl-arginine methylation, to asymmetrical-dimethyl arginine | 2.94E-04 |
| 28 | GO:0045041: protein import into mitochondrial intermembrane space | 2.94E-04 |
| 29 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.45E-04 |
| 30 | GO:0006954: inflammatory response | 4.86E-04 |
| 31 | GO:1902626: assembly of large subunit precursor of preribosome | 4.86E-04 |
| 32 | GO:0045039: protein import into mitochondrial inner membrane | 4.86E-04 |
| 33 | GO:0055074: calcium ion homeostasis | 4.86E-04 |
| 34 | GO:0007005: mitochondrion organization | 5.89E-04 |
| 35 | GO:0009294: DNA mediated transformation | 6.40E-04 |
| 36 | GO:0072334: UDP-galactose transmembrane transport | 6.95E-04 |
| 37 | GO:0007276: gamete generation | 6.95E-04 |
| 38 | GO:0042823: pyridoxal phosphate biosynthetic process | 6.95E-04 |
| 39 | GO:0009855: determination of bilateral symmetry | 6.95E-04 |
| 40 | GO:0000460: maturation of 5.8S rRNA | 9.21E-04 |
| 41 | GO:0010188: response to microbial phytotoxin | 9.21E-04 |
| 42 | GO:0042273: ribosomal large subunit biogenesis | 9.21E-04 |
| 43 | GO:0000956: nuclear-transcribed mRNA catabolic process | 9.21E-04 |
| 44 | GO:0031365: N-terminal protein amino acid modification | 1.16E-03 |
| 45 | GO:0009567: double fertilization forming a zygote and endosperm | 1.28E-03 |
| 46 | GO:0006412: translation | 1.29E-03 |
| 47 | GO:0000470: maturation of LSU-rRNA | 1.43E-03 |
| 48 | GO:0000741: karyogamy | 1.43E-03 |
| 49 | GO:0006458: 'de novo' protein folding | 1.71E-03 |
| 50 | GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response | 1.71E-03 |
| 51 | GO:0042026: protein refolding | 1.71E-03 |
| 52 | GO:0009423: chorismate biosynthetic process | 1.71E-03 |
| 53 | GO:0080186: developmental vegetative growth | 2.01E-03 |
| 54 | GO:0042255: ribosome assembly | 2.32E-03 |
| 55 | GO:0009793: embryo development ending in seed dormancy | 2.40E-03 |
| 56 | GO:0030968: endoplasmic reticulum unfolded protein response | 2.65E-03 |
| 57 | GO:0015031: protein transport | 2.91E-03 |
| 58 | GO:0006379: mRNA cleavage | 3.00E-03 |
| 59 | GO:0006189: 'de novo' IMP biosynthetic process | 3.00E-03 |
| 60 | GO:0007338: single fertilization | 3.00E-03 |
| 61 | GO:0016573: histone acetylation | 3.36E-03 |
| 62 | GO:0010205: photoinhibition | 3.36E-03 |
| 63 | GO:0043067: regulation of programmed cell death | 3.36E-03 |
| 64 | GO:0009073: aromatic amino acid family biosynthetic process | 4.12E-03 |
| 65 | GO:0016485: protein processing | 4.12E-03 |
| 66 | GO:0071365: cellular response to auxin stimulus | 4.52E-03 |
| 67 | GO:0010075: regulation of meristem growth | 4.93E-03 |
| 68 | GO:0009934: regulation of meristem structural organization | 5.36E-03 |
| 69 | GO:0048467: gynoecium development | 5.36E-03 |
| 70 | GO:0046688: response to copper ion | 5.80E-03 |
| 71 | GO:0080188: RNA-directed DNA methylation | 5.80E-03 |
| 72 | GO:0000027: ribosomal large subunit assembly | 6.71E-03 |
| 73 | GO:0030150: protein import into mitochondrial matrix | 6.71E-03 |
| 74 | GO:0006825: copper ion transport | 7.19E-03 |
| 75 | GO:0051302: regulation of cell division | 7.19E-03 |
| 76 | GO:0015992: proton transport | 7.68E-03 |
| 77 | GO:0006334: nucleosome assembly | 7.68E-03 |
| 78 | GO:0061077: chaperone-mediated protein folding | 7.68E-03 |
| 79 | GO:0030433: ubiquitin-dependent ERAD pathway | 8.18E-03 |
| 80 | GO:0009306: protein secretion | 9.21E-03 |
| 81 | GO:0006413: translational initiation | 9.81E-03 |
| 82 | GO:0000413: protein peptidyl-prolyl isomerization | 1.03E-02 |
| 83 | GO:0006662: glycerol ether metabolic process | 1.09E-02 |
| 84 | GO:0048868: pollen tube development | 1.09E-02 |
| 85 | GO:0009735: response to cytokinin | 1.09E-02 |
| 86 | GO:0009960: endosperm development | 1.09E-02 |
| 87 | GO:0009555: pollen development | 1.23E-02 |
| 88 | GO:0006635: fatty acid beta-oxidation | 1.26E-02 |
| 89 | GO:0016049: cell growth | 1.90E-02 |
| 90 | GO:0048527: lateral root development | 2.19E-02 |
| 91 | GO:0010043: response to zinc ion | 2.19E-02 |
| 92 | GO:0045087: innate immune response | 2.33E-02 |
| 93 | GO:0034599: cellular response to oxidative stress | 2.41E-02 |
| 94 | GO:0006839: mitochondrial transport | 2.56E-02 |
| 95 | GO:0009644: response to high light intensity | 2.96E-02 |
| 96 | GO:0009408: response to heat | 2.99E-02 |
| 97 | GO:0006979: response to oxidative stress | 3.01E-02 |
| 98 | GO:0000154: rRNA modification | 3.04E-02 |
| 99 | GO:0048364: root development | 3.12E-02 |
| 100 | GO:0051603: proteolysis involved in cellular protein catabolic process | 3.54E-02 |
| 101 | GO:0009909: regulation of flower development | 3.72E-02 |
| 102 | GO:0048316: seed development | 3.98E-02 |
| 103 | GO:0016569: covalent chromatin modification | 4.26E-02 |
| 104 | GO:0006396: RNA processing | 4.53E-02 |
| 105 | GO:0000398: mRNA splicing, via spliceosome | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1990259: histone-glutamine methyltransferase activity | 0.00E+00 |
| 2 | GO:0004107: chorismate synthase activity | 0.00E+00 |
| 3 | GO:0051082: unfolded protein binding | 1.53E-10 |
| 4 | GO:0030515: snoRNA binding | 2.86E-09 |
| 5 | GO:0003756: protein disulfide isomerase activity | 7.88E-07 |
| 6 | GO:0043021: ribonucleoprotein complex binding | 8.20E-07 |
| 7 | GO:0008649: rRNA methyltransferase activity | 3.08E-06 |
| 8 | GO:0003723: RNA binding | 1.12E-04 |
| 9 | GO:0042134: rRNA primary transcript binding | 1.27E-04 |
| 10 | GO:0004638: phosphoribosylaminoimidazole carboxylase activity | 1.27E-04 |
| 11 | GO:0004824: lysine-tRNA ligase activity | 1.27E-04 |
| 12 | GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity | 1.27E-04 |
| 13 | GO:0003746: translation elongation factor activity | 2.51E-04 |
| 14 | GO:0016277: [myelin basic protein]-arginine N-methyltransferase activity | 2.94E-04 |
| 15 | GO:0035242: protein-arginine omega-N asymmetric methyltransferase activity | 2.94E-04 |
| 16 | GO:0035241: protein-arginine omega-N monomethyltransferase activity | 2.94E-04 |
| 17 | GO:0004407: histone deacetylase activity | 4.45E-04 |
| 18 | GO:0003735: structural constituent of ribosome | 4.82E-04 |
| 19 | GO:0008469: histone-arginine N-methyltransferase activity | 4.86E-04 |
| 20 | GO:0016531: copper chaperone activity | 4.86E-04 |
| 21 | GO:0000166: nucleotide binding | 5.57E-04 |
| 22 | GO:0009678: hydrogen-translocating pyrophosphatase activity | 6.95E-04 |
| 23 | GO:0005460: UDP-glucose transmembrane transporter activity | 6.95E-04 |
| 24 | GO:0010181: FMN binding | 9.31E-04 |
| 25 | GO:0005459: UDP-galactose transmembrane transporter activity | 1.16E-03 |
| 26 | GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity | 1.43E-03 |
| 27 | GO:0031369: translation initiation factor binding | 1.43E-03 |
| 28 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 1.97E-03 |
| 29 | GO:0008320: protein transmembrane transporter activity | 2.01E-03 |
| 30 | GO:0008235: metalloexopeptidase activity | 2.01E-03 |
| 31 | GO:0004427: inorganic diphosphatase activity | 2.01E-03 |
| 32 | GO:0008135: translation factor activity, RNA binding | 2.65E-03 |
| 33 | GO:0001055: RNA polymerase II activity | 3.36E-03 |
| 34 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.71E-03 |
| 35 | GO:0001054: RNA polymerase I activity | 4.12E-03 |
| 36 | GO:0004177: aminopeptidase activity | 4.12E-03 |
| 37 | GO:0044183: protein binding involved in protein folding | 4.12E-03 |
| 38 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 4.29E-03 |
| 39 | GO:0001056: RNA polymerase III activity | 4.52E-03 |
| 40 | GO:0031072: heat shock protein binding | 4.93E-03 |
| 41 | GO:0015114: phosphate ion transmembrane transporter activity | 4.93E-03 |
| 42 | GO:0005528: FK506 binding | 6.71E-03 |
| 43 | GO:0005509: calcium ion binding | 6.85E-03 |
| 44 | GO:0004298: threonine-type endopeptidase activity | 7.68E-03 |
| 45 | GO:0047134: protein-disulfide reductase activity | 9.75E-03 |
| 46 | GO:0003713: transcription coactivator activity | 1.09E-02 |
| 47 | GO:0004791: thioredoxin-disulfide reductase activity | 1.14E-02 |
| 48 | GO:0016853: isomerase activity | 1.14E-02 |
| 49 | GO:0003743: translation initiation factor activity | 1.23E-02 |
| 50 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 1.38E-02 |
| 51 | GO:0003729: mRNA binding | 1.41E-02 |
| 52 | GO:0030246: carbohydrate binding | 1.79E-02 |
| 53 | GO:0004721: phosphoprotein phosphatase activity | 1.83E-02 |
| 54 | GO:0008233: peptidase activity | 1.99E-02 |
| 55 | GO:0050897: cobalt ion binding | 2.19E-02 |
| 56 | GO:0005525: GTP binding | 2.30E-02 |
| 57 | GO:0042393: histone binding | 2.56E-02 |
| 58 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.56E-02 |
| 59 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.16E-02 |
| 60 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.16E-02 |
| 61 | GO:0015035: protein disulfide oxidoreductase activity | 4.53E-02 |
| 62 | GO:0008026: ATP-dependent helicase activity | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0034457: Mpp10 complex | 0.00E+00 |
| 2 | GO:0070545: PeBoW complex | 0.00E+00 |
| 3 | GO:0042719: mitochondrial intermembrane space protein transporter complex | 0.00E+00 |
| 4 | GO:0000327: lytic vacuole within protein storage vacuole | 0.00E+00 |
| 5 | GO:0005730: nucleolus | 8.42E-16 |
| 6 | GO:0005788: endoplasmic reticulum lumen | 4.33E-13 |
| 7 | GO:0005774: vacuolar membrane | 5.17E-11 |
| 8 | GO:0005783: endoplasmic reticulum | 9.18E-11 |
| 9 | GO:0032040: small-subunit processome | 6.59E-08 |
| 10 | GO:0031428: box C/D snoRNP complex | 2.11E-07 |
| 11 | GO:0015030: Cajal body | 2.71E-06 |
| 12 | GO:0005758: mitochondrial intermembrane space | 1.67E-05 |
| 13 | GO:0009506: plasmodesma | 6.10E-05 |
| 14 | GO:0030687: preribosome, large subunit precursor | 6.38E-05 |
| 15 | GO:0005829: cytosol | 6.68E-05 |
| 16 | GO:0005773: vacuole | 1.16E-04 |
| 17 | GO:0005739: mitochondrion | 1.75E-04 |
| 18 | GO:0000418: DNA-directed RNA polymerase IV complex | 1.83E-04 |
| 19 | GO:0005852: eukaryotic translation initiation factor 3 complex | 2.14E-04 |
| 20 | GO:0005665: DNA-directed RNA polymerase II, core complex | 2.48E-04 |
| 21 | GO:0035267: NuA4 histone acetyltransferase complex | 2.94E-04 |
| 22 | GO:0030134: ER to Golgi transport vesicle | 2.94E-04 |
| 23 | GO:0005840: ribosome | 5.01E-04 |
| 24 | GO:0080008: Cul4-RING E3 ubiquitin ligase complex | 5.16E-04 |
| 25 | GO:1990726: Lsm1-7-Pat1 complex | 6.95E-04 |
| 26 | GO:0005743: mitochondrial inner membrane | 1.00E-03 |
| 27 | GO:0016592: mediator complex | 1.13E-03 |
| 28 | GO:0030173: integral component of Golgi membrane | 1.71E-03 |
| 29 | GO:0016363: nuclear matrix | 1.71E-03 |
| 30 | GO:0005801: cis-Golgi network | 1.71E-03 |
| 31 | GO:0005688: U6 snRNP | 2.32E-03 |
| 32 | GO:0000326: protein storage vacuole | 2.65E-03 |
| 33 | GO:0046540: U4/U6 x U5 tri-snRNP complex | 2.65E-03 |
| 34 | GO:0005742: mitochondrial outer membrane translocase complex | 2.65E-03 |
| 35 | GO:0005736: DNA-directed RNA polymerase I complex | 3.00E-03 |
| 36 | GO:0005666: DNA-directed RNA polymerase III complex | 3.36E-03 |
| 37 | GO:0022625: cytosolic large ribosomal subunit | 3.85E-03 |
| 38 | GO:0019013: viral nucleocapsid | 4.93E-03 |
| 39 | GO:0005747: mitochondrial respiratory chain complex I | 5.22E-03 |
| 40 | GO:0005834: heterotrimeric G-protein complex | 5.39E-03 |
| 41 | GO:0030176: integral component of endoplasmic reticulum membrane | 5.80E-03 |
| 42 | GO:0000419: DNA-directed RNA polymerase V complex | 6.25E-03 |
| 43 | GO:0005732: small nucleolar ribonucleoprotein complex | 6.64E-03 |
| 44 | GO:0005618: cell wall | 6.90E-03 |
| 45 | GO:0005654: nucleoplasm | 7.42E-03 |
| 46 | GO:0005839: proteasome core complex | 7.68E-03 |
| 47 | GO:0005744: mitochondrial inner membrane presequence translocase complex | 9.21E-03 |
| 48 | GO:0005759: mitochondrial matrix | 9.58E-03 |
| 49 | GO:0009505: plant-type cell wall | 1.09E-02 |
| 50 | GO:0009507: chloroplast | 1.27E-02 |
| 51 | GO:0022627: cytosolic small ribosomal subunit | 1.40E-02 |
| 52 | GO:0030529: intracellular ribonucleoprotein complex | 1.63E-02 |
| 53 | GO:0005886: plasma membrane | 1.68E-02 |
| 54 | GO:0048046: apoplast | 1.81E-02 |
| 55 | GO:0019005: SCF ubiquitin ligase complex | 1.97E-02 |
| 56 | GO:0005794: Golgi apparatus | 2.30E-02 |
| 57 | GO:0000502: proteasome complex | 3.46E-02 |
| 58 | GO:0005681: spliceosomal complex | 3.89E-02 |