Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G52600

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0071433: cell wall repair0.00E+00
2GO:0072722: response to amitrole0.00E+00
3GO:0006042: glucosamine biosynthetic process0.00E+00
4GO:1901137: carbohydrate derivative biosynthetic process0.00E+00
5GO:0070212: protein poly-ADP-ribosylation0.00E+00
6GO:0045792: negative regulation of cell size0.00E+00
7GO:0090069: regulation of ribosome biogenesis0.00E+00
8GO:0042430: indole-containing compound metabolic process0.00E+00
9GO:0006457: protein folding1.14E-13
10GO:0034976: response to endoplasmic reticulum stress7.15E-09
11GO:0046686: response to cadmium ion7.65E-07
12GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response8.28E-07
13GO:0055074: calcium ion homeostasis5.48E-06
14GO:0042742: defense response to bacterium7.75E-06
15GO:0045454: cell redox homeostasis4.10E-05
16GO:0006468: protein phosphorylation4.42E-05
17GO:0010150: leaf senescence5.43E-05
18GO:0009617: response to bacterium8.00E-05
19GO:0010197: polar nucleus fusion1.00E-04
20GO:0000302: response to reactive oxygen species1.37E-04
21GO:0060862: negative regulation of floral organ abscission1.75E-04
22GO:0017183: peptidyl-diphthamide biosynthetic process from peptidyl-histidine1.75E-04
23GO:2000232: regulation of rRNA processing1.75E-04
24GO:0046244: salicylic acid catabolic process1.75E-04
25GO:0009553: embryo sac development1.77E-04
26GO:0010200: response to chitin2.28E-04
27GO:0009615: response to virus2.30E-04
28GO:0009555: pollen development2.65E-04
29GO:0071395: cellular response to jasmonic acid stimulus3.96E-04
30GO:0000463: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)3.96E-04
31GO:0031349: positive regulation of defense response3.96E-04
32GO:1902000: homogentisate catabolic process3.96E-04
33GO:0007166: cell surface receptor signaling pathway5.56E-04
34GO:0072661: protein targeting to plasma membrane6.47E-04
35GO:0010272: response to silver ion6.47E-04
36GO:0009072: aromatic amino acid family metabolic process6.47E-04
37GO:0048281: inflorescence morphogenesis6.47E-04
38GO:0010581: regulation of starch biosynthetic process6.47E-04
39GO:1902626: assembly of large subunit precursor of preribosome6.47E-04
40GO:1900140: regulation of seedling development6.47E-04
41GO:0000027: ribosomal large subunit assembly6.82E-04
42GO:0009863: salicylic acid mediated signaling pathway6.82E-04
43GO:0006364: rRNA processing8.98E-04
44GO:0030433: ubiquitin-dependent ERAD pathway8.98E-04
45GO:0002239: response to oomycetes9.23E-04
46GO:0072334: UDP-galactose transmembrane transport9.23E-04
47GO:0009855: determination of bilateral symmetry9.23E-04
48GO:0071323: cellular response to chitin9.23E-04
49GO:0006979: response to oxidative stress1.13E-03
50GO:0009626: plant-type hypersensitive response1.19E-03
51GO:0010188: response to microbial phytotoxin1.22E-03
52GO:0060548: negative regulation of cell death1.22E-03
53GO:0045088: regulation of innate immune response1.22E-03
54GO:0042273: ribosomal large subunit biogenesis1.22E-03
55GO:0006621: protein retention in ER lumen1.22E-03
56GO:0009651: response to salt stress1.33E-03
57GO:0006465: signal peptide processing1.56E-03
58GO:0046283: anthocyanin-containing compound metabolic process1.56E-03
59GO:0006564: L-serine biosynthetic process1.56E-03
60GO:0010193: response to ozone1.63E-03
61GO:0010942: positive regulation of cell death1.91E-03
62GO:0009920: cell plate formation involved in plant-type cell wall biogenesis1.91E-03
63GO:0000741: karyogamy1.91E-03
64GO:0009567: double fertilization forming a zygote and endosperm1.96E-03
65GO:0009408: response to heat2.19E-03
66GO:0009816: defense response to bacterium, incompatible interaction2.47E-03
67GO:0009627: systemic acquired resistance2.61E-03
68GO:0071446: cellular response to salicylic acid stimulus2.70E-03
69GO:0080186: developmental vegetative growth2.70E-03
70GO:0008219: cell death3.04E-03
71GO:0031540: regulation of anthocyanin biosynthetic process3.13E-03
72GO:0006102: isocitrate metabolic process3.13E-03
73GO:0009407: toxin catabolic process3.35E-03
74GO:0030968: endoplasmic reticulum unfolded protein response3.58E-03
75GO:0043562: cellular response to nitrogen levels3.58E-03
76GO:0001510: RNA methylation3.58E-03
77GO:0010204: defense response signaling pathway, resistance gene-independent3.58E-03
78GO:0006189: 'de novo' IMP biosynthetic process4.05E-03
79GO:0007338: single fertilization4.05E-03
80GO:0046685: response to arsenic-containing substance4.05E-03
81GO:0006952: defense response4.41E-03
82GO:0010205: photoinhibition4.54E-03
83GO:0043067: regulation of programmed cell death4.54E-03
84GO:0009299: mRNA transcription5.05E-03
85GO:0009870: defense response signaling pathway, resistance gene-dependent5.05E-03
86GO:0006032: chitin catabolic process5.05E-03
87GO:0000272: polysaccharide catabolic process5.58E-03
88GO:0015770: sucrose transport5.58E-03
89GO:0015706: nitrate transport6.13E-03
90GO:0006486: protein glycosylation6.66E-03
91GO:0010075: regulation of meristem growth6.70E-03
92GO:0016192: vesicle-mediated transport6.76E-03
93GO:0009934: regulation of meristem structural organization7.28E-03
94GO:0048467: gynoecium development7.28E-03
95GO:0034605: cellular response to heat7.28E-03
96GO:0002237: response to molecule of bacterial origin7.28E-03
97GO:0010167: response to nitrate7.89E-03
98GO:0009751: response to salicylic acid1.02E-02
99GO:0016998: cell wall macromolecule catabolic process1.05E-02
100GO:0019748: secondary metabolic process1.12E-02
101GO:0035428: hexose transmembrane transport1.12E-02
102GO:0009814: defense response, incompatible interaction1.12E-02
103GO:0009411: response to UV1.19E-02
104GO:0009625: response to insect1.19E-02
105GO:0009306: protein secretion1.26E-02
106GO:0009845: seed germination1.29E-02
107GO:0009790: embryo development1.39E-02
108GO:0034220: ion transmembrane transport1.41E-02
109GO:0042631: cellular response to water deprivation1.41E-02
110GO:0006662: glycerol ether metabolic process1.49E-02
111GO:0048868: pollen tube development1.49E-02
112GO:0046323: glucose import1.49E-02
113GO:0009960: endosperm development1.49E-02
114GO:0009646: response to absence of light1.56E-02
115GO:0006635: fatty acid beta-oxidation1.72E-02
116GO:0002229: defense response to oomycetes1.72E-02
117GO:0006891: intra-Golgi vesicle-mediated transport1.72E-02
118GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.84E-02
119GO:0030163: protein catabolic process1.89E-02
120GO:0042128: nitrate assimilation2.42E-02
121GO:0006906: vesicle fusion2.42E-02
122GO:0042254: ribosome biogenesis2.60E-02
123GO:0010043: response to zinc ion3.00E-02
124GO:0006511: ubiquitin-dependent protein catabolic process3.16E-02
125GO:0009867: jasmonic acid mediated signaling pathway3.20E-02
126GO:0045087: innate immune response3.20E-02
127GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway3.27E-02
128GO:0006099: tricarboxylic acid cycle3.31E-02
129GO:0034599: cellular response to oxidative stress3.31E-02
130GO:0006839: mitochondrial transport3.52E-02
131GO:0006887: exocytosis3.62E-02
132GO:0042542: response to hydrogen peroxide3.73E-02
133GO:0051707: response to other organism3.84E-02
134GO:0006886: intracellular protein transport3.90E-02
135GO:0009644: response to high light intensity4.06E-02
136GO:0008643: carbohydrate transport4.06E-02
137GO:0009636: response to toxic substance4.17E-02
138GO:0009965: leaf morphogenesis4.17E-02
139GO:0031347: regulation of defense response4.39E-02
140GO:0032259: methylation4.46E-02
141GO:0009846: pollen germination4.51E-02
142GO:0042538: hyperosmotic salinity response4.51E-02
143GO:0051603: proteolysis involved in cellular protein catabolic process4.86E-02
144GO:0010224: response to UV-B4.86E-02
RankGO TermAdjusted P value
1GO:0004360: glutamine-fructose-6-phosphate transaminase (isomerizing) activity0.00E+00
2GO:0016034: maleylacetoacetate isomerase activity0.00E+00
3GO:0004164: diphthine synthase activity0.00E+00
4GO:0005046: KDEL sequence binding0.00E+00
5GO:0051082: unfolded protein binding9.56E-10
6GO:0003756: protein disulfide isomerase activity2.10E-06
7GO:0005524: ATP binding6.78E-06
8GO:0004298: threonine-type endopeptidase activity4.66E-05
9GO:0030246: carbohydrate binding9.82E-05
10GO:0004714: transmembrane receptor protein tyrosine kinase activity1.35E-04
11GO:0042134: rRNA primary transcript binding1.75E-04
12GO:0004638: phosphoribosylaminoimidazole carboxylase activity1.75E-04
13GO:0097367: carbohydrate derivative binding1.75E-04
14GO:0080042: ADP-glucose pyrophosphohydrolase activity1.75E-04
15GO:0015165: pyrimidine nucleotide-sugar transmembrane transporter activity1.75E-04
16GO:0080041: ADP-ribose pyrophosphohydrolase activity3.96E-04
17GO:0004617: phosphoglycerate dehydrogenase activity3.96E-04
18GO:0017110: nucleoside-diphosphatase activity3.96E-04
19GO:0048531: beta-1,3-galactosyltransferase activity3.96E-04
20GO:0004675: transmembrane receptor protein serine/threonine kinase activity4.05E-04
21GO:0003746: translation elongation factor activity4.48E-04
22GO:0008061: chitin binding5.54E-04
23GO:0052692: raffinose alpha-galactosidase activity6.47E-04
24GO:0000030: mannosyltransferase activity6.47E-04
25GO:0004557: alpha-galactosidase activity6.47E-04
26GO:0051287: NAD binding7.87E-04
27GO:0004449: isocitrate dehydrogenase (NAD+) activity9.23E-04
28GO:0005460: UDP-glucose transmembrane transporter activity9.23E-04
29GO:0046923: ER retention sequence binding1.22E-03
30GO:0047631: ADP-ribose diphosphatase activity1.56E-03
31GO:0005459: UDP-galactose transmembrane transporter activity1.56E-03
32GO:0015145: monosaccharide transmembrane transporter activity1.56E-03
33GO:0000210: NAD+ diphosphatase activity1.91E-03
34GO:0003860: 3-hydroxyisobutyryl-CoA hydrolase activity1.91E-03
35GO:0016301: kinase activity2.05E-03
36GO:0004672: protein kinase activity2.38E-03
37GO:0008506: sucrose:proton symporter activity2.70E-03
38GO:0030515: snoRNA binding2.70E-03
39GO:0008320: protein transmembrane transporter activity2.70E-03
40GO:0004674: protein serine/threonine kinase activity3.33E-03
41GO:0008135: translation factor activity, RNA binding3.58E-03
42GO:0008173: RNA methyltransferase activity3.58E-03
43GO:0005509: calcium ion binding3.64E-03
44GO:0015112: nitrate transmembrane transporter activity4.54E-03
45GO:0004364: glutathione transferase activity4.75E-03
46GO:0004568: chitinase activity5.05E-03
47GO:0004713: protein tyrosine kinase activity5.05E-03
48GO:0008233: peptidase activity6.21E-03
49GO:0031072: heat shock protein binding6.70E-03
50GO:0015114: phosphate ion transmembrane transporter activity6.70E-03
51GO:0004190: aspartic-type endopeptidase activity7.89E-03
52GO:0015035: protein disulfide oxidoreductase activity9.78E-03
53GO:0033612: receptor serine/threonine kinase binding1.05E-02
54GO:0022891: substrate-specific transmembrane transporter activity1.19E-02
55GO:0047134: protein-disulfide reductase activity1.33E-02
56GO:0003713: transcription coactivator activity1.49E-02
57GO:0004791: thioredoxin-disulfide reductase activity1.56E-02
58GO:0016853: isomerase activity1.56E-02
59GO:0005355: glucose transmembrane transporter activity1.56E-02
60GO:0004872: receptor activity1.64E-02
61GO:0005515: protein binding1.69E-02
62GO:0016887: ATPase activity1.82E-02
63GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor1.89E-02
64GO:0008483: transaminase activity2.06E-02
65GO:0016597: amino acid binding2.15E-02
66GO:0015250: water channel activity2.24E-02
67GO:0051213: dioxygenase activity2.24E-02
68GO:0008168: methyltransferase activity2.46E-02
69GO:0004222: metalloendopeptidase activity2.90E-02
70GO:0050897: cobalt ion binding3.00E-02
71GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.20E-02
72GO:0061630: ubiquitin protein ligase activity3.33E-02
73GO:0000149: SNARE binding3.41E-02
74GO:0005484: SNAP receptor activity3.84E-02
75GO:0005525: GTP binding4.00E-02
76GO:0016787: hydrolase activity4.65E-02
77GO:0016298: lipase activity4.86E-02
RankGO TermAdjusted P value
1GO:0000327: lytic vacuole within protein storage vacuole0.00E+00
2GO:0034457: Mpp10 complex0.00E+00
3GO:0005788: endoplasmic reticulum lumen4.30E-16
4GO:0005783: endoplasmic reticulum6.50E-16
5GO:0005886: plasma membrane1.05E-07
6GO:0005774: vacuolar membrane5.11E-06
7GO:0005839: proteasome core complex4.66E-05
8GO:0005801: cis-Golgi network7.89E-05
9GO:0009507: chloroplast1.26E-04
10GO:0019773: proteasome core complex, alpha-subunit complex1.69E-04
11GO:0031351: integral component of plastid membrane1.75E-04
12GO:0005789: endoplasmic reticulum membrane1.87E-04
13GO:0070545: PeBoW complex3.96E-04
14GO:0030134: ER to Golgi transport vesicle3.96E-04
15GO:0016021: integral component of membrane4.36E-04
16GO:0009505: plant-type cell wall4.70E-04
17GO:0000502: proteasome complex8.98E-04
18GO:0030660: Golgi-associated vesicle membrane1.22E-03
19GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane1.22E-03
20GO:0005773: vacuole1.40E-03
21GO:0005618: cell wall1.98E-03
22GO:0030173: integral component of Golgi membrane2.30E-03
23GO:0016363: nuclear matrix2.30E-03
24GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane3.13E-03
25GO:0000326: protein storage vacuole3.58E-03
26GO:0031901: early endosome membrane4.05E-03
27GO:0031090: organelle membrane4.05E-03
28GO:0015030: Cajal body4.54E-03
29GO:0048046: apoplast4.84E-03
30GO:0005740: mitochondrial envelope5.05E-03
31GO:0005765: lysosomal membrane5.58E-03
32GO:0032040: small-subunit processome6.13E-03
33GO:0031012: extracellular matrix6.70E-03
34GO:0019013: viral nucleocapsid6.70E-03
35GO:0005795: Golgi stack7.89E-03
36GO:0030176: integral component of endoplasmic reticulum membrane7.89E-03
37GO:0005730: nucleolus1.05E-02
38GO:0005741: mitochondrial outer membrane1.05E-02
39GO:0009504: cell plate1.64E-02
40GO:0016592: mediator complex1.81E-02
41GO:0016020: membrane3.17E-02
42GO:0009506: plasmodesma3.20E-02
43GO:0022625: cytosolic large ribosomal subunit3.33E-02
44GO:0005819: spindle3.41E-02
45GO:0031201: SNARE complex3.62E-02
46GO:0005739: mitochondrion3.89E-02
47GO:0005829: cytosol4.20E-02
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Gene type



Gene DE type