GO Enrichment Analysis of Co-expressed Genes with
AT1G52340
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0035674: tricarboxylic acid transmembrane transport | 0.00E+00 |
| 2 | GO:0060416: response to growth hormone | 0.00E+00 |
| 3 | GO:0016120: carotene biosynthetic process | 3.00E-05 |
| 4 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 4.48E-05 |
| 5 | GO:0006810: transport | 9.28E-05 |
| 6 | GO:0051180: vitamin transport | 1.52E-04 |
| 7 | GO:0030974: thiamine pyrophosphate transport | 1.52E-04 |
| 8 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.52E-04 |
| 9 | GO:1904964: positive regulation of phytol biosynthetic process | 1.52E-04 |
| 10 | GO:0043686: co-translational protein modification | 1.52E-04 |
| 11 | GO:0006835: dicarboxylic acid transport | 1.52E-04 |
| 12 | GO:0071588: hydrogen peroxide mediated signaling pathway | 1.52E-04 |
| 13 | GO:0009773: photosynthetic electron transport in photosystem I | 2.75E-04 |
| 14 | GO:0007623: circadian rhythm | 3.29E-04 |
| 15 | GO:0015893: drug transport | 3.47E-04 |
| 16 | GO:0080148: negative regulation of response to water deprivation | 3.47E-04 |
| 17 | GO:0010275: NAD(P)H dehydrogenase complex assembly | 3.47E-04 |
| 18 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 3.47E-04 |
| 19 | GO:0006954: inflammatory response | 5.68E-04 |
| 20 | GO:0090391: granum assembly | 5.68E-04 |
| 21 | GO:0031408: oxylipin biosynthetic process | 6.79E-04 |
| 22 | GO:0009800: cinnamic acid biosynthetic process | 8.13E-04 |
| 23 | GO:0006168: adenine salvage | 8.13E-04 |
| 24 | GO:0006166: purine ribonucleoside salvage | 8.13E-04 |
| 25 | GO:0010239: chloroplast mRNA processing | 8.13E-04 |
| 26 | GO:0080170: hydrogen peroxide transmembrane transport | 8.13E-04 |
| 27 | GO:0006749: glutathione metabolic process | 1.08E-03 |
| 28 | GO:0009765: photosynthesis, light harvesting | 1.08E-03 |
| 29 | GO:0006183: GTP biosynthetic process | 1.08E-03 |
| 30 | GO:0045727: positive regulation of translation | 1.08E-03 |
| 31 | GO:0055085: transmembrane transport | 1.29E-03 |
| 32 | GO:0006869: lipid transport | 1.35E-03 |
| 33 | GO:0006564: L-serine biosynthetic process | 1.36E-03 |
| 34 | GO:0031365: N-terminal protein amino acid modification | 1.36E-03 |
| 35 | GO:0044209: AMP salvage | 1.36E-03 |
| 36 | GO:0006629: lipid metabolic process | 1.61E-03 |
| 37 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 1.67E-03 |
| 38 | GO:0035435: phosphate ion transmembrane transport | 1.67E-03 |
| 39 | GO:0010190: cytochrome b6f complex assembly | 1.67E-03 |
| 40 | GO:0010405: arabinogalactan protein metabolic process | 1.67E-03 |
| 41 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.67E-03 |
| 42 | GO:0006559: L-phenylalanine catabolic process | 1.67E-03 |
| 43 | GO:0010027: thylakoid membrane organization | 1.92E-03 |
| 44 | GO:1901259: chloroplast rRNA processing | 2.01E-03 |
| 45 | GO:0006694: steroid biosynthetic process | 2.01E-03 |
| 46 | GO:0010019: chloroplast-nucleus signaling pathway | 2.01E-03 |
| 47 | GO:1900057: positive regulation of leaf senescence | 2.36E-03 |
| 48 | GO:0010444: guard mother cell differentiation | 2.36E-03 |
| 49 | GO:0006400: tRNA modification | 2.36E-03 |
| 50 | GO:0009395: phospholipid catabolic process | 2.36E-03 |
| 51 | GO:0010196: nonphotochemical quenching | 2.36E-03 |
| 52 | GO:0018298: protein-chromophore linkage | 2.49E-03 |
| 53 | GO:0006353: DNA-templated transcription, termination | 2.73E-03 |
| 54 | GO:0006605: protein targeting | 2.73E-03 |
| 55 | GO:0009704: de-etiolation | 2.73E-03 |
| 56 | GO:0031540: regulation of anthocyanin biosynthetic process | 2.73E-03 |
| 57 | GO:0016559: peroxisome fission | 2.73E-03 |
| 58 | GO:0009407: toxin catabolic process | 2.75E-03 |
| 59 | GO:0032544: plastid translation | 3.12E-03 |
| 60 | GO:0009808: lignin metabolic process | 3.12E-03 |
| 61 | GO:0009699: phenylpropanoid biosynthetic process | 3.12E-03 |
| 62 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 3.53E-03 |
| 63 | GO:0009051: pentose-phosphate shunt, oxidative branch | 3.53E-03 |
| 64 | GO:0006839: mitochondrial transport | 3.59E-03 |
| 65 | GO:0010205: photoinhibition | 3.96E-03 |
| 66 | GO:0009638: phototropism | 3.96E-03 |
| 67 | GO:0009636: response to toxic substance | 4.55E-03 |
| 68 | GO:0080167: response to karrikin | 4.91E-03 |
| 69 | GO:0015979: photosynthesis | 5.81E-03 |
| 70 | GO:0006006: glucose metabolic process | 5.83E-03 |
| 71 | GO:0010229: inflorescence development | 5.83E-03 |
| 72 | GO:0009718: anthocyanin-containing compound biosynthetic process | 5.83E-03 |
| 73 | GO:0009725: response to hormone | 5.83E-03 |
| 74 | GO:0005975: carbohydrate metabolic process | 6.10E-03 |
| 75 | GO:0048467: gynoecium development | 6.33E-03 |
| 76 | GO:0010020: chloroplast fission | 6.33E-03 |
| 77 | GO:0006096: glycolytic process | 6.45E-03 |
| 78 | GO:0010025: wax biosynthetic process | 7.40E-03 |
| 79 | GO:0006636: unsaturated fatty acid biosynthetic process | 7.40E-03 |
| 80 | GO:0042023: DNA endoreduplication | 7.40E-03 |
| 81 | GO:0006833: water transport | 7.40E-03 |
| 82 | GO:0007010: cytoskeleton organization | 7.95E-03 |
| 83 | GO:0007017: microtubule-based process | 8.51E-03 |
| 84 | GO:0009695: jasmonic acid biosynthetic process | 8.51E-03 |
| 85 | GO:0016998: cell wall macromolecule catabolic process | 9.10E-03 |
| 86 | GO:0019722: calcium-mediated signaling | 1.09E-02 |
| 87 | GO:0006817: phosphate ion transport | 1.09E-02 |
| 88 | GO:0042127: regulation of cell proliferation | 1.09E-02 |
| 89 | GO:0009306: protein secretion | 1.09E-02 |
| 90 | GO:0042744: hydrogen peroxide catabolic process | 1.11E-02 |
| 91 | GO:0016117: carotenoid biosynthetic process | 1.16E-02 |
| 92 | GO:0042335: cuticle development | 1.22E-02 |
| 93 | GO:0034220: ion transmembrane transport | 1.22E-02 |
| 94 | GO:0000413: protein peptidyl-prolyl isomerization | 1.22E-02 |
| 95 | GO:0055114: oxidation-reduction process | 1.47E-02 |
| 96 | GO:0009735: response to cytokinin | 1.49E-02 |
| 97 | GO:0000302: response to reactive oxygen species | 1.50E-02 |
| 98 | GO:0016132: brassinosteroid biosynthetic process | 1.50E-02 |
| 99 | GO:0071554: cell wall organization or biogenesis | 1.50E-02 |
| 100 | GO:0010583: response to cyclopentenone | 1.57E-02 |
| 101 | GO:1901657: glycosyl compound metabolic process | 1.64E-02 |
| 102 | GO:0009416: response to light stimulus | 1.67E-02 |
| 103 | GO:0010252: auxin homeostasis | 1.71E-02 |
| 104 | GO:0007267: cell-cell signaling | 1.79E-02 |
| 105 | GO:0042128: nitrate assimilation | 2.10E-02 |
| 106 | GO:0010411: xyloglucan metabolic process | 2.18E-02 |
| 107 | GO:0015995: chlorophyll biosynthetic process | 2.18E-02 |
| 108 | GO:0016311: dephosphorylation | 2.26E-02 |
| 109 | GO:0007049: cell cycle | 2.33E-02 |
| 110 | GO:0000160: phosphorelay signal transduction system | 2.43E-02 |
| 111 | GO:0009834: plant-type secondary cell wall biogenesis | 2.51E-02 |
| 112 | GO:0009631: cold acclimation | 2.60E-02 |
| 113 | GO:0048527: lateral root development | 2.60E-02 |
| 114 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 2.68E-02 |
| 115 | GO:0034599: cellular response to oxidative stress | 2.86E-02 |
| 116 | GO:0008283: cell proliferation | 3.32E-02 |
| 117 | GO:0009744: response to sucrose | 3.32E-02 |
| 118 | GO:0051707: response to other organism | 3.32E-02 |
| 119 | GO:0042546: cell wall biogenesis | 3.42E-02 |
| 120 | GO:0009737: response to abscisic acid | 3.45E-02 |
| 121 | GO:0009644: response to high light intensity | 3.52E-02 |
| 122 | GO:0008643: carbohydrate transport | 3.52E-02 |
| 123 | GO:0006855: drug transmembrane transport | 3.71E-02 |
| 124 | GO:0042538: hyperosmotic salinity response | 3.91E-02 |
| 125 | GO:0071555: cell wall organization | 4.03E-02 |
| 126 | GO:0006979: response to oxidative stress | 4.07E-02 |
| 127 | GO:0009585: red, far-red light phototransduction | 4.11E-02 |
| 128 | GO:0009736: cytokinin-activated signaling pathway | 4.11E-02 |
| 129 | GO:0006364: rRNA processing | 4.11E-02 |
| 130 | GO:0006857: oligopeptide transport | 4.31E-02 |
| 131 | GO:0048316: seed development | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 2 | GO:0090471: 9,15,9'-tri-cis-zeta-carotene isomerase activity | 0.00E+00 |
| 3 | GO:0019146: arabinose-5-phosphate isomerase activity | 0.00E+00 |
| 4 | GO:0015142: tricarboxylic acid transmembrane transporter activity | 0.00E+00 |
| 5 | GO:0050614: delta24-sterol reductase activity | 0.00E+00 |
| 6 | GO:0045436: lycopene beta cyclase activity | 0.00E+00 |
| 7 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 8 | GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity | 0.00E+00 |
| 9 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.84E-05 |
| 10 | GO:0042586: peptide deformylase activity | 1.52E-04 |
| 11 | GO:0004321: fatty-acyl-CoA synthase activity | 1.52E-04 |
| 12 | GO:0004328: formamidase activity | 1.52E-04 |
| 13 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.52E-04 |
| 14 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.52E-04 |
| 15 | GO:0090422: thiamine pyrophosphate transporter activity | 1.52E-04 |
| 16 | GO:0004617: phosphoglycerate dehydrogenase activity | 3.47E-04 |
| 17 | GO:0003938: IMP dehydrogenase activity | 3.47E-04 |
| 18 | GO:0008081: phosphoric diester hydrolase activity | 3.61E-04 |
| 19 | GO:0004565: beta-galactosidase activity | 3.61E-04 |
| 20 | GO:0005310: dicarboxylic acid transmembrane transporter activity | 5.68E-04 |
| 21 | GO:0045548: phenylalanine ammonia-lyase activity | 5.68E-04 |
| 22 | GO:0022891: substrate-specific transmembrane transporter activity | 8.07E-04 |
| 23 | GO:0003999: adenine phosphoribosyltransferase activity | 8.13E-04 |
| 24 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 8.13E-04 |
| 25 | GO:0003865: 3-oxo-5-alpha-steroid 4-dehydrogenase activity | 8.13E-04 |
| 26 | GO:0017077: oxidative phosphorylation uncoupler activity | 8.13E-04 |
| 27 | GO:0001872: (1->3)-beta-D-glucan binding | 8.13E-04 |
| 28 | GO:0005215: transporter activity | 9.10E-04 |
| 29 | GO:0043495: protein anchor | 1.08E-03 |
| 30 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 1.08E-03 |
| 31 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.08E-03 |
| 32 | GO:0052793: pectin acetylesterase activity | 1.08E-03 |
| 33 | GO:0019843: rRNA binding | 1.43E-03 |
| 34 | GO:0016688: L-ascorbate peroxidase activity | 1.67E-03 |
| 35 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 1.67E-03 |
| 36 | GO:0004130: cytochrome-c peroxidase activity | 1.67E-03 |
| 37 | GO:0016168: chlorophyll binding | 2.03E-03 |
| 38 | GO:0019899: enzyme binding | 2.36E-03 |
| 39 | GO:0008289: lipid binding | 2.66E-03 |
| 40 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 2.91E-03 |
| 41 | GO:0042802: identical protein binding | 2.91E-03 |
| 42 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.12E-03 |
| 43 | GO:0003993: acid phosphatase activity | 3.29E-03 |
| 44 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 3.53E-03 |
| 45 | GO:0016207: 4-coumarate-CoA ligase activity | 3.53E-03 |
| 46 | GO:0016788: hydrolase activity, acting on ester bonds | 3.83E-03 |
| 47 | GO:0004364: glutathione transferase activity | 3.89E-03 |
| 48 | GO:0015293: symporter activity | 4.55E-03 |
| 49 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.72E-03 |
| 50 | GO:0047372: acylglycerol lipase activity | 4.86E-03 |
| 51 | GO:0052689: carboxylic ester hydrolase activity | 5.58E-03 |
| 52 | GO:0005315: inorganic phosphate transmembrane transporter activity | 5.83E-03 |
| 53 | GO:0015114: phosphate ion transmembrane transporter activity | 5.83E-03 |
| 54 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 5.86E-03 |
| 55 | GO:0008266: poly(U) RNA binding | 6.33E-03 |
| 56 | GO:0004871: signal transducer activity | 6.55E-03 |
| 57 | GO:0008146: sulfotransferase activity | 6.86E-03 |
| 58 | GO:0005528: FK506 binding | 7.95E-03 |
| 59 | GO:0043424: protein histidine kinase binding | 8.51E-03 |
| 60 | GO:0008514: organic anion transmembrane transporter activity | 1.09E-02 |
| 61 | GO:0050662: coenzyme binding | 1.36E-02 |
| 62 | GO:0008017: microtubule binding | 1.41E-02 |
| 63 | GO:0004872: receptor activity | 1.42E-02 |
| 64 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.50E-02 |
| 65 | GO:0004518: nuclease activity | 1.57E-02 |
| 66 | GO:0000156: phosphorelay response regulator activity | 1.64E-02 |
| 67 | GO:0005200: structural constituent of cytoskeleton | 1.79E-02 |
| 68 | GO:0016597: amino acid binding | 1.86E-02 |
| 69 | GO:0016413: O-acetyltransferase activity | 1.86E-02 |
| 70 | GO:0015250: water channel activity | 1.94E-02 |
| 71 | GO:0030247: polysaccharide binding | 2.18E-02 |
| 72 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.18E-02 |
| 73 | GO:0102483: scopolin beta-glucosidase activity | 2.18E-02 |
| 74 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.34E-02 |
| 75 | GO:0030246: carbohydrate binding | 2.43E-02 |
| 76 | GO:0015238: drug transmembrane transporter activity | 2.43E-02 |
| 77 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 2.51E-02 |
| 78 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 2.60E-02 |
| 79 | GO:0008422: beta-glucosidase activity | 2.95E-02 |
| 80 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.05E-02 |
| 81 | GO:0050661: NADP binding | 3.05E-02 |
| 82 | GO:0043621: protein self-association | 3.52E-02 |
| 83 | GO:0003924: GTPase activity | 3.81E-02 |
| 84 | GO:0051287: NAD binding | 3.81E-02 |
| 85 | GO:0003690: double-stranded DNA binding | 4.21E-02 |
| 86 | GO:0031625: ubiquitin protein ligase binding | 4.42E-02 |
| 87 | GO:0003824: catalytic activity | 4.51E-02 |
| 88 | GO:0005515: protein binding | 4.64E-02 |
| 89 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.95E-02 |
| 90 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010240: plastid pyruvate dehydrogenase complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 8.03E-11 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 1.17E-05 |
| 4 | GO:0046658: anchored component of plasma membrane | 6.47E-05 |
| 5 | GO:0009515: granal stacked thylakoid | 1.52E-04 |
| 6 | GO:0010598: NAD(P)H dehydrogenase complex (plastoquinone) | 1.66E-04 |
| 7 | GO:0005886: plasma membrane | 2.41E-04 |
| 8 | GO:0009941: chloroplast envelope | 6.03E-04 |
| 9 | GO:0016021: integral component of membrane | 1.06E-03 |
| 10 | GO:0009534: chloroplast thylakoid | 1.19E-03 |
| 11 | GO:0009523: photosystem II | 1.25E-03 |
| 12 | GO:0009570: chloroplast stroma | 1.42E-03 |
| 13 | GO:0009543: chloroplast thylakoid lumen | 1.43E-03 |
| 14 | GO:0009533: chloroplast stromal thylakoid | 2.36E-03 |
| 15 | GO:0048046: apoplast | 3.11E-03 |
| 16 | GO:0045298: tubulin complex | 3.53E-03 |
| 17 | GO:0008180: COP9 signalosome | 3.53E-03 |
| 18 | GO:0031969: chloroplast membrane | 4.91E-03 |
| 19 | GO:0009579: thylakoid | 5.05E-03 |
| 20 | GO:0031225: anchored component of membrane | 7.55E-03 |
| 21 | GO:0042651: thylakoid membrane | 8.51E-03 |
| 22 | GO:0009505: plant-type cell wall | 1.58E-02 |
| 23 | GO:0030529: intracellular ribonucleoprotein complex | 1.94E-02 |
| 24 | GO:0005773: vacuole | 1.95E-02 |
| 25 | GO:0009506: plasmodesma | 2.04E-02 |
| 26 | GO:0019005: SCF ubiquitin ligase complex | 2.34E-02 |
| 27 | GO:0009707: chloroplast outer membrane | 2.34E-02 |
| 28 | GO:0005874: microtubule | 2.50E-02 |
| 29 | GO:0031977: thylakoid lumen | 3.14E-02 |
| 30 | GO:0005618: cell wall | 3.15E-02 |
| 31 | GO:0005743: mitochondrial inner membrane | 3.55E-02 |
| 32 | GO:0000502: proteasome complex | 4.11E-02 |