co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT1G52140

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation	0.00E+00
2	GO:0007638: mechanosensory behavior	0.00E+00
3	GO:0006223: uracil salvage	0.00E+00
4	GO:0006633: fatty acid biosynthetic process	3.75E-05
5	GO:0048640: negative regulation of developmental growth	6.58E-05
6	GO:1902458: positive regulation of stomatal opening	6.58E-05
7	GO:1903426: regulation of reactive oxygen species biosynthetic process	1.59E-04
8	GO:2000123: positive regulation of stomatal complex development	1.59E-04
9	GO:0006833: water transport	1.62E-04
10	GO:2001295: malonyl-CoA biosynthetic process	2.69E-04
11	GO:0042335: cuticle development	3.43E-04
12	GO:0034220: ion transmembrane transport	3.43E-04
13	GO:0051016: barbed-end actin filament capping	3.90E-04
14	GO:0007231: osmosensory signaling pathway	3.90E-04
15	GO:0009765: photosynthesis, light harvesting	5.20E-04
16	GO:0006183: GTP biosynthetic process	5.20E-04
17	GO:0044206: UMP salvage	5.20E-04
18	GO:2000122: negative regulation of stomatal complex development	5.20E-04
19	GO:0033500: carbohydrate homeostasis	5.20E-04
20	GO:2000038: regulation of stomatal complex development	5.20E-04
21	GO:0010037: response to carbon dioxide	5.20E-04
22	GO:0015976: carbon utilization	5.20E-04
23	GO:0007267: cell-cell signaling	5.82E-04
24	GO:0010375: stomatal complex patterning	6.60E-04
25	GO:0016120: carotene biosynthetic process	6.60E-04
26	GO:0043097: pyrimidine nucleoside salvage	6.60E-04
27	GO:0045038: protein import into chloroplast thylakoid membrane	6.60E-04
28	GO:0016123: xanthophyll biosynthetic process	6.60E-04
29	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	8.06E-04
30	GO:0006206: pyrimidine nucleobase metabolic process	8.06E-04
31	GO:0006596: polyamine biosynthetic process	8.06E-04
32	GO:0048759: xylem vessel member cell differentiation	8.06E-04
33	GO:0009955: adaxial/abaxial pattern specification	9.59E-04
34	GO:1901259: chloroplast rRNA processing	9.59E-04
35	GO:0042372: phylloquinone biosynthetic process	9.59E-04
36	GO:0006694: steroid biosynthetic process	9.59E-04
37	GO:0051693: actin filament capping	1.12E-03
38	GO:0030497: fatty acid elongation	1.12E-03
39	GO:2000070: regulation of response to water deprivation	1.29E-03
40	GO:0009932: cell tip growth	1.47E-03
41	GO:0015996: chlorophyll catabolic process	1.47E-03
42	GO:0007186: G-protein coupled receptor signaling pathway	1.47E-03
43	GO:0032544: plastid translation	1.47E-03
44	GO:0009808: lignin metabolic process	1.47E-03
45	GO:0090305: nucleic acid phosphodiester bond hydrolysis	1.65E-03
46	GO:0000902: cell morphogenesis	1.65E-03
47	GO:0042761: very long-chain fatty acid biosynthetic process	1.85E-03
48	GO:0009870: defense response signaling pathway, resistance gene-dependent	2.05E-03
49	GO:0043069: negative regulation of programmed cell death	2.05E-03
50	GO:0000038: very long-chain fatty acid metabolic process	2.26E-03
51	GO:0006816: calcium ion transport	2.26E-03
52	GO:0019684: photosynthesis, light reaction	2.26E-03
53	GO:0009089: lysine biosynthetic process via diaminopimelate	2.26E-03
54	GO:0045037: protein import into chloroplast stroma	2.48E-03
55	GO:0030036: actin cytoskeleton organization	2.70E-03
56	GO:0009725: response to hormone	2.70E-03
57	GO:0010207: photosystem II assembly	2.93E-03
58	GO:0007015: actin filament organization	2.93E-03
59	GO:0070588: calcium ion transmembrane transport	3.16E-03
60	GO:0010025: wax biosynthetic process	3.40E-03
61	GO:0009116: nucleoside metabolic process	3.65E-03
62	GO:0000027: ribosomal large subunit assembly	3.65E-03
63	GO:0005992: trehalose biosynthetic process	3.65E-03
64	GO:0051302: regulation of cell division	3.90E-03
65	GO:0007017: microtubule-based process	3.90E-03
66	GO:0061077: chaperone-mediated protein folding	4.17E-03
67	GO:0006284: base-excision repair	4.98E-03
68	GO:0019722: calcium-mediated signaling	4.98E-03
69	GO:0016117: carotenoid biosynthetic process	5.26E-03
70	GO:0055085: transmembrane transport	5.34E-03
71	GO:0010087: phloem or xylem histogenesis	5.55E-03
72	GO:0010182: sugar mediated signaling pathway	5.85E-03
73	GO:0009826: unidimensional cell growth	6.45E-03
74	GO:0016132: brassinosteroid biosynthetic process	6.76E-03
75	GO:0042254: ribosome biogenesis	6.82E-03
76	GO:0010583: response to cyclopentenone	7.08E-03
77	GO:0032502: developmental process	7.08E-03
78	GO:1901657: glycosyl compound metabolic process	7.40E-03
79	GO:0010027: thylakoid membrane organization	8.74E-03
80	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	9.08E-03
81	GO:0071555: cell wall organization	9.67E-03
82	GO:0010411: xyloglucan metabolic process	9.79E-03
83	GO:0006869: lipid transport	1.09E-02
84	GO:0000160: phosphorelay signal transduction system	1.09E-02
85	GO:0009834: plant-type secondary cell wall biogenesis	1.13E-02
86	GO:0009407: toxin catabolic process	1.13E-02
87	GO:0010119: regulation of stomatal movement	1.17E-02
88	GO:0006631: fatty acid metabolic process	1.40E-02
89	GO:0009409: response to cold	1.42E-02
90	GO:0009926: auxin polar transport	1.49E-02
91	GO:0009744: response to sucrose	1.49E-02
92	GO:0042546: cell wall biogenesis	1.53E-02
93	GO:0008643: carbohydrate transport	1.57E-02
94	GO:0009636: response to toxic substance	1.62E-02
95	GO:0009736: cytokinin-activated signaling pathway	1.84E-02
96	GO:0006857: oligopeptide transport	1.93E-02
97	GO:0009416: response to light stimulus	2.18E-02
98	GO:0006412: translation	2.40E-02
99	GO:0055114: oxidation-reduction process	2.45E-02
100	GO:0042744: hydrogen peroxide catabolic process	3.04E-02
101	GO:0016036: cellular response to phosphate starvation	3.32E-02
102	GO:0045490: pectin catabolic process	3.49E-02
103	GO:0009651: response to salt stress	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity	0.00E+00
2	GO:0050518: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity	0.00E+00
3	GO:0010487: thermospermine synthase activity	0.00E+00
4	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
5	GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity	0.00E+00
6	GO:0008756: o-succinylbenzoate-CoA ligase activity	0.00E+00
7	GO:0019146: arabinose-5-phosphate isomerase activity	0.00E+00
8	GO:0050614: delta24-sterol reductase activity	0.00E+00
9	GO:0080132: fatty acid alpha-hydroxylase activity	6.58E-05
10	GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity	6.58E-05
11	GO:0016768: spermine synthase activity	6.58E-05
12	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	1.59E-04
13	GO:0003938: IMP dehydrogenase activity	1.59E-04
14	GO:0004075: biotin carboxylase activity	2.69E-04
15	GO:0019843: rRNA binding	3.48E-04
16	GO:0052793: pectin acetylesterase activity	5.20E-04
17	GO:0004845: uracil phosphoribosyltransferase activity	5.20E-04
18	GO:0015250: water channel activity	6.52E-04
19	GO:0009922: fatty acid elongase activity	6.60E-04
20	GO:0003989: acetyl-CoA carboxylase activity	6.60E-04
21	GO:0008725: DNA-3-methyladenine glycosylase activity	6.60E-04
22	GO:0016208: AMP binding	8.06E-04
23	GO:0004849: uridine kinase activity	9.59E-04
24	GO:0004805: trehalose-phosphatase activity	2.05E-03
25	GO:0004089: carbonate dehydratase activity	2.70E-03
26	GO:0005262: calcium channel activity	2.70E-03
27	GO:0008146: sulfotransferase activity	3.16E-03
28	GO:0004725: protein tyrosine phosphatase activity	3.40E-03
29	GO:0102336: 3-oxo-arachidoyl-CoA synthase activity	3.40E-03
30	GO:0102337: 3-oxo-cerotoyl-CoA synthase activity	3.40E-03
31	GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity	3.40E-03
32	GO:0005528: FK506 binding	3.65E-03
33	GO:0030570: pectate lyase activity	4.70E-03
34	GO:0008514: organic anion transmembrane transporter activity	4.98E-03
35	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	5.61E-03
36	GO:0003735: structural constituent of ribosome	5.64E-03
37	GO:0019901: protein kinase binding	6.45E-03
38	GO:0004872: receptor activity	6.45E-03
39	GO:0016762: xyloglucan:xyloglucosyl transferase activity	6.76E-03
40	GO:0004518: nuclease activity	7.08E-03
41	GO:0000156: phosphorelay response regulator activity	7.40E-03
42	GO:0051015: actin filament binding	7.40E-03
43	GO:0016722: oxidoreductase activity, oxidizing metal ions	8.06E-03
44	GO:0005200: structural constituent of cytoskeleton	8.06E-03
45	GO:0052689: carboxylic ester hydrolase activity	9.17E-03
46	GO:0102483: scopolin beta-glucosidase activity	9.79E-03
47	GO:0016798: hydrolase activity, acting on glycosyl bonds	9.79E-03
48	GO:0005215: transporter activity	1.10E-02
49	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	1.17E-02
50	GO:0008422: beta-glucosidase activity	1.32E-02
51	GO:0004364: glutathione transferase activity	1.45E-02
52	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	1.66E-02
53	GO:0008289: lipid binding	1.71E-02
54	GO:0022857: transmembrane transporter activity	2.26E-02
55	GO:0016746: transferase activity, transferring acyl groups	2.41E-02
56	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.82E-02
57	GO:0005516: calmodulin binding	3.29E-02
58	GO:0005525: GTP binding	3.59E-02
59	GO:0042802: identical protein binding	4.13E-02
60	GO:0004601: peroxidase activity	4.75E-02
61	GO:0003824: catalytic activity	4.83E-02

Rank	GO Term	Adjusted P value
1	GO:0031225: anchored component of membrane	2.46E-06
2	GO:0009923: fatty acid elongase complex	6.58E-05
3	GO:0008290: F-actin capping protein complex	1.59E-04
4	GO:0009570: chloroplast stroma	2.36E-04
5	GO:0009528: plastid inner membrane	2.69E-04
6	GO:0016020: membrane	3.54E-04
7	GO:0009941: chloroplast envelope	4.29E-04
8	GO:0009527: plastid outer membrane	5.20E-04
9	GO:0009507: chloroplast	5.40E-04
10	GO:0005778: peroxisomal membrane	5.82E-04
11	GO:0009505: plant-type cell wall	5.89E-04
12	GO:0046658: anchored component of plasma membrane	7.46E-04
13	GO:0048046: apoplast	9.80E-04
14	GO:0045298: tubulin complex	1.65E-03
15	GO:0005763: mitochondrial small ribosomal subunit	1.65E-03
16	GO:0005840: ribosome	2.13E-03
17	GO:0005884: actin filament	2.26E-03
18	GO:0005887: integral component of plasma membrane	2.81E-03
19	GO:0009532: plastid stroma	4.17E-03
20	GO:0005618: cell wall	4.40E-03
21	GO:0005886: plasma membrane	4.71E-03
22	GO:0010319: stromule	8.06E-03
23	GO:0031969: chloroplast membrane	8.30E-03
24	GO:0005576: extracellular region	1.00E-02
25	GO:0009707: chloroplast outer membrane	1.05E-02
26	GO:0015934: large ribosomal subunit	1.17E-02
27	GO:0005783: endoplasmic reticulum	1.18E-02
28	GO:0009536: plastid	1.25E-02
29	GO:0031977: thylakoid lumen	1.40E-02
30	GO:0005789: endoplasmic reticulum membrane	1.66E-02
31	GO:0022626: cytosolic ribosome	2.09E-02
32	GO:0009534: chloroplast thylakoid	2.64E-02
33	GO:0009543: chloroplast thylakoid lumen	2.77E-02