Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G51400

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
2GO:1902171: regulation of tocopherol cyclase activity0.00E+00
3GO:1901918: negative regulation of exoribonuclease activity0.00E+00
4GO:1905255: regulation of RNA binding transcription factor activity0.00E+00
5GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
6GO:0090627: plant epidermal cell differentiation0.00E+00
7GO:0015717: triose phosphate transport0.00E+00
8GO:0015979: photosynthesis7.61E-18
9GO:0015995: chlorophyll biosynthetic process2.34E-10
10GO:0009768: photosynthesis, light harvesting in photosystem I4.94E-06
11GO:0010205: photoinhibition6.19E-05
12GO:0000476: maturation of 4.5S rRNA6.91E-05
13GO:0000967: rRNA 5'-end processing6.91E-05
14GO:0010480: microsporocyte differentiation6.91E-05
15GO:0006782: protoporphyrinogen IX biosynthetic process7.43E-05
16GO:0019684: photosynthesis, light reaction8.80E-05
17GO:0034470: ncRNA processing1.66E-04
18GO:0035304: regulation of protein dephosphorylation1.66E-04
19GO:0035436: triose phosphate transmembrane transport2.81E-04
20GO:0009734: auxin-activated signaling pathway5.36E-04
21GO:0040008: regulation of growth5.37E-04
22GO:0009765: photosynthesis, light harvesting5.42E-04
23GO:0015713: phosphoglycerate transport5.42E-04
24GO:0009755: hormone-mediated signaling pathway5.42E-04
25GO:0009735: response to cytokinin6.65E-04
26GO:0010438: cellular response to sulfur starvation6.87E-04
27GO:0042549: photosystem II stabilization8.40E-04
28GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway8.40E-04
29GO:0009228: thiamine biosynthetic process8.40E-04
30GO:0009913: epidermal cell differentiation8.40E-04
31GO:0009643: photosynthetic acclimation8.40E-04
32GO:0018298: protein-chromophore linkage8.92E-04
33GO:0031930: mitochondria-nucleus signaling pathway9.99E-04
34GO:0009942: longitudinal axis specification9.99E-04
35GO:0010189: vitamin E biosynthetic process9.99E-04
36GO:0034599: cellular response to oxidative stress1.16E-03
37GO:0048437: floral organ development1.17E-03
38GO:0010196: nonphotochemical quenching1.17E-03
39GO:0009769: photosynthesis, light harvesting in photosystem II1.17E-03
40GO:0009645: response to low light intensity stimulus1.17E-03
41GO:0009819: drought recovery1.34E-03
42GO:0009642: response to light intensity1.34E-03
43GO:0010439: regulation of glucosinolate biosynthetic process1.34E-03
44GO:2000070: regulation of response to water deprivation1.34E-03
45GO:0050821: protein stabilization1.34E-03
46GO:0010114: response to red light1.42E-03
47GO:0009657: plastid organization1.53E-03
48GO:0007389: pattern specification process1.53E-03
49GO:0009644: response to high light intensity1.54E-03
50GO:0045454: cell redox homeostasis1.59E-03
51GO:0009245: lipid A biosynthetic process1.73E-03
52GO:0006783: heme biosynthetic process1.73E-03
53GO:0006779: porphyrin-containing compound biosynthetic process1.93E-03
54GO:0009698: phenylpropanoid metabolic process2.36E-03
55GO:0009773: photosynthetic electron transport in photosystem I2.36E-03
56GO:0009682: induced systemic resistance2.36E-03
57GO:0043085: positive regulation of catalytic activity2.36E-03
58GO:0018119: peptidyl-cysteine S-nitrosylation2.36E-03
59GO:0048229: gametophyte development2.36E-03
60GO:0010105: negative regulation of ethylene-activated signaling pathway2.58E-03
61GO:0010075: regulation of meristem growth2.82E-03
62GO:0009767: photosynthetic electron transport chain2.82E-03
63GO:0009934: regulation of meristem structural organization3.06E-03
64GO:0010207: photosystem II assembly3.06E-03
65GO:0010030: positive regulation of seed germination3.30E-03
66GO:0006289: nucleotide-excision repair3.81E-03
67GO:0007017: microtubule-based process4.08E-03
68GO:0009269: response to desiccation4.35E-03
69GO:0016114: terpenoid biosynthetic process4.35E-03
70GO:0009625: response to insect4.91E-03
71GO:0009789: positive regulation of abscisic acid-activated signaling pathway5.50E-03
72GO:0048653: anther development5.80E-03
73GO:0042631: cellular response to water deprivation5.80E-03
74GO:0042335: cuticle development5.80E-03
75GO:0009741: response to brassinosteroid6.11E-03
76GO:0006662: glycerol ether metabolic process6.11E-03
77GO:0007018: microtubule-based movement6.42E-03
78GO:0048825: cotyledon development6.74E-03
79GO:0048510: regulation of timing of transition from vegetative to reproductive phase7.07E-03
80GO:0000302: response to reactive oxygen species7.07E-03
81GO:0010583: response to cyclopentenone7.40E-03
82GO:0010252: auxin homeostasis8.08E-03
83GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.15E-03
84GO:0009627: systemic acquired resistance9.87E-03
85GO:0000160: phosphorelay signal transduction system1.14E-02
86GO:0010218: response to far red light1.18E-02
87GO:0007568: aging1.22E-02
88GO:0009637: response to blue light1.30E-02
89GO:0009867: jasmonic acid mediated signaling pathway1.30E-02
90GO:0006629: lipid metabolic process1.31E-02
91GO:0009640: photomorphogenesis1.56E-02
92GO:0009926: auxin polar transport1.56E-02
93GO:0006812: cation transport1.83E-02
94GO:0009736: cytokinin-activated signaling pathway1.92E-02
95GO:0006417: regulation of translation2.07E-02
96GO:0009416: response to light stimulus2.33E-02
97GO:0009740: gibberellic acid mediated signaling pathway2.37E-02
98GO:0006396: RNA processing2.52E-02
99GO:0009742: brassinosteroid mediated signaling pathway2.58E-02
100GO:0009845: seed germination3.07E-02
101GO:0042744: hydrogen peroxide catabolic process3.18E-02
102GO:0006633: fatty acid biosynthetic process3.41E-02
103GO:0007623: circadian rhythm3.65E-02
104GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process3.95E-02
105GO:0009739: response to gibberellin3.95E-02
106GO:0009617: response to bacterium4.14E-02
107GO:0006468: protein phosphorylation4.68E-02
108GO:0042742: defense response to bacterium4.69E-02
109GO:0009826: unidimensional cell growth4.84E-02
110GO:0009658: chloroplast organization4.97E-02
RankGO TermAdjusted P value
1GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
2GO:0045550: geranylgeranyl reductase activity0.00E+00
3GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
4GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
5GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity6.91E-05
6GO:0010242: oxygen evolving activity6.91E-05
7GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity6.91E-05
8GO:0004853: uroporphyrinogen decarboxylase activity6.91E-05
9GO:0008266: poly(U) RNA binding1.36E-04
10GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity1.66E-04
11GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.66E-04
12GO:0031409: pigment binding1.74E-04
13GO:0071917: triose-phosphate transmembrane transporter activity2.81E-04
14GO:0005515: protein binding3.98E-04
15GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor4.06E-04
16GO:0016851: magnesium chelatase activity4.06E-04
17GO:0070628: proteasome binding5.42E-04
18GO:0015120: phosphoglycerate transmembrane transporter activity5.42E-04
19GO:0016168: chlorophyll binding7.30E-04
20GO:0004130: cytochrome-c peroxidase activity8.40E-04
21GO:0031593: polyubiquitin binding8.40E-04
22GO:0031177: phosphopantetheine binding8.40E-04
23GO:0000035: acyl binding9.99E-04
24GO:0004602: glutathione peroxidase activity9.99E-04
25GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.34E-03
26GO:0009672: auxin:proton symporter activity1.93E-03
27GO:0008047: enzyme activator activity2.14E-03
28GO:0047372: acylglycerol lipase activity2.36E-03
29GO:0015035: protein disulfide oxidoreductase activity2.77E-03
30GO:0010329: auxin efflux transmembrane transporter activity2.82E-03
31GO:0004190: aspartic-type endopeptidase activity3.30E-03
32GO:0043130: ubiquitin binding3.81E-03
33GO:0033612: receptor serine/threonine kinase binding4.35E-03
34GO:0015297: antiporter activity4.41E-03
35GO:0003727: single-stranded RNA binding5.20E-03
36GO:0047134: protein-disulfide reductase activity5.50E-03
37GO:0004791: thioredoxin-disulfide reductase activity6.42E-03
38GO:0000156: phosphorelay response regulator activity7.73E-03
39GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.73E-03
40GO:0003684: damaged DNA binding8.08E-03
41GO:0005200: structural constituent of cytoskeleton8.42E-03
42GO:0005509: calcium ion binding9.46E-03
43GO:0030145: manganese ion binding1.22E-02
44GO:0004712: protein serine/threonine/tyrosine kinase activity1.38E-02
45GO:0004185: serine-type carboxypeptidase activity1.56E-02
46GO:0051537: 2 iron, 2 sulfur cluster binding1.65E-02
47GO:0043621: protein self-association1.65E-02
48GO:0008289: lipid binding1.82E-02
49GO:0016298: lipase activity1.97E-02
50GO:0003777: microtubule motor activity2.07E-02
51GO:0008017: microtubule binding3.77E-02
52GO:0008168: methyltransferase activity4.84E-02
53GO:0004601: peroxidase activity4.97E-02
RankGO TermAdjusted P value
1GO:0005943: phosphatidylinositol 3-kinase complex, class IA0.00E+00
2GO:0009534: chloroplast thylakoid3.13E-30
3GO:0009535: chloroplast thylakoid membrane1.25E-25
4GO:0009507: chloroplast1.13E-20
5GO:0009579: thylakoid1.51E-16
6GO:0009941: chloroplast envelope2.33E-15
7GO:0009538: photosystem I reaction center1.90E-12
8GO:0010287: plastoglobule9.79E-12
9GO:0009570: chloroplast stroma1.09E-10
10GO:0030095: chloroplast photosystem II1.85E-08
11GO:0009543: chloroplast thylakoid lumen2.90E-08
12GO:0031977: thylakoid lumen7.86E-08
13GO:0009522: photosystem I2.52E-07
14GO:0009654: photosystem II oxygen evolving complex4.94E-06
15GO:0019898: extrinsic component of membrane1.76E-05
16GO:0009783: photosystem II antenna complex6.91E-05
17GO:0030093: chloroplast photosystem I1.66E-04
18GO:0010007: magnesium chelatase complex2.81E-04
19GO:0042646: plastid nucleoid4.06E-04
20GO:0009523: photosystem II4.53E-04
21GO:0009517: PSII associated light-harvesting complex II5.42E-04
22GO:0030660: Golgi-associated vesicle membrane5.42E-04
23GO:0071556: integral component of lumenal side of endoplasmic reticulum membrane5.42E-04
24GO:0055035: plastid thylakoid membrane6.87E-04
25GO:0016363: nuclear matrix9.99E-04
26GO:0009533: chloroplast stromal thylakoid1.17E-03
27GO:0031969: chloroplast membrane1.27E-03
28GO:0071458: integral component of cytoplasmic side of endoplasmic reticulum membrane1.34E-03
29GO:0045298: tubulin complex1.73E-03
30GO:0005765: lysosomal membrane2.36E-03
31GO:0009706: chloroplast inner membrane2.69E-03
32GO:0016020: membrane2.98E-03
33GO:0030076: light-harvesting complex3.30E-03
34GO:0005871: kinesin complex5.50E-03
35GO:0005874: microtubule8.55E-03
36GO:0016021: integral component of membrane1.36E-02
37GO:0010008: endosome membrane2.22E-02
38GO:0005623: cell2.96E-02
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Gene type



Gene DE type