GO Enrichment Analysis of Co-expressed Genes with
AT1G51110
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0061635: regulation of protein complex stability | 0.00E+00 |
| 3 | GO:0035970: peptidyl-threonine dephosphorylation | 0.00E+00 |
| 4 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 5 | GO:0015979: photosynthesis | 5.61E-06 |
| 6 | GO:0010207: photosystem II assembly | 6.46E-06 |
| 7 | GO:0015994: chlorophyll metabolic process | 1.03E-05 |
| 8 | GO:0019252: starch biosynthetic process | 4.56E-05 |
| 9 | GO:0071482: cellular response to light stimulus | 8.11E-05 |
| 10 | GO:0010027: thylakoid membrane organization | 8.92E-05 |
| 11 | GO:0010206: photosystem II repair | 1.00E-04 |
| 12 | GO:1904966: positive regulation of vitamin E biosynthetic process | 1.08E-04 |
| 13 | GO:1904964: positive regulation of phytol biosynthetic process | 1.08E-04 |
| 14 | GO:0065002: intracellular protein transmembrane transport | 1.08E-04 |
| 15 | GO:0006106: fumarate metabolic process | 1.08E-04 |
| 16 | GO:1902458: positive regulation of stomatal opening | 1.08E-04 |
| 17 | GO:0010028: xanthophyll cycle | 1.08E-04 |
| 18 | GO:0034337: RNA folding | 1.08E-04 |
| 19 | GO:0019646: aerobic electron transport chain | 1.08E-04 |
| 20 | GO:0043953: protein transport by the Tat complex | 1.08E-04 |
| 21 | GO:0009773: photosynthetic electron transport in photosystem I | 1.69E-04 |
| 22 | GO:0035304: regulation of protein dephosphorylation | 2.52E-04 |
| 23 | GO:1900871: chloroplast mRNA modification | 2.52E-04 |
| 24 | GO:0018026: peptidyl-lysine monomethylation | 2.52E-04 |
| 25 | GO:0080009: mRNA methylation | 2.52E-04 |
| 26 | GO:0016122: xanthophyll metabolic process | 2.52E-04 |
| 27 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 2.52E-04 |
| 28 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 2.52E-04 |
| 29 | GO:0006518: peptide metabolic process | 4.19E-04 |
| 30 | GO:0016050: vesicle organization | 4.19E-04 |
| 31 | GO:1902448: positive regulation of shade avoidance | 4.19E-04 |
| 32 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 6.01E-04 |
| 33 | GO:0080170: hydrogen peroxide transmembrane transport | 6.01E-04 |
| 34 | GO:0005975: carbohydrate metabolic process | 6.66E-04 |
| 35 | GO:0030104: water homeostasis | 7.98E-04 |
| 36 | GO:0010021: amylopectin biosynthetic process | 7.98E-04 |
| 37 | GO:0010109: regulation of photosynthesis | 7.98E-04 |
| 38 | GO:0009765: photosynthesis, light harvesting | 7.98E-04 |
| 39 | GO:0045727: positive regulation of translation | 7.98E-04 |
| 40 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.01E-03 |
| 41 | GO:0042549: photosystem II stabilization | 1.23E-03 |
| 42 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1.23E-03 |
| 43 | GO:0006655: phosphatidylglycerol biosynthetic process | 1.23E-03 |
| 44 | GO:0042372: phylloquinone biosynthetic process | 1.47E-03 |
| 45 | GO:0009942: longitudinal axis specification | 1.47E-03 |
| 46 | GO:1901259: chloroplast rRNA processing | 1.47E-03 |
| 47 | GO:0009631: cold acclimation | 1.82E-03 |
| 48 | GO:2000070: regulation of response to water deprivation | 2.00E-03 |
| 49 | GO:0005978: glycogen biosynthetic process | 2.00E-03 |
| 50 | GO:0009642: response to light intensity | 2.00E-03 |
| 51 | GO:0032544: plastid translation | 2.28E-03 |
| 52 | GO:0007389: pattern specification process | 2.28E-03 |
| 53 | GO:0010205: photoinhibition | 2.88E-03 |
| 54 | GO:0019684: photosynthesis, light reaction | 3.53E-03 |
| 55 | GO:1903507: negative regulation of nucleic acid-templated transcription | 3.53E-03 |
| 56 | GO:0046856: phosphatidylinositol dephosphorylation | 3.53E-03 |
| 57 | GO:0005983: starch catabolic process | 3.87E-03 |
| 58 | GO:0016024: CDP-diacylglycerol biosynthetic process | 3.87E-03 |
| 59 | GO:0006108: malate metabolic process | 4.23E-03 |
| 60 | GO:0071732: cellular response to nitric oxide | 4.96E-03 |
| 61 | GO:0006636: unsaturated fatty acid biosynthetic process | 5.35E-03 |
| 62 | GO:2000377: regulation of reactive oxygen species metabolic process | 5.75E-03 |
| 63 | GO:0008299: isoprenoid biosynthetic process | 6.15E-03 |
| 64 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 6.99E-03 |
| 65 | GO:0035428: hexose transmembrane transport | 6.99E-03 |
| 66 | GO:0071369: cellular response to ethylene stimulus | 7.42E-03 |
| 67 | GO:0006012: galactose metabolic process | 7.42E-03 |
| 68 | GO:0009306: protein secretion | 7.87E-03 |
| 69 | GO:0009735: response to cytokinin | 8.20E-03 |
| 70 | GO:0034220: ion transmembrane transport | 8.79E-03 |
| 71 | GO:0042335: cuticle development | 8.79E-03 |
| 72 | GO:0046323: glucose import | 9.26E-03 |
| 73 | GO:0071472: cellular response to salt stress | 9.26E-03 |
| 74 | GO:0010305: leaf vascular tissue pattern formation | 9.26E-03 |
| 75 | GO:0000302: response to reactive oxygen species | 1.07E-02 |
| 76 | GO:0010583: response to cyclopentenone | 1.12E-02 |
| 77 | GO:1901657: glycosyl compound metabolic process | 1.18E-02 |
| 78 | GO:0030163: protein catabolic process | 1.18E-02 |
| 79 | GO:0071281: cellular response to iron ion | 1.18E-02 |
| 80 | GO:0009567: double fertilization forming a zygote and endosperm | 1.23E-02 |
| 81 | GO:0010252: auxin homeostasis | 1.23E-02 |
| 82 | GO:0055085: transmembrane transport | 1.24E-02 |
| 83 | GO:0042128: nitrate assimilation | 1.51E-02 |
| 84 | GO:0015995: chlorophyll biosynthetic process | 1.56E-02 |
| 85 | GO:0018298: protein-chromophore linkage | 1.68E-02 |
| 86 | GO:0034599: cellular response to oxidative stress | 2.05E-02 |
| 87 | GO:0006099: tricarboxylic acid cycle | 2.05E-02 |
| 88 | GO:0006631: fatty acid metabolic process | 2.25E-02 |
| 89 | GO:0009926: auxin polar transport | 2.38E-02 |
| 90 | GO:0008152: metabolic process | 2.64E-02 |
| 91 | GO:0006855: drug transmembrane transport | 2.66E-02 |
| 92 | GO:0031347: regulation of defense response | 2.73E-02 |
| 93 | GO:0006364: rRNA processing | 2.94E-02 |
| 94 | GO:0009409: response to cold | 3.28E-02 |
| 95 | GO:0009742: brassinosteroid mediated signaling pathway | 3.94E-02 |
| 96 | GO:0009611: response to wounding | 4.32E-02 |
| 97 | GO:0042744: hydrogen peroxide catabolic process | 4.86E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010303: limit dextrinase activity | 0.00E+00 |
| 2 | GO:0046422: violaxanthin de-epoxidase activity | 0.00E+00 |
| 3 | GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity | 0.00E+00 |
| 4 | GO:0051060: pullulanase activity | 0.00E+00 |
| 5 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 6 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 7 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 6.05E-07 |
| 8 | GO:0004856: xylulokinase activity | 1.08E-04 |
| 9 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 1.08E-04 |
| 10 | GO:0004333: fumarate hydratase activity | 1.08E-04 |
| 11 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 1.08E-04 |
| 12 | GO:0010242: oxygen evolving activity | 1.08E-04 |
| 13 | GO:0047746: chlorophyllase activity | 2.52E-04 |
| 14 | GO:0016868: intramolecular transferase activity, phosphotransferases | 2.52E-04 |
| 15 | GO:0033201: alpha-1,4-glucan synthase activity | 2.52E-04 |
| 16 | GO:0004312: fatty acid synthase activity | 2.52E-04 |
| 17 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 2.52E-04 |
| 18 | GO:0008266: poly(U) RNA binding | 2.55E-04 |
| 19 | GO:0016787: hydrolase activity | 3.36E-04 |
| 20 | GO:0003955: NAD(P)H dehydrogenase (quinone) activity | 4.19E-04 |
| 21 | GO:0004751: ribose-5-phosphate isomerase activity | 4.19E-04 |
| 22 | GO:0070402: NADPH binding | 4.19E-04 |
| 23 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 4.19E-04 |
| 24 | GO:0004373: glycogen (starch) synthase activity | 4.19E-04 |
| 25 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 6.01E-04 |
| 26 | GO:0019201: nucleotide kinase activity | 6.01E-04 |
| 27 | GO:0016851: magnesium chelatase activity | 6.01E-04 |
| 28 | GO:0016853: isomerase activity | 7.52E-04 |
| 29 | GO:0009011: starch synthase activity | 7.98E-04 |
| 30 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 7.98E-04 |
| 31 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 7.98E-04 |
| 32 | GO:0016279: protein-lysine N-methyltransferase activity | 7.98E-04 |
| 33 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.98E-04 |
| 34 | GO:0043495: protein anchor | 7.98E-04 |
| 35 | GO:0019843: rRNA binding | 8.04E-04 |
| 36 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.01E-03 |
| 37 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.23E-03 |
| 38 | GO:0004556: alpha-amylase activity | 1.23E-03 |
| 39 | GO:0004130: cytochrome-c peroxidase activity | 1.23E-03 |
| 40 | GO:0042578: phosphoric ester hydrolase activity | 1.23E-03 |
| 41 | GO:0004017: adenylate kinase activity | 1.47E-03 |
| 42 | GO:0019899: enzyme binding | 1.73E-03 |
| 43 | GO:0004034: aldose 1-epimerase activity | 2.00E-03 |
| 44 | GO:0009672: auxin:proton symporter activity | 2.88E-03 |
| 45 | GO:0047372: acylglycerol lipase activity | 3.53E-03 |
| 46 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 3.87E-03 |
| 47 | GO:0031072: heat shock protein binding | 4.23E-03 |
| 48 | GO:0010329: auxin efflux transmembrane transporter activity | 4.23E-03 |
| 49 | GO:0003954: NADH dehydrogenase activity | 5.75E-03 |
| 50 | GO:0005528: FK506 binding | 5.75E-03 |
| 51 | GO:0003714: transcription corepressor activity | 5.75E-03 |
| 52 | GO:0022891: substrate-specific transmembrane transporter activity | 7.42E-03 |
| 53 | GO:0003756: protein disulfide isomerase activity | 7.87E-03 |
| 54 | GO:0005355: glucose transmembrane transporter activity | 9.74E-03 |
| 55 | GO:0050662: coenzyme binding | 9.74E-03 |
| 56 | GO:0019901: protein kinase binding | 1.02E-02 |
| 57 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 1.07E-02 |
| 58 | GO:0042802: identical protein binding | 1.07E-02 |
| 59 | GO:0015250: water channel activity | 1.39E-02 |
| 60 | GO:0016168: chlorophyll binding | 1.45E-02 |
| 61 | GO:0004721: phosphoprotein phosphatase activity | 1.56E-02 |
| 62 | GO:0102483: scopolin beta-glucosidase activity | 1.56E-02 |
| 63 | GO:0008236: serine-type peptidase activity | 1.62E-02 |
| 64 | GO:0004222: metalloendopeptidase activity | 1.80E-02 |
| 65 | GO:0005515: protein binding | 1.86E-02 |
| 66 | GO:0030145: manganese ion binding | 1.86E-02 |
| 67 | GO:0003746: translation elongation factor activity | 1.99E-02 |
| 68 | GO:0008422: beta-glucosidase activity | 2.12E-02 |
| 69 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.66E-02 |
| 70 | GO:0022857: transmembrane transporter activity | 3.63E-02 |
| 71 | GO:0051082: unfolded protein binding | 3.78E-02 |
| 72 | GO:0016746: transferase activity, transferring acyl groups | 3.86E-02 |
| 73 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 4.52E-02 |
| 74 | GO:0004252: serine-type endopeptidase activity | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043235: receptor complex | 0.00E+00 |
| 2 | GO:0009507: chloroplast | 4.33E-41 |
| 3 | GO:0009534: chloroplast thylakoid | 1.94E-25 |
| 4 | GO:0009535: chloroplast thylakoid membrane | 5.38E-21 |
| 5 | GO:0009570: chloroplast stroma | 7.73E-20 |
| 6 | GO:0009941: chloroplast envelope | 4.00E-14 |
| 7 | GO:0009579: thylakoid | 7.09E-12 |
| 8 | GO:0009543: chloroplast thylakoid lumen | 1.53E-10 |
| 9 | GO:0031977: thylakoid lumen | 8.94E-09 |
| 10 | GO:0010287: plastoglobule | 1.64E-07 |
| 11 | GO:0033281: TAT protein transport complex | 2.29E-06 |
| 12 | GO:0045239: tricarboxylic acid cycle enzyme complex | 1.08E-04 |
| 13 | GO:0031361: integral component of thylakoid membrane | 1.08E-04 |
| 14 | GO:0043674: columella | 1.08E-04 |
| 15 | GO:0009508: plastid chromosome | 2.25E-04 |
| 16 | GO:0031304: intrinsic component of mitochondrial inner membrane | 2.52E-04 |
| 17 | GO:0030093: chloroplast photosystem I | 2.52E-04 |
| 18 | GO:0030095: chloroplast photosystem II | 2.55E-04 |
| 19 | GO:0009654: photosystem II oxygen evolving complex | 3.94E-04 |
| 20 | GO:0010007: magnesium chelatase complex | 4.19E-04 |
| 21 | GO:0019898: extrinsic component of membrane | 8.05E-04 |
| 22 | GO:0009295: nucleoid | 1.09E-03 |
| 23 | GO:0042807: central vacuole | 1.73E-03 |
| 24 | GO:0009533: chloroplast stromal thylakoid | 1.73E-03 |
| 25 | GO:0009501: amyloplast | 2.00E-03 |
| 26 | GO:0031969: chloroplast membrane | 2.71E-03 |
| 27 | GO:0032040: small-subunit processome | 3.87E-03 |
| 28 | GO:0016602: CCAAT-binding factor complex | 4.23E-03 |
| 29 | GO:0042651: thylakoid membrane | 6.15E-03 |
| 30 | GO:0009522: photosystem I | 9.74E-03 |
| 31 | GO:0009523: photosystem II | 1.02E-02 |
| 32 | GO:0030529: intracellular ribonucleoprotein complex | 1.39E-02 |
| 33 | GO:0005840: ribosome | 2.38E-02 |
| 34 | GO:0009536: plastid | 2.90E-02 |
| 35 | GO:0016021: integral component of membrane | 3.38E-02 |
| 36 | GO:0009706: chloroplast inner membrane | 3.78E-02 |