Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G50040

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032268: regulation of cellular protein metabolic process0.00E+00
2GO:0006792: regulation of sulfur utilization0.00E+00
3GO:0010200: response to chitin4.01E-08
4GO:0009751: response to salicylic acid1.35E-07
5GO:0009753: response to jasmonic acid3.57E-06
6GO:0009873: ethylene-activated signaling pathway6.11E-06
7GO:0030162: regulation of proteolysis3.68E-05
8GO:0010411: xyloglucan metabolic process5.59E-05
9GO:0006355: regulation of transcription, DNA-templated7.25E-05
10GO:0051973: positive regulation of telomerase activity7.58E-05
11GO:0080164: regulation of nitric oxide metabolic process7.58E-05
12GO:0055063: sulfate ion homeostasis7.58E-05
13GO:0046500: S-adenosylmethionine metabolic process7.58E-05
14GO:0042542: response to hydrogen peroxide1.28E-04
15GO:0034605: cellular response to heat1.55E-04
16GO:0009723: response to ethylene1.80E-04
17GO:0071497: cellular response to freezing1.81E-04
18GO:0051592: response to calcium ion1.81E-04
19GO:0009409: response to cold1.88E-04
20GO:2000022: regulation of jasmonic acid mediated signaling pathway2.96E-04
21GO:0010581: regulation of starch biosynthetic process3.05E-04
22GO:0006556: S-adenosylmethionine biosynthetic process3.05E-04
23GO:0019722: calcium-mediated signaling3.52E-04
24GO:0000271: polysaccharide biosynthetic process4.12E-04
25GO:0009743: response to carbohydrate4.41E-04
26GO:0009741: response to brassinosteroid4.44E-04
27GO:0009737: response to abscisic acid4.95E-04
28GO:0046345: abscisic acid catabolic process5.87E-04
29GO:0006357: regulation of transcription from RNA polymerase II promoter5.89E-04
30GO:0030154: cell differentiation6.41E-04
31GO:0009828: plant-type cell wall loosening6.56E-04
32GO:0009733: response to auxin6.76E-04
33GO:0007267: cell-cell signaling6.95E-04
34GO:0010438: cellular response to sulfur starvation7.44E-04
35GO:0009164: nucleoside catabolic process7.44E-04
36GO:0006544: glycine metabolic process7.44E-04
37GO:0009788: negative regulation of abscisic acid-activated signaling pathway8.20E-04
38GO:0009738: abscisic acid-activated signaling pathway8.70E-04
39GO:0060918: auxin transport9.07E-04
40GO:0006563: L-serine metabolic process9.07E-04
41GO:0006555: methionine metabolic process9.07E-04
42GO:0009611: response to wounding9.44E-04
43GO:0009612: response to mechanical stimulus1.08E-03
44GO:0009826: unidimensional cell growth1.08E-03
45GO:0051510: regulation of unidimensional cell growth1.26E-03
46GO:0010038: response to metal ion1.26E-03
47GO:0010439: regulation of glucosinolate biosynthetic process1.46E-03
48GO:0042546: cell wall biogenesis1.66E-03
49GO:0044030: regulation of DNA methylation1.66E-03
50GO:2000031: regulation of salicylic acid mediated signaling pathway1.66E-03
51GO:0010099: regulation of photomorphogenesis1.66E-03
52GO:0048574: long-day photoperiodism, flowering1.66E-03
53GO:0051865: protein autoubiquitination1.87E-03
54GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.93E-03
55GO:0006351: transcription, DNA-templated2.06E-03
56GO:0035999: tetrahydrofolate interconversion2.09E-03
57GO:0043069: negative regulation of programmed cell death2.32E-03
58GO:0009414: response to water deprivation2.55E-03
59GO:1903507: negative regulation of nucleic acid-templated transcription2.56E-03
60GO:0000038: very long-chain fatty acid metabolic process2.56E-03
61GO:0016024: CDP-diacylglycerol biosynthetic process2.80E-03
62GO:0018107: peptidyl-threonine phosphorylation3.06E-03
63GO:0010540: basipetal auxin transport3.32E-03
64GO:0010143: cutin biosynthetic process3.32E-03
65GO:0009969: xyloglucan biosynthetic process3.59E-03
66GO:0010167: response to nitrate3.59E-03
67GO:0019953: sexual reproduction4.43E-03
68GO:0016998: cell wall macromolecule catabolic process4.73E-03
69GO:0006730: one-carbon metabolic process5.03E-03
70GO:0040007: growth5.34E-03
71GO:0009831: plant-type cell wall modification involved in multidimensional cell growth5.34E-03
72GO:0009739: response to gibberellin5.83E-03
73GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process5.83E-03
74GO:0045893: positive regulation of transcription, DNA-templated5.96E-03
75GO:0010182: sugar mediated signaling pathway6.64E-03
76GO:0010268: brassinosteroid homeostasis6.64E-03
77GO:0045489: pectin biosynthetic process6.64E-03
78GO:0009646: response to absence of light6.99E-03
79GO:0009791: post-embryonic development7.34E-03
80GO:0016132: brassinosteroid biosynthetic process7.69E-03
81GO:0002229: defense response to oomycetes7.69E-03
82GO:0010583: response to cyclopentenone8.05E-03
83GO:0009658: chloroplast organization8.06E-03
84GO:0006970: response to osmotic stress8.68E-03
85GO:0009639: response to red or far red light8.79E-03
86GO:0016125: sterol metabolic process8.79E-03
87GO:0019760: glucosinolate metabolic process8.79E-03
88GO:0001666: response to hypoxia9.95E-03
89GO:0046777: protein autophosphorylation1.07E-02
90GO:0048573: photoperiodism, flowering1.12E-02
91GO:0016311: dephosphorylation1.16E-02
92GO:0045454: cell redox homeostasis1.20E-02
93GO:0048767: root hair elongation1.24E-02
94GO:0048527: lateral root development1.33E-02
95GO:0045087: innate immune response1.42E-02
96GO:0016051: carbohydrate biosynthetic process1.42E-02
97GO:0009637: response to blue light1.42E-02
98GO:0016567: protein ubiquitination1.42E-02
99GO:0006629: lipid metabolic process1.48E-02
100GO:0009408: response to heat1.48E-02
101GO:0009651: response to salt stress1.65E-02
102GO:0009644: response to high light intensity1.79E-02
103GO:0031347: regulation of defense response1.94E-02
104GO:0009664: plant-type cell wall organization1.99E-02
105GO:0009734: auxin-activated signaling pathway2.09E-02
106GO:0009809: lignin biosynthetic process2.10E-02
107GO:0006486: protein glycosylation2.10E-02
108GO:0009585: red, far-red light phototransduction2.10E-02
109GO:0046686: response to cadmium ion2.15E-02
110GO:0009909: regulation of flower development2.25E-02
111GO:0009553: embryo sac development2.64E-02
112GO:0018105: peptidyl-serine phosphorylation2.75E-02
113GO:0035556: intracellular signal transduction2.78E-02
114GO:0009742: brassinosteroid mediated signaling pathway2.81E-02
115GO:0042744: hydrogen peroxide catabolic process3.47E-02
116GO:0006633: fatty acid biosynthetic process3.72E-02
117GO:0040008: regulation of growth3.85E-02
118GO:0007623: circadian rhythm3.98E-02
119GO:0010150: leaf senescence3.98E-02
RankGO TermAdjusted P value
1GO:0003700: transcription factor activity, sequence-specific DNA binding2.60E-05
2GO:0043565: sequence-specific DNA binding4.04E-05
3GO:0080132: fatty acid alpha-hydroxylase activity7.58E-05
4GO:0044212: transcription regulatory region DNA binding9.30E-05
5GO:0003712: transcription cofactor activity1.75E-04
6GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting2.73E-04
7GO:0010295: (+)-abscisic acid 8'-hydroxylase activity3.05E-04
8GO:0004478: methionine adenosyltransferase activity3.05E-04
9GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding3.25E-04
10GO:0004402: histone acetyltransferase activity4.12E-04
11GO:0033843: xyloglucan 6-xylosyltransferase activity4.41E-04
12GO:0003677: DNA binding5.10E-04
13GO:0016762: xyloglucan:xyloglucosyl transferase activity5.45E-04
14GO:0004372: glycine hydroxymethyltransferase activity7.44E-04
15GO:0002020: protease binding7.44E-04
16GO:0035252: UDP-xylosyltransferase activity9.07E-04
17GO:0010427: abscisic acid binding9.07E-04
18GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity9.07E-04
19GO:0004366: glycerol-3-phosphate O-acyltransferase activity9.07E-04
20GO:0016798: hydrolase activity, acting on glycosyl bonds9.08E-04
21GO:0016818: hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides1.08E-03
22GO:0005516: calmodulin binding1.68E-03
23GO:0004864: protein phosphatase inhibitor activity2.32E-03
24GO:0031625: ubiquitin protein ligase binding2.37E-03
25GO:0016758: transferase activity, transferring hexosyl groups3.69E-03
26GO:0003714: transcription corepressor activity4.15E-03
27GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity5.03E-03
28GO:0004872: receptor activity7.34E-03
29GO:0016791: phosphatase activity8.79E-03
30GO:0004674: protein serine/threonine kinase activity8.92E-03
31GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity9.17E-03
32GO:0004806: triglyceride lipase activity1.12E-02
33GO:0004871: signal transducer activity1.26E-02
34GO:0016757: transferase activity, transferring glycosyl groups1.68E-02
35GO:0004842: ubiquitin-protein transferase activity1.85E-02
36GO:0004672: protein kinase activity1.99E-02
37GO:0016298: lipase activity2.15E-02
38GO:0015035: protein disulfide oxidoreductase activity2.75E-02
39GO:0016746: transferase activity, transferring acyl groups2.75E-02
40GO:0030170: pyridoxal phosphate binding3.41E-02
41GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.47E-02
RankGO TermAdjusted P value
1GO:0090568: nuclear transcriptional repressor complex0.00E+00
2GO:0048046: apoplast3.69E-04
3GO:0005615: extracellular space7.62E-04
4GO:0019005: SCF ubiquitin ligase complex1.00E-03
5GO:0009505: plant-type cell wall3.72E-03
6GO:0005794: Golgi apparatus4.35E-03
7GO:0015629: actin cytoskeleton5.34E-03
8GO:0005618: cell wall6.11E-03
9GO:0009506: plasmodesma6.25E-03
10GO:0005634: nucleus1.85E-02
11GO:0005886: plasma membrane3.61E-02
12GO:0005576: extracellular region3.64E-02
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Gene type



Gene DE type