GO Enrichment Analysis of Co-expressed Genes with
AT1G49975
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 3 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 4 | GO:0090391: granum assembly | 7.23E-07 |
| 5 | GO:0015995: chlorophyll biosynthetic process | 3.05E-05 |
| 6 | GO:0010480: microsporocyte differentiation | 5.64E-05 |
| 7 | GO:1902458: positive regulation of stomatal opening | 5.64E-05 |
| 8 | GO:0034337: RNA folding | 5.64E-05 |
| 9 | GO:0010207: photosystem II assembly | 1.02E-04 |
| 10 | GO:0015979: photosynthesis | 1.30E-04 |
| 11 | GO:0018026: peptidyl-lysine monomethylation | 1.37E-04 |
| 12 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.37E-04 |
| 13 | GO:1902448: positive regulation of shade avoidance | 2.34E-04 |
| 14 | GO:0006518: peptide metabolic process | 2.34E-04 |
| 15 | GO:0009306: protein secretion | 2.38E-04 |
| 16 | GO:0045038: protein import into chloroplast thylakoid membrane | 5.78E-04 |
| 17 | GO:0010438: cellular response to sulfur starvation | 5.78E-04 |
| 18 | GO:0032543: mitochondrial translation | 5.78E-04 |
| 19 | GO:0009759: indole glucosinolate biosynthetic process | 7.07E-04 |
| 20 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.07E-04 |
| 21 | GO:0006655: phosphatidylglycerol biosynthetic process | 7.07E-04 |
| 22 | GO:1901259: chloroplast rRNA processing | 8.44E-04 |
| 23 | GO:0048437: floral organ development | 9.85E-04 |
| 24 | GO:0010196: nonphotochemical quenching | 9.85E-04 |
| 25 | GO:1900057: positive regulation of leaf senescence | 9.85E-04 |
| 26 | GO:2000070: regulation of response to water deprivation | 1.13E-03 |
| 27 | GO:0005978: glycogen biosynthetic process | 1.13E-03 |
| 28 | GO:0010206: photosystem II repair | 1.45E-03 |
| 29 | GO:0055062: phosphate ion homeostasis | 1.79E-03 |
| 30 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.97E-03 |
| 31 | GO:0048229: gametophyte development | 1.97E-03 |
| 32 | GO:0009773: photosynthetic electron transport in photosystem I | 1.97E-03 |
| 33 | GO:0002213: defense response to insect | 2.16E-03 |
| 34 | GO:0016024: CDP-diacylglycerol biosynthetic process | 2.16E-03 |
| 35 | GO:0010075: regulation of meristem growth | 2.36E-03 |
| 36 | GO:0009934: regulation of meristem structural organization | 2.56E-03 |
| 37 | GO:0071732: cellular response to nitric oxide | 2.76E-03 |
| 38 | GO:0042744: hydrogen peroxide catabolic process | 2.93E-03 |
| 39 | GO:0000162: tryptophan biosynthetic process | 2.97E-03 |
| 40 | GO:0008299: isoprenoid biosynthetic process | 3.40E-03 |
| 41 | GO:0006418: tRNA aminoacylation for protein translation | 3.40E-03 |
| 42 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 3.86E-03 |
| 43 | GO:0071369: cellular response to ethylene stimulus | 4.10E-03 |
| 44 | GO:0048653: anther development | 4.83E-03 |
| 45 | GO:0019252: starch biosynthetic process | 5.61E-03 |
| 46 | GO:0000302: response to reactive oxygen species | 5.88E-03 |
| 47 | GO:0071281: cellular response to iron ion | 6.43E-03 |
| 48 | GO:0010027: thylakoid membrane organization | 7.59E-03 |
| 49 | GO:0007568: aging | 1.01E-02 |
| 50 | GO:0034599: cellular response to oxidative stress | 1.11E-02 |
| 51 | GO:0031347: regulation of defense response | 1.48E-02 |
| 52 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.63E-02 |
| 53 | GO:0009742: brassinosteroid mediated signaling pathway | 2.13E-02 |
| 54 | GO:0006508: proteolysis | 3.07E-02 |
| 55 | GO:0009739: response to gibberellin | 3.27E-02 |
| 56 | GO:0007166: cell surface receptor signaling pathway | 3.32E-02 |
| 57 | GO:0006979: response to oxidative stress | 3.63E-02 |
| 58 | GO:0030154: cell differentiation | 3.92E-02 |
| 59 | GO:0042254: ribosome biogenesis | 4.17E-02 |
| 60 | GO:0080167: response to karrikin | 4.80E-02 |
| 61 | GO:0009409: response to cold | 4.86E-02 |
| 62 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 2 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 3 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 4 | GO:0016851: magnesium chelatase activity | 1.75E-06 |
| 5 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 5.64E-05 |
| 6 | GO:0004856: xylulokinase activity | 5.64E-05 |
| 7 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.37E-04 |
| 8 | GO:0005528: FK506 binding | 1.46E-04 |
| 9 | GO:0070402: NADPH binding | 2.34E-04 |
| 10 | GO:0002161: aminoacyl-tRNA editing activity | 2.34E-04 |
| 11 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 4.56E-04 |
| 12 | GO:0016279: protein-lysine N-methyltransferase activity | 4.56E-04 |
| 13 | GO:0008878: glucose-1-phosphate adenylyltransferase activity | 4.56E-04 |
| 14 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 5.78E-04 |
| 15 | GO:0004130: cytochrome-c peroxidase activity | 7.07E-04 |
| 16 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.28E-03 |
| 17 | GO:0031072: heat shock protein binding | 2.36E-03 |
| 18 | GO:0003714: transcription corepressor activity | 3.18E-03 |
| 19 | GO:0033612: receptor serine/threonine kinase binding | 3.63E-03 |
| 20 | GO:0003756: protein disulfide isomerase activity | 4.34E-03 |
| 21 | GO:0004812: aminoacyl-tRNA ligase activity | 4.58E-03 |
| 22 | GO:0016853: isomerase activity | 5.35E-03 |
| 23 | GO:0004601: peroxidase activity | 5.47E-03 |
| 24 | GO:0019901: protein kinase binding | 5.61E-03 |
| 25 | GO:0008236: serine-type peptidase activity | 8.81E-03 |
| 26 | GO:0004222: metalloendopeptidase activity | 9.78E-03 |
| 27 | GO:0030145: manganese ion binding | 1.01E-02 |
| 28 | GO:0003993: acid phosphatase activity | 1.11E-02 |
| 29 | GO:0004185: serine-type carboxypeptidase activity | 1.29E-02 |
| 30 | GO:0005198: structural molecule activity | 1.40E-02 |
| 31 | GO:0051082: unfolded protein binding | 2.04E-02 |
| 32 | GO:0016746: transferase activity, transferring acyl groups | 2.09E-02 |
| 33 | GO:0008026: ATP-dependent helicase activity | 2.13E-02 |
| 34 | GO:0019843: rRNA binding | 2.40E-02 |
| 35 | GO:0004252: serine-type endopeptidase activity | 2.58E-02 |
| 36 | GO:0005516: calmodulin binding | 2.68E-02 |
| 37 | GO:0008565: protein transporter activity | 2.73E-02 |
| 38 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.87E-02 |
| 39 | GO:0003743: translation initiation factor activity | 3.37E-02 |
| 40 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.58E-02 |
| 41 | GO:0042802: identical protein binding | 3.58E-02 |
| 42 | GO:0016788: hydrolase activity, acting on ester bonds | 4.17E-02 |
| 43 | GO:0016491: oxidoreductase activity | 4.73E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0009507: chloroplast | 6.52E-23 |
| 2 | GO:0009534: chloroplast thylakoid | 9.60E-21 |
| 3 | GO:0009535: chloroplast thylakoid membrane | 7.53E-15 |
| 4 | GO:0009941: chloroplast envelope | 7.84E-14 |
| 5 | GO:0009570: chloroplast stroma | 2.06E-10 |
| 6 | GO:0009579: thylakoid | 4.89E-07 |
| 7 | GO:0009543: chloroplast thylakoid lumen | 5.18E-07 |
| 8 | GO:0010007: magnesium chelatase complex | 7.23E-07 |
| 9 | GO:0033281: TAT protein transport complex | 7.23E-07 |
| 10 | GO:0009515: granal stacked thylakoid | 5.64E-05 |
| 11 | GO:0031977: thylakoid lumen | 6.78E-05 |
| 12 | GO:0030093: chloroplast photosystem I | 1.37E-04 |
| 13 | GO:0010287: plastoglobule | 2.48E-04 |
| 14 | GO:0009295: nucleoid | 4.79E-04 |
| 15 | GO:0031969: chloroplast membrane | 9.16E-04 |
| 16 | GO:0009538: photosystem I reaction center | 1.13E-03 |
| 17 | GO:0008180: COP9 signalosome | 1.45E-03 |
| 18 | GO:0032040: small-subunit processome | 2.16E-03 |
| 19 | GO:0009508: plastid chromosome | 2.36E-03 |
| 20 | GO:0009654: photosystem II oxygen evolving complex | 3.40E-03 |
| 21 | GO:0019898: extrinsic component of membrane | 5.61E-03 |
| 22 | GO:0005840: ribosome | 7.91E-03 |
| 23 | GO:0019005: SCF ubiquitin ligase complex | 9.13E-03 |
| 24 | GO:0000502: proteasome complex | 1.59E-02 |
| 25 | GO:0009536: plastid | 4.41E-02 |