Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G49660

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0009715: chalcone biosynthetic process0.00E+00
2GO:0052889: 9,9'-di-cis-zeta-carotene desaturation to 7,9,7',9'-tetra-cis-lycopene0.00E+00
3GO:0090393: sepal giant cell development0.00E+00
4GO:0036172: thiamine salvage0.00E+00
5GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
6GO:0080093: regulation of photorespiration5.03E-05
7GO:0031998: regulation of fatty acid beta-oxidation5.03E-05
8GO:1902265: abscisic acid homeostasis5.03E-05
9GO:0006659: phosphatidylserine biosynthetic process5.03E-05
10GO:0080167: response to karrikin7.87E-05
11GO:0010275: NAD(P)H dehydrogenase complex assembly1.23E-04
12GO:0009629: response to gravity1.23E-04
13GO:0005977: glycogen metabolic process2.11E-04
14GO:0006011: UDP-glucose metabolic process2.11E-04
15GO:0031022: nuclear migration along microfilament2.11E-04
16GO:0044375: regulation of peroxisome size2.11E-04
17GO:0032877: positive regulation of DNA endoreduplication3.09E-04
18GO:0010148: transpiration3.09E-04
19GO:0042823: pyridoxal phosphate biosynthetic process3.09E-04
20GO:0015743: malate transport4.15E-04
21GO:0051781: positive regulation of cell division4.15E-04
22GO:0048442: sepal development4.15E-04
23GO:0019464: glycine decarboxylation via glycine cleavage system4.15E-04
24GO:0006546: glycine catabolic process4.15E-04
25GO:0006021: inositol biosynthetic process4.15E-04
26GO:0009902: chloroplast relocation4.15E-04
27GO:0006097: glyoxylate cycle5.26E-04
28GO:0009229: thiamine diphosphate biosynthetic process5.26E-04
29GO:0016120: carotene biosynthetic process5.26E-04
30GO:0043097: pyrimidine nucleoside salvage5.26E-04
31GO:0009813: flavonoid biosynthetic process6.32E-04
32GO:0010942: positive regulation of cell death6.44E-04
33GO:0010264: myo-inositol hexakisphosphate biosynthetic process6.44E-04
34GO:0006206: pyrimidine nucleobase metabolic process6.44E-04
35GO:0009228: thiamine biosynthetic process6.44E-04
36GO:1902456: regulation of stomatal opening6.44E-04
37GO:0010119: regulation of stomatal movement6.92E-04
38GO:0009853: photorespiration7.56E-04
39GO:0009854: oxidative photosynthetic carbon pathway7.68E-04
40GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity7.68E-04
41GO:0045926: negative regulation of growth7.68E-04
42GO:0010076: maintenance of floral meristem identity7.68E-04
43GO:0009903: chloroplast avoidance movement7.68E-04
44GO:0031540: regulation of anthocyanin biosynthetic process1.03E-03
45GO:0052543: callose deposition in cell wall1.03E-03
46GO:0016559: peroxisome fission1.03E-03
47GO:0008610: lipid biosynthetic process1.03E-03
48GO:0009787: regulation of abscisic acid-activated signaling pathway1.03E-03
49GO:0071482: cellular response to light stimulus1.17E-03
50GO:0019432: triglyceride biosynthetic process1.32E-03
51GO:0010224: response to UV-B1.32E-03
52GO:0031146: SCF-dependent proteasomal ubiquitin-dependent protein catabolic process1.47E-03
53GO:0010192: mucilage biosynthetic process1.63E-03
54GO:0051555: flavonol biosynthetic process1.63E-03
55GO:0048441: petal development1.63E-03
56GO:0018119: peptidyl-cysteine S-nitrosylation1.79E-03
57GO:0071365: cellular response to auxin stimulus1.96E-03
58GO:0030048: actin filament-based movement2.14E-03
59GO:0006108: malate metabolic process2.14E-03
60GO:0048440: carpel development2.32E-03
61GO:0019253: reductive pentose-phosphate cycle2.32E-03
62GO:0007031: peroxisome organization2.50E-03
63GO:0042343: indole glucosinolate metabolic process2.50E-03
64GO:0005985: sucrose metabolic process2.50E-03
65GO:0009833: plant-type primary cell wall biogenesis2.69E-03
66GO:0006636: unsaturated fatty acid biosynthetic process2.69E-03
67GO:2000377: regulation of reactive oxygen species metabolic process2.88E-03
68GO:0098542: defense response to other organism3.29E-03
69GO:0006366: transcription from RNA polymerase II promoter3.29E-03
70GO:0009411: response to UV3.71E-03
71GO:0040007: growth3.71E-03
72GO:0048443: stamen development3.93E-03
73GO:0019722: calcium-mediated signaling3.93E-03
74GO:0016117: carotenoid biosynthetic process4.15E-03
75GO:0010118: stomatal movement4.37E-03
76GO:0042631: cellular response to water deprivation4.37E-03
77GO:0042335: cuticle development4.37E-03
78GO:0009741: response to brassinosteroid4.60E-03
79GO:0006814: sodium ion transport4.83E-03
80GO:0007059: chromosome segregation4.83E-03
81GO:0009791: post-embryonic development5.07E-03
82GO:0008654: phospholipid biosynthetic process5.07E-03
83GO:0006970: response to osmotic stress5.09E-03
84GO:0007049: cell cycle5.27E-03
85GO:0007264: small GTPase mediated signal transduction5.56E-03
86GO:0010583: response to cyclopentenone5.56E-03
87GO:0042742: defense response to bacterium6.18E-03
88GO:0007267: cell-cell signaling6.33E-03
89GO:0051607: defense response to virus6.59E-03
90GO:0010029: regulation of seed germination7.12E-03
91GO:0048573: photoperiodism, flowering7.68E-03
92GO:0030244: cellulose biosynthetic process8.24E-03
93GO:0010311: lateral root formation8.53E-03
94GO:0009832: plant-type cell wall biogenesis8.53E-03
95GO:0009637: response to blue light9.73E-03
96GO:0016051: carbohydrate biosynthetic process9.73E-03
97GO:0006099: tricarboxylic acid cycle1.00E-02
98GO:0046686: response to cadmium ion1.09E-02
99GO:0009926: auxin polar transport1.16E-02
100GO:0042546: cell wall biogenesis1.20E-02
101GO:0000165: MAPK cascade1.33E-02
102GO:0009735: response to cytokinin1.40E-02
103GO:0009738: abscisic acid-activated signaling pathway1.49E-02
104GO:0051301: cell division1.68E-02
105GO:0051726: regulation of cell cycle1.92E-02
106GO:0009742: brassinosteroid mediated signaling pathway1.92E-02
107GO:0009058: biosynthetic process2.24E-02
108GO:0006633: fatty acid biosynthetic process2.54E-02
109GO:0009414: response to water deprivation3.04E-02
110GO:0071555: cell wall organization3.12E-02
111GO:0009733: response to auxin3.50E-02
112GO:0045944: positive regulation of transcription from RNA polymerase II promoter3.51E-02
113GO:0009723: response to ethylene4.12E-02
114GO:0048366: leaf development4.17E-02
115GO:0009409: response to cold4.21E-02
116GO:0046777: protein autophosphorylation4.54E-02
117GO:0044550: secondary metabolite biosynthetic process4.59E-02
118GO:0005975: carbohydrate metabolic process4.71E-02
RankGO TermAdjusted P value
1GO:0052886: 9,9'-dicis-carotene:quinone oxidoreductase activity0.00E+00
2GO:0008465: glycerate dehydrogenase activity0.00E+00
3GO:0004417: hydroxyethylthiazole kinase activity0.00E+00
4GO:0050281: serine-glyoxylate transaminase activity0.00E+00
5GO:0016719: carotene 7,8-desaturase activity0.00E+00
6GO:0052887: 7,9,9'-tricis-neurosporene:quinone oxidoreductase activity0.00E+00
7GO:0004760: serine-pyruvate transaminase activity0.00E+00
8GO:0047230: flavonol-3-O-glucoside L-rhamnosyltransferase activity0.00E+00
9GO:0016210: naringenin-chalcone synthase activity0.00E+00
10GO:0008962: phosphatidylglycerophosphatase activity0.00E+00
11GO:0008974: phosphoribulokinase activity0.00E+00
12GO:0004512: inositol-3-phosphate synthase activity1.23E-04
13GO:0015367: oxoglutarate:malate antiporter activity1.23E-04
14GO:0003983: UTP:glucose-1-phosphate uridylyltransferase activity2.11E-04
15GO:0001872: (1->3)-beta-D-glucan binding3.09E-04
16GO:0004375: glycine dehydrogenase (decarboxylating) activity3.09E-04
17GO:0008453: alanine-glyoxylate transaminase activity4.15E-04
18GO:0045430: chalcone isomerase activity4.15E-04
19GO:0005515: protein binding4.63E-04
20GO:2001070: starch binding6.44E-04
21GO:0000210: NAD+ diphosphatase activity6.44E-04
22GO:0016615: malate dehydrogenase activity6.44E-04
23GO:0030060: L-malate dehydrogenase activity7.68E-04
24GO:0004849: uridine kinase activity7.68E-04
25GO:0003824: catalytic activity1.34E-03
26GO:0004860: protein kinase inhibitor activity1.79E-03
27GO:0008081: phosphoric diester hydrolase activity2.14E-03
28GO:0008266: poly(U) RNA binding2.32E-03
29GO:0102336: 3-oxo-arachidoyl-CoA synthase activity2.69E-03
30GO:0102337: 3-oxo-cerotoyl-CoA synthase activity2.69E-03
31GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity2.69E-03
32GO:0001046: core promoter sequence-specific DNA binding2.88E-03
33GO:0016760: cellulose synthase (UDP-forming) activity3.71E-03
34GO:0046982: protein heterodimerization activity4.64E-03
35GO:0019901: protein kinase binding5.07E-03
36GO:0016759: cellulose synthase activity6.07E-03
37GO:0008375: acetylglucosaminyltransferase activity7.40E-03
38GO:0009931: calcium-dependent protein serine/threonine kinase activity7.40E-03
39GO:0016757: transferase activity, transferring glycosyl groups7.43E-03
40GO:0030247: polysaccharide binding7.68E-03
41GO:0004693: cyclin-dependent protein serine/threonine kinase activity8.82E-03
42GO:0046983: protein dimerization activity8.92E-03
43GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding9.12E-03
44GO:0051287: NAD binding1.33E-02
45GO:0016787: hydrolase activity1.63E-02
46GO:0080043: quercetin 3-O-glucosyltransferase activity1.73E-02
47GO:0080044: quercetin 7-O-glucosyltransferase activity1.73E-02
48GO:0016746: transferase activity, transferring acyl groups1.88E-02
49GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding2.37E-02
50GO:0015297: antiporter activity2.63E-02
51GO:0008194: UDP-glycosyltransferase activity2.95E-02
52GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.23E-02
53GO:0042802: identical protein binding3.23E-02
54GO:0005215: transporter activity3.45E-02
55GO:0016788: hydrolase activity, acting on ester bonds3.76E-02
56GO:0004672: protein kinase activity4.56E-02
57GO:0052689: carboxylic ester hydrolase activity4.64E-02
RankGO TermAdjusted P value
1GO:0042579: microbody0.00E+00
2GO:0009507: chloroplast2.38E-07
3GO:0042406: extrinsic component of endoplasmic reticulum membrane2.11E-04
4GO:0009509: chromoplast2.11E-04
5GO:0005960: glycine cleavage complex3.09E-04
6GO:0048046: apoplast4.79E-04
7GO:0005777: peroxisome4.97E-04
8GO:0005779: integral component of peroxisomal membrane1.17E-03
9GO:0005765: lysosomal membrane1.79E-03
10GO:0019013: viral nucleocapsid2.14E-03
11GO:0009705: plant-type vacuole membrane3.07E-03
12GO:0009941: chloroplast envelope3.17E-03
13GO:0009570: chloroplast stroma5.67E-03
14GO:0010319: stromule6.33E-03
15GO:0005783: endoplasmic reticulum6.33E-03
16GO:0005778: peroxisomal membrane6.33E-03
17GO:0019005: SCF ubiquitin ligase complex8.24E-03
18GO:0000786: nucleosome9.42E-03
19GO:0005819: spindle1.03E-02
20GO:0031902: late endosome membrane1.10E-02
21GO:0009706: chloroplast inner membrane1.84E-02
22GO:0005623: cell2.20E-02
23GO:0046658: anchored component of plasma membrane3.32E-02
24GO:0005886: plasma membrane4.37E-02
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Gene type



Gene DE type