Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT1G49650

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010275: NAD(P)H dehydrogenase complex assembly5.37E-05
2GO:0009062: fatty acid catabolic process9.50E-05
3GO:0015675: nickel cation transport9.50E-05
4GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition9.50E-05
5GO:2000122: negative regulation of stomatal complex development1.95E-04
6GO:0080110: sporopollenin biosynthetic process2.51E-04
7GO:0045038: protein import into chloroplast thylakoid membrane2.51E-04
8GO:0032957: inositol trisphosphate metabolic process2.51E-04
9GO:0010375: stomatal complex patterning2.51E-04
10GO:0010190: cytochrome b6f complex assembly3.11E-04
11GO:0006086: acetyl-CoA biosynthetic process from pyruvate3.11E-04
12GO:0042549: photosystem II stabilization3.11E-04
13GO:0010374: stomatal complex development4.37E-04
14GO:0006614: SRP-dependent cotranslational protein targeting to membrane4.37E-04
15GO:0008610: lipid biosynthetic process5.05E-04
16GO:0010052: guard cell differentiation5.74E-04
17GO:0010207: photosystem II assembly1.11E-03
18GO:0009695: jasmonic acid biosynthetic process1.47E-03
19GO:0007017: microtubule-based process1.47E-03
20GO:0071555: cell wall organization1.48E-03
21GO:0031408: oxylipin biosynthetic process1.56E-03
22GO:0016998: cell wall macromolecule catabolic process1.56E-03
23GO:0030245: cellulose catabolic process1.66E-03
24GO:0010584: pollen exine formation1.86E-03
25GO:0000413: protein peptidyl-prolyl isomerization2.07E-03
26GO:0006635: fatty acid beta-oxidation2.50E-03
27GO:0010027: thylakoid membrane organization3.21E-03
28GO:0010411: xyloglucan metabolic process3.58E-03
29GO:0042546: cell wall biogenesis5.52E-03
30GO:0006364: rRNA processing6.59E-03
31GO:0006096: glycolytic process7.40E-03
32GO:0009742: brassinosteroid mediated signaling pathway8.77E-03
33GO:0009790: embryo development1.10E-02
34GO:0007166: cell surface receptor signaling pathway1.36E-02
35GO:0009409: response to cold1.38E-02
36GO:0005975: carbohydrate metabolic process1.54E-02
37GO:0009658: chloroplast organization1.68E-02
38GO:0080167: response to karrikin1.96E-02
39GO:0009793: embryo development ending in seed dormancy2.36E-02
40GO:0055114: oxidation-reduction process3.60E-02
41GO:0009416: response to light stimulus3.90E-02
42GO:0009611: response to wounding3.96E-02
43GO:0006457: protein folding4.68E-02
RankGO TermAdjusted P value
1GO:0005048: signal sequence binding0.00E+00
2GO:0004321: fatty-acyl-CoA synthase activity2.08E-05
3GO:0005080: protein kinase C binding2.08E-05
4GO:0008809: carnitine racemase activity2.08E-05
5GO:0015099: nickel cation transmembrane transporter activity5.37E-05
6GO:0047325: inositol tetrakisphosphate 1-kinase activity9.50E-05
7GO:0052726: inositol-1,3,4-trisphosphate 5-kinase activity9.50E-05
8GO:0004165: dodecenoyl-CoA delta-isomerase activity1.42E-04
9GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity1.42E-04
10GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity1.95E-04
11GO:0080032: methyl jasmonate esterase activity1.95E-04
12GO:0003824: catalytic activity2.32E-04
13GO:0003924: GTPase activity2.99E-04
14GO:0080030: methyl indole-3-acetate esterase activity3.11E-04
15GO:0004620: phospholipase activity4.37E-04
16GO:0008312: 7S RNA binding5.05E-04
17GO:0004033: aldo-keto reductase (NADP) activity5.05E-04
18GO:0016207: 4-coumarate-CoA ligase activity6.45E-04
19GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds8.76E-04
20GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.11E-03
21GO:0005525: GTP binding1.15E-03
22GO:0043424: protein histidine kinase binding1.47E-03
23GO:0000287: magnesium ion binding1.55E-03
24GO:0004176: ATP-dependent peptidase activity1.56E-03
25GO:0008810: cellulase activity1.76E-03
26GO:0016491: oxidoreductase activity2.10E-03
27GO:0050662: coenzyme binding2.28E-03
28GO:0016762: xyloglucan:xyloglucosyl transferase activity2.50E-03
29GO:0005200: structural constituent of cytoskeleton2.96E-03
30GO:0008237: metallopeptidase activity2.96E-03
31GO:0016798: hydrolase activity, acting on glycosyl bonds3.58E-03
32GO:0003755: peptidyl-prolyl cis-trans isomerase activity5.97E-03
33GO:0016874: ligase activity8.07E-03
34GO:0004675: transmembrane receptor protein serine/threonine kinase activity1.18E-02
35GO:0004601: peroxidase activity1.68E-02
36GO:0016788: hydrolase activity, acting on ester bonds1.71E-02
37GO:0004871: signal transducer activity2.31E-02
38GO:0016887: ATPase activity3.54E-02
RankGO TermAdjusted P value
1GO:0080085: signal recognition particle, chloroplast targeting5.37E-05
2GO:0015630: microtubule cytoskeleton1.42E-04
3GO:0009507: chloroplast2.43E-04
4GO:0009533: chloroplast stromal thylakoid4.37E-04
5GO:0005786: signal recognition particle, endoplasmic reticulum targeting5.74E-04
6GO:0009535: chloroplast thylakoid membrane7.07E-04
7GO:0046658: anchored component of plasma membrane1.35E-03
8GO:0009941: chloroplast envelope2.15E-03
9GO:0009570: chloroplast stroma3.56E-03
10GO:0031977: thylakoid lumen5.07E-03
11GO:0009579: thylakoid5.99E-03
12GO:0005886: plasma membrane7.35E-03
13GO:0009706: chloroplast inner membrane8.42E-03
14GO:0009543: chloroplast thylakoid lumen9.85E-03
15GO:0009536: plastid1.25E-02
16GO:0005874: microtubule1.91E-02
17GO:0031969: chloroplast membrane1.96E-02
18GO:0005618: cell wall4.03E-02
19GO:0005777: peroxisome4.30E-02
20GO:0009534: chloroplast thylakoid4.46E-02
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Gene type



Gene DE type